CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : CodonNum = 143

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4143T143TT2906TsynacTacG837478590.93858981-8983
ORF1ab/nsp4143T143TT2906TsynacTacA83743440.04107958981-8983
ORF1ab/nsp4143T143TT2906TsynacTacC83741710.02042038981-8983
ORF1ab/nsp4143T143IT2906InonsynaCtaTt3711371118981-8983
ORF1ab/nsp4143T143delT2906deldelACT---14814818981-8983
ORF1ab/nsp4143T143NT2906NnonsynaCtaAt11111118981-8983
ORF1ab/nsp4143T143AT2906AnonsynActGct10710718981-8983
ORF1ab/nsp4143T143MT2906MnonsynaCTaTG252518981-8983
ORF1ab/nsp4143T143ST2906SnonsynActTct1470.58981-8983
ORF1ab/nsp4143T143ST2906SnonsynaCtaGt1470.58981-8983
ORF1ab/nsp4143T143KT2906KnonsynaCTaAA6618981-8983
ORF1ab/nsp4143T143del1T2906del1delacTac-630.58981-8983
ORF1ab/nsp4143T143del1T2906del1delAct-ct620.3333338981-8983
ORF1ab/nsp4143T143del1T2906del1delaCta-t610.1666678981-8983
ORF1ab/nsp4143T143PT2906PnonsynActCct5518981-8983
ORF1ab/nsp4143T143del2T2906del2delACt--t3318981-8983
ORF1ab/nsp4143T143FT2906FnonsynACtTTt1118981-8983

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4143T143TacTacG78598374All0.001503
ORF1ab/nsp4143T143TacTacA3448374All0.000066
ORF1ab/nsp4143T143TacTacC1718374All0.000033
ORF1ab/nsp4143T143TacTacG62686268B.1.2210.445234
ORF1ab/nsp4143T143IaCtaTt37113711All0.00071
ORF1ab/nsp4143T143TacTacG11881188B.1.221.30.99
ORF1ab/nsp4143T143IaCtaTt581581AY.40.000904
ORF1ab/nsp4143T143IaCtaTt578578B.1.1.70.000517
ORF1ab/nsp4143T143IaCtaTt499499AY.430.002211
ORF1ab/nsp4143T143IaCtaTt368368B.1.617.20.001386
ORF1ab/nsp4143T143IaCtaTt351351AY.90.023726
ORF1ab/nsp4143T143TacTacA239281B.1.1.70.000214
ORF1ab/nsp4143T143TacTacC38281B.1.1.70.000034
ORF1ab/nsp4143T143TacTacG4281B.1.1.70.000004
ORF1ab/nsp4143T143TacTacG242242B.1.221.20.971888
ORF1ab/nsp4143T143IaCtaTt183183AY.30.00182
ORF1ab/nsp4143T143delACT---148148All0.000028
ORF1ab/nsp4143T143NaCtaAt111111All0.000021
ORF1ab/nsp4143T143AActGct107107All0.00002
ORF1ab/nsp4143T143IaCtaTt9696B.1.1.2840.01031
ORF1ab/nsp4143T143TacTacG5663B.10.000513
ORF1ab/nsp4143T143TacTacA663B.10.000055
ORF1ab/nsp4143T143TacTacC163B.10.000009
ORF1ab/nsp4143T143delACT---6363B.1.1.70.000056
ORF1ab/nsp4143T143IaCtaTt6262AY.390.001532
ORF1ab/nsp4143T143IaCtaTt6161B.1.1770.000803
ORF1ab/nsp4143T143IaCtaTt5959B.1.258.170.006134
ORF1ab/nsp4143T143IaCtaTt5858B.1.20.000511
ORF1ab/nsp4143T143IaCtaTt4040AY.440.000243
