CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : CodonNum = 142 & Codon = tGc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4142Y142CY2905CnonsyntActGc36320.8888898978-8980

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4142Y142CtActGc3236All0.000006
ORF1ab/nsp4142Y142CtActGc56B.1.4290.000118
ORF1ab/nsp4142Y142CtActGc55B.1.20.000044
ORF1ab/nsp4142Y142CtActGc33B.1.1.2220.000612
ORF1ab/nsp4142Y142CtActGc33B.1.1.70.000003
ORF1ab/nsp4142Y142CtActGc33B.1.4270.000151
ORF1ab/nsp4142Y142CtActGc22B.1.1.5190.000079
ORF1ab/nsp4142Y142CtActGc22B.1.1770.000026
ORF1ab/nsp4142Y142CtActGc11AY.440.000006
ORF1ab/nsp4142Y142CtActGc11B.10.000009
ORF1ab/nsp4142Y142CtActGc11B.1.10.000018
ORF1ab/nsp4142Y142CtActGc11B.1.1.4160.000905
ORF1ab/nsp4142Y142CtActGc11B.1.1.4320.001266
ORF1ab/nsp4142Y142CtActGc11B.1.5510.00129
ORF1ab/nsp4142Y142CtActGc11B.1.5650.00081
ORF1ab/nsp4142Y142CtActGc11B.1.6090.000479
ORF1ab/nsp4142Y142CtActGc11B.1.6210.000089