CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : CodonNum = 143 & Codon = aAt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4143T143NT2906NnonsynaCtaAt11111118981-8983

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4143T143NaCtaAt111111All0.000021
ORF1ab/nsp4143T143NaCtaAt2323B.1.617.20.000087
ORF1ab/nsp4143T143NaCtaAt2121AY.40.000033
ORF1ab/nsp4143T143NaCtaAt1313AY.580.011797
ORF1ab/nsp4143T143NaCtaAt1111AY.90.000744
ORF1ab/nsp4143T143NaCtaAt66AY.440.000037
ORF1ab/nsp4143T143NaCtaAt55B.1.1.70.000004
ORF1ab/nsp4143T143NaCtaAt44AY.260.000113
ORF1ab/nsp4143T143NaCtaAt44B.1.5260.000094
ORF1ab/nsp4143T143NaCtaAt33AY.50.000062
ORF1ab/nsp4143T143NaCtaAt33B.1.5960.000261
ORF1ab/nsp4143T143NaCtaAt22AY.430.000009
ORF1ab/nsp4143T143NaCtaAt22B.1.5750.000607
ORF1ab/nsp4143T143NaCtaAt11AY.1030.000006
ORF1ab/nsp4143T143NaCtaAt11AY.1200.000037
ORF1ab/nsp4143T143NaCtaAt11AY.230.00007
ORF1ab/nsp4143T143NaCtaAt11AY.70.000196
ORF1ab/nsp4143T143NaCtaAt11B.10.000009
ORF1ab/nsp4143T143NaCtaAt11B.1.10.000018
ORF1ab/nsp4143T143NaCtaAt11B.1.1.1740.003378
ORF1ab/nsp4143T143NaCtaAt11B.1.2220.001692
ORF1ab/nsp4143T143NaCtaAt11B.1.2790.000514
ORF1ab/nsp4143T143NaCtaAt11B.1.360.000146
ORF1ab/nsp4143T143NaCtaAt11B.1.3610.001289
ORF1ab/nsp4143T143NaCtaAt11B.1.5800.004065
ORF1ab/nsp4143T143NaCtaAt11B.1.6370.000073
ORF1ab/nsp4143T143NaCtaAt11P.1.140.000048