ORF1ab/nsp4143T143IaCtaTt4040AY.99.20.003686
ORF1ab/nsp4143T143AActGct3232AY.440.000195
ORF1ab/nsp4143T143IaCtaTt3030AY.46.40.004935
ORF1ab/nsp4143T143TacTacA1729B.1.617.20.000064
ORF1ab/nsp4143T143TacTacC1029B.1.617.20.000038
ORF1ab/nsp4143T143TacTacG229B.1.617.20.000008
ORF1ab/nsp4143T143MaCTaTG2525All0.000005
ORF1ab/nsp4143T143IaCtaTt2525AY.1030.000155
ORF1ab/nsp4143T143TacTacA2325AY.9.10.001926
ORF1ab/nsp4143T143TacTacC225AY.9.10.000167
ORF1ab/nsp4143T143TacTacG1225B.1.1770.000158
ORF1ab/nsp4143T143TacTacA1125B.1.1770.000145
ORF1ab/nsp4143T143TacTacC225B.1.1770.000026
ORF1ab/nsp4143T143IaCtaTt2424B.10.00022
ORF1ab/nsp4143T143MaCTaTG2424B.1.2210.001705
ORF1ab/nsp4143T143TacTacC2323AY.300.009102
ORF1ab/nsp4143T143IaCtaTt2323AY.470.000715
ORF1ab/nsp4143T143IaCtaTt2323B.1.3510.000684
ORF1ab/nsp4143T143NaCtaAt2323B.1.617.20.000087
ORF1ab/nsp4143T143IaCtaTt2222AY.9.2.10.043478
ORF1ab/nsp4143T143IaCtaTt2222B.1.6280.007752
ORF1ab/nsp4143T143NaCtaAt2121AY.40.000033
ORF1ab/nsp4143T143IaCtaTt2121B.1.1.3710.21875
ORF1ab/nsp4143T143IaCtaTt1919AY.1020.000504
ORF1ab/nsp4143T143TacTacC1919AY.75.10.003426
ORF1ab/nsp4143T143TacTacG1818AY.1030.000112
ORF1ab/nsp4143T143IaCtaTt1818C.360.016393
ORF1ab/nsp4143T143IaCtaTt1717AY.5.40.004704
ORF1ab/nsp4143T143IaCtaTt1717B.1.2210.001208
ORF1ab/nsp4143T143IaCtaTt1717P.10.000268
ORF1ab/nsp4143T143IaCtaTt1616AY.140.001408
ORF1ab/nsp4143T143IaCtaTt1616B.1.10.00029
ORF1ab/nsp4143T143AActGct1515A.23.10.010563
ORF1ab/nsp4143T143IaCtaTt1515AY.250.00009
ORF1ab/nsp4143T143IaCtaTt1515AY.460.001561
ORF1ab/nsp4143T143TacTacC1515B.1.177.770.010893
ORF1ab/nsp4143T143IaCtaTt1515B.1.36.170.007411
ORF1ab/nsp4143T143SActTct714All0.000001
ORF1ab/nsp4143T143SaCtaGt714All0.000001
ORF1ab/nsp4143T143IaCtaTt1414AY.350.003263
ORF1ab/nsp4143T143NaCtaAt1313AY.580.011797
ORF1ab/nsp4143T143TacTacA813P.10.000126
ORF1ab/nsp4143T143TacTacC313P.10.000047
ORF1ab/nsp4143T143TacTacG213P.10.000032
ORF1ab/nsp4143T143delACT---1212AY.40.000019
ORF1ab/nsp4143T143IaCtaTt1111AE.70.916667
ORF1ab/nsp4143T143NaCtaAt1111AY.90.000744
ORF1ab/nsp4143T143TacTacC1010AY.30.000099
ORF1ab/nsp4143T143TacTacG710B.1.10.000127
ORF1ab/nsp4143T143TacTacA210B.1.10.000036
ORF1ab/nsp4143T143TacTacC110B.1.10.000018
ORF1ab/nsp4143T143TacTacG910B.1.2100.01919
ORF1ab/nsp4143T143TacTacC110B.1.2100.002132
ORF1ab/nsp4143T143AActGct99AY.40.000014
ORF1ab/nsp4143T143IaCtaTt99B.1.4270.000454
