CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : CodonNum = 142 & Codon = Cac

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4142Y142HY2905HnonsynTacCac15130.8666678978-8980

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4142Y142HTacCac1315All0.000002
ORF1ab/nsp4142Y142HTacCac33AY.40.000005
ORF1ab/nsp4142Y142HTacCac33B.1.1.70.000003
ORF1ab/nsp4142Y142HTacCac11AY.1030.000006
ORF1ab/nsp4142Y142HTacCac11AY.430.000004
ORF1ab/nsp4142Y142HTacCac11AY.50.000021
ORF1ab/nsp4142Y142HTacCac11B.10.000009
ORF1ab/nsp4142Y142HTacCac11B.1.1.700.000341
ORF1ab/nsp4142Y142HTacCac11B.1.20.000009
ORF1ab/nsp4142Y142HTacCac11B.1.617.20.000004