CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = Y899del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3899Y899delY1717deldelTAC---515115414-5416

Details of the mutation Y899del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3899Y899delTAC---5151All0.00001
ORF1ab/nsp3899Y899delTAC---1717B.1.1.70.000015
ORF1ab/nsp3899Y899delTAC---33AY.250.000018
ORF1ab/nsp3899Y899delTAC---33B.1.20.000026
ORF1ab/nsp3899Y899delTAC---22AY.40.000003
ORF1ab/nsp3899Y899delTAC---22AY.430.000009
ORF1ab/nsp3899Y899delTAC---22B.1.1600.000062
ORF1ab/nsp3899Y899delTAC---22B.1.360.000292
ORF1ab/nsp3899Y899delTAC---11A.2.20.001689
ORF1ab/nsp3899Y899delTAC---11AY.1080.001103
ORF1ab/nsp3899Y899delTAC---11AY.260.000028
ORF1ab/nsp3899Y899delTAC---11AY.440.000006
ORF1ab/nsp3899Y899delTAC---11AY.660.00107
ORF1ab/nsp3899Y899delTAC---11AY.990.001049
ORF1ab/nsp3899Y899delTAC---11B.1.10.000018
ORF1ab/nsp3899Y899delTAC---11B.1.1.1420.017544
ORF1ab/nsp3899Y899delTAC---11B.1.177.160.000664
ORF1ab/nsp3899Y899delTAC---11B.1.177.40.000211
ORF1ab/nsp3899Y899delTAC---11B.1.177.540.000606
ORF1ab/nsp3899Y899delTAC---11B.1.177.830.001481
ORF1ab/nsp3899Y899delTAC---11B.1.258.30.001675
ORF1ab/nsp3899Y899delTAC---11B.1.3190.003049
ORF1ab/nsp3899Y899delTAC---11B.1.617.20.000004
ORF1ab/nsp3899Y899delTAC---11B.150.017544
ORF1ab/nsp3899Y899delTAC---11C.360.000911
ORF1ab/nsp3899Y899delTAC---11P.10.000016
ORF1ab/nsp3899Y899delTAC---11P.1.10.000318
ORF1ab/nsp3899Y899delTAC---11Q.20.000613