ORF1ab/nsp4143T143TacTacC79B.1.4290.000165
ORF1ab/nsp4143T143TacTacG29B.1.4290.000047
ORF1ab/nsp4143T143IaCtaTt88AY.200.000311
ORF1ab/nsp4143T143delACT---88AY.430.000035
ORF1ab/nsp4143T143IaCtaTt88AY.50.000165
ORF1ab/nsp4143T143IaCtaTt88AY.60.000329
ORF1ab/nsp4143T143IaCtaTt88AY.980.000632
ORF1ab/nsp4143T143IaCtaTt88B.1.4290.000188
ORF1ab/nsp4143T143IaCtaTt88B.1.617.10.001032
ORF1ab/nsp4143T143AActGct77A.2.5.30.072165
ORF1ab/nsp4143T143IaCtaTt77AY.1180.000439
ORF1ab/nsp4143T143IaCtaTt77AY.75.10.001262
ORF1ab/nsp4143T143IaCtaTt77B.1.1.5190.000278
ORF1ab/nsp4143T143IaCtaTt77B.1.1600.000218
ORF1ab/nsp4143T143TacTacG77B.1.160.320.030043
ORF1ab/nsp4143T143IaCtaTt77B.1.2350.017632
ORF1ab/nsp4143T143TacTacG77B.1.36.10.007982
ORF1ab/nsp4143T143IaCtaTt77B.1.36.10.007982
ORF1ab/nsp4143T143AActGct77B.1.617.20.000026
ORF1ab/nsp4143T143TacTacG37Q.10.000379
ORF1ab/nsp4143T143TacTacC37Q.10.000379
ORF1ab/nsp4143T143TacTacA17Q.10.000126
ORF1ab/nsp4143T143KaCTaAA66All0.000001
ORF1ab/nsp4143T143del1acTac-36All0.000001
ORF1ab/nsp4143T143del1Act-ct26All0
ORF1ab/nsp4143T143del1aCta-t16All0
ORF1ab/nsp4143T143IaCtaTt66AY.130.000966
ORF1ab/nsp4143T143NaCtaAt66AY.440.000037
ORF1ab/nsp4143T143IaCtaTt66AY.690.00112
ORF1ab/nsp4143T143IaCtaTt66AY.920.001724
ORF1ab/nsp4143T143TacTacG46B.1.1600.000125
ORF1ab/nsp4143T143TacTacA26B.1.1600.000062
ORF1ab/nsp4143T143AActGct66B.1.1770.000079
ORF1ab/nsp4143T143delACT---66B.1.1770.000079
ORF1ab/nsp4143T143IaCtaTt66B.1.2580.000399
ORF1ab/nsp4143T143TacTacA56B.1.5260.000118
ORF1ab/nsp4143T143TacTacC16B.1.5260.000024
ORF1ab/nsp4143T143IaCtaTt66B.1.5960.000523
ORF1ab/nsp4143T143AActGct66B.40.013245
ORF1ab/nsp4143T143IaCtaTt66P.1.120.002904
ORF1ab/nsp4143T143PActCct55All0.000001
ORF1ab/nsp4143T143TacTacA35AY.1000.000138
ORF1ab/nsp4143T143TacTacC25AY.1000.000092
ORF1ab/nsp4143T143IaCtaTt55AY.1160.001434
ORF1ab/nsp4143T143IaCtaTt55AY.1190.000177
ORF1ab/nsp4143T143IaCtaTt55AY.260.000142
ORF1ab/nsp4143T143KaCTaAA55AY.40.000008
ORF1ab/nsp4143T143TacTacC45AY.40.000006
ORF1ab/nsp4143T143TacTacA15AY.40.000002
ORF1ab/nsp4143T143delACT---55AY.4.50.000537
ORF1ab/nsp4143T143TacTacA35AY.440.000018
ORF1ab/nsp4143T143TacTacC25AY.440.000012
ORF1ab/nsp4143T143IaCtaTt55AY.540.000477
ORF1ab/nsp4143T143IaCtaTt55AY.9.20.000184
ORF1ab/nsp4143T143NaCtaAt55B.1.1.70.000004
ORF1ab/nsp4143T143IaCtaTt55B.1.177.810.000947
ORF1ab/nsp4143T143TacTacC35B.1.20.000026
ORF1ab/nsp4143T143TacTacA15B.1.20.000009
ORF1ab/nsp4143T143TacTacG15B.1.20.000009
ORF1ab/nsp4143T143IaCtaTt55B.1.3690.001426
ORF1ab/nsp4143T143NaCtaAt44AY.260.000113
ORF1ab/nsp4143T143IaCtaTt44AY.330.000267
ORF1ab/nsp4143T143IaCtaTt44AY.940.001771
ORF1ab/nsp4143T143IaCtaTt44B.1.1.1210.009709
ORF1ab/nsp4143T143TacTacC44B.1.1.2770.003035
ORF1ab/nsp4143T143AActGct44B.1.1.2910.00297
ORF1ab/nsp4143T143del1acTac-24B.1.1.70.000002
ORF1ab/nsp4143T143del1Act-ct24B.1.1.70.000002
ORF1ab/nsp4143T143IaCtaTt44B.1.160.80.005155
ORF1ab/nsp4143T143IaCtaTt44B.1.177.160.002658
ORF1ab/nsp4143T143IaCtaTt44B.1.2400.000862
ORF1ab/nsp4143T143IaCtaTt44B.1.2430.000278
ORF1ab/nsp4143T143IaCtaTt44B.1.3460.005242
ORF1ab/nsp4143T143IaCtaTt44B.1.360.000584
ORF1ab/nsp4143T143NaCtaAt44B.1.5260.000094
ORF1ab/nsp4143T143IaCtaTt44C.370.000464
ORF1ab/nsp4143T143del2ACt--t33All0.000001
ORF1ab/nsp4143T143IaCtaTt33AY.1170.000254
ORF1ab/nsp4143T143IaCtaTt33AY.1200.000112
ORF1ab/nsp4143T143IaCtaTt33AY.230.000209
ORF1ab/nsp4143T143IaCtaTt33AY.320.001597
ORF1ab/nsp4143T143IaCtaTt33AY.39.10.000119
ORF1ab/nsp4143T143IaCtaTt33AY.4.20.000065
ORF1ab/nsp4143T143NaCtaAt33AY.50.000062
ORF1ab/nsp4143T143IaCtaTt33AY.610.000314
ORF1ab/nsp4143T143TacTacC33AY.98.10.000145
ORF1ab/nsp4143T143IaCtaTt33B.1.1.3060.001315
ORF1ab/nsp4143T143IaCtaTt33B.1.1.370.000579
ORF1ab/nsp4143T143AActGct33B.1.1.70.000003
ORF1ab/nsp4143T143delACT---33B.1.177.630.008108
ORF1ab/nsp4143T143IaCtaTt33B.1.2340.000396
ORF1ab/nsp4143T143NaCtaAt33B.1.5960.000261
ORF1ab/nsp4143T143SaCtaGt33B.1.617.20.000011
ORF1ab/nsp4143T143IaCtaTt33P.20.00056
ORF1ab/nsp4143T143delACT---220.111111
ORF1ab/nsp4143T143TacTacA22A.210.00554
ORF1ab/nsp4143T143IaCtaTt22AY.1000.000092
ORF1ab/nsp4143T143IaCtaTt22AY.1060.00067
ORF1ab/nsp4143T143AActGct22AY.1190.000071
ORF1ab/nsp4143T143delACT---22AY.1200.000074
ORF1ab/nsp4143T143delACT---22AY.190.002281
ORF1ab/nsp4143T143TacTacC22AY.200.000078
ORF1ab/nsp4143T143delACT---22AY.250.000012
ORF1ab/nsp4143T143TacTacG12AY.260.000028
ORF1ab/nsp4143T143TacTacC12AY.260.000028
ORF1ab/nsp4143T143IaCtaTt22AY.270.000129
ORF1ab/nsp4143T143IaCtaTt22AY.3.10.000171
ORF1ab/nsp4143T143IaCtaTt22AY.380.000999
ORF1ab/nsp4143T143IaCtaTt22AY.4.50.000215
ORF1ab/nsp4143T143IaCtaTt22AY.420.00008
ORF1ab/nsp4143T143NaCtaAt22AY.430.000009
ORF1ab/nsp4143T143TacTacA22AY.430.000009
ORF1ab/nsp4143T143IaCtaTt22AY.46.60.000144
ORF1ab/nsp4143T143delACT---22AY.50.000041
ORF1ab/nsp4143T143TacTacC12AY.610.000105
ORF1ab/nsp4143T143TacTacG12AY.610.000105
ORF1ab/nsp4143T143IaCtaTt22AY.750.000112
ORF1ab/nsp4143T143IaCtaTt22B.1.1.1380.012121
ORF1ab/nsp4143T143IaCtaTt22B.1.1.2140.000111
ORF1ab/nsp4143T143delACT---22B.1.1.3110.000716
ORF1ab/nsp4143T143IaCtaTt22B.1.1.3110.000716
ORF1ab/nsp4143T143TacTacG22B.1.1.3510.005587
ORF1ab/nsp4143T143SaCtaGt12B.1.1.70.000001
ORF1ab/nsp4143T143SActTct12B.1.1.70.000001
ORF1ab/nsp4143T143delACT---22B.1.177.180.00232
ORF1ab/nsp4143T143TacTacC22B.1.177.210.000153
ORF1ab/nsp4143T143delACT---22B.1.177.40.000422
ORF1ab/nsp4143T143IaCtaTt22B.1.177.520.003515
ORF1ab/nsp4143T143IaCtaTt22B.1.177.730.001133
ORF1ab/nsp4143T143TacTacG22B.1.177.860.000367
ORF1ab/nsp4143T143delACT---22B.1.177.870.001456
ORF1ab/nsp4143T143IaCtaTt22B.1.36.250.004415
ORF1ab/nsp4143T143TacTacA22B.1.36.290.001035
ORF1ab/nsp4143T143TacTacC22B.1.3990.003868
ORF1ab/nsp4143T143IaCtaTt22B.1.4160.002538
ORF1ab/nsp4143T143TacTacC12B.1.4270.00005
ORF1ab/nsp4143T143TacTacA12B.1.4270.00005
ORF1ab/nsp4143T143IaCtaTt22B.1.4700.002809
ORF1ab/nsp4143T143IaCtaTt22B.1.5050.008772
ORF1ab/nsp4143T143TacTacA22B.1.5060.047619
ORF1ab/nsp4143T143IaCtaTt22B.1.5250.000226
ORF1ab/nsp4143T143NaCtaAt22B.1.5750.000607
ORF1ab/nsp4143T143TacTacC22B.1.5750.000607
ORF1ab/nsp4143T143IaCtaTt22B.1.6090.000959
ORF1ab/nsp4143T143delACT---22B.1.617.20.000008
ORF1ab/nsp4143T143AActGct22B.1.6210.000177
ORF1ab/nsp4143T143IaCtaTt22B.1.6210.000177
ORF1ab/nsp4143T143TacTacA22C.320.046512
ORF1ab/nsp4143T143IaCtaTt22D.20.00015
ORF1ab/nsp4143T143IaCtaTt22P.1.150.000465
ORF1ab/nsp4143T143IaCtaTt22P.1.170.000324
ORF1ab/nsp4143T143IaCtaTt22P.1.60.003891
ORF1ab/nsp4143T143IaCtaTt22P.60.006289
ORF1ab/nsp4143T143TacTacA11A.20.000662
ORF1ab/nsp4143T143IaCtaTt11A.2.50.000499
ORF1ab/nsp4143T143FACtTTt11All0
ORF1ab/nsp4143T143IaCtaTt11AU.20.002421
ORF1ab/nsp4143T143IaCtaTt11AY.100.00053
ORF1ab/nsp4143T143NaCtaAt11AY.1030.000006
ORF1ab/nsp4143T143delACT---11AY.1110.000183
ORF1ab/nsp4143T143TacTacG11AY.1140.000231
ORF1ab/nsp4143T143TacTacC11AY.1160.000287
ORF1ab/nsp4143T143NaCtaAt11AY.1200.000037
ORF1ab/nsp4143T143IaCtaTt11AY.160.00038
ORF1ab/nsp4143T143TacTacA11AY.210.001898
ORF1ab/nsp4143T143NaCtaAt11AY.230.00007
ORF1ab/nsp4143T143TacTacG11AY.230.00007
ORF1ab/nsp4143T143AActGct11AY.230.00007
ORF1ab/nsp4143T143TacTacA11AY.23.10.000417
ORF1ab/nsp4143T143IaCtaTt11AY.240.000431
ORF1ab/nsp4143T143AActGct11AY.290.000016
ORF1ab/nsp4143T143IaCtaTt11AY.290.000016
ORF1ab/nsp4143T143AActGct11AY.30.00001
ORF1ab/nsp4143T143IaCtaTt11AY.34.10.00051
ORF1ab/nsp4143T143TacTacA11AY.350.000233
ORF1ab/nsp4143T143IaCtaTt11AY.360.000148
ORF1ab/nsp4143T143delACT---11AY.360.000148
ORF1ab/nsp4143T143IaCtaTt11AY.4.2.10.000149
ORF1ab/nsp4143T143SActTct11AY.430.000004
ORF1ab/nsp4143T143AActGct11AY.430.000004
ORF1ab/nsp4143T143FACtTTt11AY.440.000006
ORF1ab/nsp4143T143SActTct11AY.440.000006
ORF1ab/nsp4143T143IaCtaTt11AY.450.000122
ORF1ab/nsp4143T143IaCtaTt11AY.46.10.001027
ORF1ab/nsp4143T143IaCtaTt11AY.46.20.000635
ORF1ab/nsp4143T143TacTacA11AY.50.000021
ORF1ab/nsp4143T143TacTacC11AY.5.30.000337
ORF1ab/nsp4143T143delACT---11AY.520.000814
ORF1ab/nsp4143T143TacTacC11AY.520.000814
ORF1ab/nsp4143T143IaCtaTt11AY.530.000288
ORF1ab/nsp4143T143AActGct11AY.590.00053
ORF1ab/nsp4143T143AActGct11AY.60.000041
ORF1ab/nsp4143T143TacTacG11AY.620.000436
ORF1ab/nsp4143T143IaCtaTt11AY.680.000274
ORF1ab/nsp4143T143NaCtaAt11AY.70.000196
ORF1ab/nsp4143T143delACT---11AY.720.001361
ORF1ab/nsp4143T143TacTacA11AY.90.000068
ORF1ab/nsp4143T143delACT---11AY.90.000068
ORF1ab/nsp4143T143delACT---11AY.9.20.000037
ORF1ab/nsp4143T143IaCtaTt11AY.930.000273
ORF1ab/nsp4143T143delACT---11AY.950.000761
ORF1ab/nsp4143T143delACT---11AY.990.001049
ORF1ab/nsp4143T143delACT---11AY.99.10.001553
ORF1ab/nsp4143T143IaCtaTt11AZ.30.00152
ORF1ab/nsp4143T143IaCtaTt11B0.000128
ORF1ab/nsp4143T143MaCTaTG11B.10.000009
ORF1ab/nsp4143T143SaCtaGt11B.10.000009
ORF1ab/nsp4143T143NaCtaAt11B.10.000009
ORF1ab/nsp4143T143delACT---11B.10.000009
ORF1ab/nsp4143T143NaCtaAt11B.1.10.000018
ORF1ab/nsp4143T143SActTct11B.1.10.000018
ORF1ab/nsp4143T143TacTacG11B.1.1.1620.029412
ORF1ab/nsp4143T143NaCtaAt11B.1.1.1740.003378
ORF1ab/nsp4143T143IaCtaTt11B.1.1.1980.001468
ORF1ab/nsp4143T143IaCtaTt11B.1.1.2180.007692
ORF1ab/nsp4143T143IaCtaTt11B.1.1.2220.000204
ORF1ab/nsp4143T143TacTacC11B.1.1.2320.001815
ORF1ab/nsp4143T143delACT---11B.1.1.2360.006897
ORF1ab/nsp4143T143IaCtaTt11B.1.1.250.000569
ORF1ab/nsp4143T143PActCct11B.1.1.2530.002506
ORF1ab/nsp4143T143TacTacA11B.1.1.280.000311
ORF1ab/nsp4143T143IaCtaTt11B.1.1.280.000311
ORF1ab/nsp4143T143IaCtaTt11B.1.1.3010.001179
ORF1ab/nsp4143T143TacTacG11B.1.1.3020.002075
ORF1ab/nsp4143T143delACT---11B.1.1.3090.005848
ORF1ab/nsp4143T143AActGct11B.1.1.3260.001761
ORF1ab/nsp4143T143SActTct11B.1.1.3540.004386
ORF1ab/nsp4143T143IaCtaTt11B.1.1.3610.045455
ORF1ab/nsp4143T143SaCtaGt11B.1.1.370.000193
ORF1ab/nsp4143T143AActGct11B.1.1.370.000193
ORF1ab/nsp4143T143delACT---11B.1.1.370.000193
ORF1ab/nsp4143T143delACT---11B.1.1.390.00051
ORF1ab/nsp4143T143TacTacG11B.1.1.390.00051
ORF1ab/nsp4143T143IaCtaTt11B.1.1.4090.002833
ORF1ab/nsp4143T143IaCtaTt11B.1.1.410.006329
ORF1ab/nsp4143T143IaCtaTt11B.1.1.4340.000349
ORF1ab/nsp4143T143IaCtaTt11B.1.1.4510.038462
ORF1ab/nsp4143T143TacTacG11B.1.1.510.001718
ORF1ab/nsp4143T143del2ACt--t11B.1.1.70.000001
ORF1ab/nsp4143T143TacTacA11B.1.1.700.000341
ORF1ab/nsp4143T143IaCtaTt11B.1.110.30.000718
ORF1ab/nsp4143T143IaCtaTt11B.1.1280.000635
ORF1ab/nsp4143T143PActCct11B.1.1600.000031
ORF1ab/nsp4143T143TacTacG11B.1.160.160.000929
ORF1ab/nsp4143T143TacTacG11B.1.160.260.002421
ORF1ab/nsp4143T143del2ACt--t11B.1.1770.000013
ORF1ab/nsp4143T143PActCct11B.1.1770.000013
ORF1ab/nsp4143T143delACT---11B.1.177.100.000878
ORF1ab/nsp4143T143TacTacG11B.1.177.120.000152
ORF1ab/nsp4143T143IaCtaTt11B.1.177.120.000152
ORF1ab/nsp4143T143IaCtaTt11B.1.177.150.000631
ORF1ab/nsp4143T143del2ACt--t11B.1.177.160.000664
ORF1ab/nsp4143T143delACT---11B.1.177.170.000821
ORF1ab/nsp4143T143IaCtaTt11B.1.177.210.000076
ORF1ab/nsp4143T143IaCtaTt11B.1.177.230.003236
ORF1ab/nsp4143T143IaCtaTt11B.1.177.40.000211
ORF1ab/nsp4143T143TacTacG11B.1.177.430.001477
ORF1ab/nsp4143T143TacTacG11B.1.177.440.000519
ORF1ab/nsp4143T143delACT---11B.1.177.540.000606
ORF1ab/nsp4143T143delACT---11B.1.177.560.000668
ORF1ab/nsp4143T143delACT---11B.1.177.690.001484
ORF1ab/nsp4143T143IaCtaTt11B.1.177.70.000165
ORF1ab/nsp4143T143TacTacG11B.1.177.730.000566
ORF1ab/nsp4143T143IaCtaTt11B.1.177.750.001041
ORF1ab/nsp4143T143delACT---11B.1.177.760.002494
ORF1ab/nsp4143T143IaCtaTt11B.1.177.770.000726
ORF1ab/nsp4143T143delACT---11B.1.177.810.000189
ORF1ab/nsp4143T143TacTacG11B.1.177.810.000189
ORF1ab/nsp4143T143TacTacG11B.1.177.840.006667
ORF1ab/nsp4143T143IaCtaTt11B.1.177.860.000183
ORF1ab/nsp4143T143IaCtaTt11B.1.177.90.001332
ORF1ab/nsp4143T143AActGct11B.1.20.000009
ORF1ab/nsp4143T143delACT---11B.1.20.000009
ORF1ab/nsp4143T143IaCtaTt11B.1.214.20.0006
ORF1ab/nsp4143T143IaCtaTt11B.1.221.40.004167
ORF1ab/nsp4143T143NaCtaAt11B.1.2220.001692
ORF1ab/nsp4143T143SActTct11B.1.2360.002053
ORF1ab/nsp4143T143delACT---11B.1.2420.018868
ORF1ab/nsp4143T143TacTacG11B.1.2430.00007
ORF1ab/nsp4143T143del1aCta-t11B.1.2470.014925
ORF1ab/nsp4143T143TacTacG11B.1.2580.000067
ORF1ab/nsp4143T143TacTacG11B.1.258.110.000396
ORF1ab/nsp4143T143delACT---11B.1.258.30.001675
ORF1ab/nsp4143T143NaCtaAt11B.1.2790.000514
ORF1ab/nsp4143T143IaCtaTt11B.1.3430.020833
ORF1ab/nsp4143T143TacTacC11B.1.3510.00003
ORF1ab/nsp4143T143AActGct11B.1.3510.00003
ORF1ab/nsp4143T143NaCtaAt11B.1.360.000146
ORF1ab/nsp4143T143delACT---11B.1.36.170.000494
ORF1ab/nsp4143T143IaCtaTt11B.1.36.180.00042
ORF1ab/nsp4143T143delACT---11B.1.36.180.00042
ORF1ab/nsp4143T143PActCct11B.1.36.310.001751
ORF1ab/nsp4143T143TacTacA11B.1.36.80.001
ORF1ab/nsp4143T143NaCtaAt11B.1.3610.001289
ORF1ab/nsp4143T143IaCtaTt11B.1.3710.001122
ORF1ab/nsp4143T143IaCtaTt11B.1.4000.000429
ORF1ab/nsp4143T143delACT---11B.1.4150.014286
ORF1ab/nsp4143T143AActGct11B.1.4290.000024
ORF1ab/nsp4143T143IaCtaTt11B.1.4530.003236
ORF1ab/nsp4143T143TacTacG11B.1.4730.019231
ORF1ab/nsp4143T143IaCtaTt11B.1.5170.000427
ORF1ab/nsp4143T143PActCct11B.1.5260.000024
ORF1ab/nsp4143T143IaCtaTt11B.1.5260.000024
ORF1ab/nsp4143T143IaCtaTt11B.1.5740.002151
ORF1ab/nsp4143T143delACT---11B.1.5770.000687
ORF1ab/nsp4143T143NaCtaAt11B.1.5800.004065
ORF1ab/nsp4143T143SaCtaGt11B.1.5950.000261
ORF1ab/nsp4143T143TacTacG11B.1.6090.000479
ORF1ab/nsp4143T143AActGct11B.1.617.10.000129
ORF1ab/nsp4143T143SActTct11B.1.617.10.000129
ORF1ab/nsp4143T143del1acTac-11B.1.617.20.000004
ORF1ab/nsp4143T143KaCTaAA11B.1.617.20.000004
ORF1ab/nsp4143T143IaCtaTt11B.1.617.30.002985
ORF1ab/nsp4143T143TacTacG11B.1.6210.000089
ORF1ab/nsp4143T143AActGct11B.1.6230.000536
ORF1ab/nsp4143T143IaCtaTt11B.1.6370.000073
ORF1ab/nsp4143T143NaCtaAt11B.1.6370.000073
ORF1ab/nsp4143T143IaCtaTt11B.1.930.000934
ORF1ab/nsp4143T143delACT---11B.150.017544
ORF1ab/nsp4143T143IaCtaTt11B.30.000831
ORF1ab/nsp4143T143IaCtaTt11C.350.000774
ORF1ab/nsp4143T143IaCtaTt11C.36.10.004149
ORF1ab/nsp4143T143TacTacC11C.370.000116
ORF1ab/nsp4143T143IaCtaTt11C.380.008065
ORF1ab/nsp4143T143TacTacA11D.20.000075
ORF1ab/nsp4143T143IaCtaTt11N.60.007092
ORF1ab/nsp4143T143IaCtaTt11N.80.03125
ORF1ab/nsp4143T143delACT---11P.10.000016
ORF1ab/nsp4143T143AActGct11P.10.000016
ORF1ab/nsp4143T143IaCtaTt11P.1.140.000048
ORF1ab/nsp4143T143NaCtaAt11P.1.140.000048
ORF1ab/nsp4143T143delACT---11Q.10.000126
ORF1ab/nsp4143T143TacTacA11Q.80.000165