CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = Y882Y

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3882Y882YY1700YsyntaCtaT477104771015363-5365

Details of the mutation Y882Y within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3882Y882YtaCtaT4771047710All0.009125
ORF1ab/nsp3882Y882YtaCtaT3478634786AY.290.548701
ORF1ab/nsp3882Y882YtaCtaT20552055B.1.1.70.00184
ORF1ab/nsp3882Y882YtaCtaT19231923AY.40.002993
ORF1ab/nsp3882Y882YtaCtaT14351435B.1.1.2140.079581
ORF1ab/nsp3882Y882YtaCtaT566566AY.29.10.124807
ORF1ab/nsp3882Y882YtaCtaT470470B.1.1600.014658
ORF1ab/nsp3882Y882YtaCtaT408408B.1.617.20.001536
ORF1ab/nsp3882Y882YtaCtaT370370AY.430.001639
ORF1ab/nsp3882Y882YtaCtaT363363AY.1200.013496
ORF1ab/nsp3882Y882YtaCtaT324324B.1.360.047272
ORF1ab/nsp3882Y882YtaCtaT279279B.1.20.002457
ORF1ab/nsp3882Y882YtaCtaT259259AY.250.001558
ORF1ab/nsp3882Y882YtaCtaT232232B.1.177.120.035194
ORF1ab/nsp3882Y882YtaCtaT206206B.10.001887
ORF1ab/nsp3882Y882YtaCtaT197197B.1.4290.004635
ORF1ab/nsp3882Y882YtaCtaT189189AY.740.021857
ORF1ab/nsp3882Y882YtaCtaT150150P.10.002363
ORF1ab/nsp3882Y882YtaCtaT139139D.20.010431
ORF1ab/nsp3882Y882YtaCtaT139139N.60.985816
ORF1ab/nsp3882Y882YtaCtaT136136AY.1030.000844
ORF1ab/nsp3882Y882YtaCtaT132132A.2.50.065868
ORF1ab/nsp3882Y882YtaCtaT124124B.1.4210.925373
ORF1ab/nsp3882Y882YtaCtaT123123AY.440.000749
ORF1ab/nsp3882Y882YtaCtaT113113B.1.4270.005706
ORF1ab/nsp3882Y882YtaCtaT103103B.1.5610.040889
ORF1ab/nsp3882Y882YtaCtaT9999AY.98.10.004795
ORF1ab/nsp3882Y882YtaCtaT9494AY.120.029709
ORF1ab/nsp3882Y882YtaCtaT9191AY.1170.007691
ORF1ab/nsp3882Y882YtaCtaT9090B.1.1770.001185
ORF1ab/nsp3882Y882YtaCtaT8686AY.30.000855
ORF1ab/nsp3882Y882YtaCtaT7878AY.360.011561
ORF1ab/nsp3882Y882YtaCtaT7474AY.930.020208
ORF1ab/nsp3882Y882YtaCtaT7474B.1.4000.031746
ORF1ab/nsp3882Y882YtaCtaT7070B.1.10.00127
ORF1ab/nsp3882Y882YtaCtaT6363P.1.140.003011
ORF1ab/nsp3882Y882YtaCtaT6060AY.1020.001591
ORF1ab/nsp3882Y882YtaCtaT5353AY.390.00131
ORF1ab/nsp3882Y882YtaCtaT4747B.1.2430.00327
ORF1ab/nsp3882Y882YtaCtaT4545B.1.3510.001338
ORF1ab/nsp3882Y882YtaCtaT4242R.10.00378
ORF1ab/nsp3882Y882YtaCtaT3636AY.9.20.001322
ORF1ab/nsp3882Y882YtaCtaT3434B.1.6370.002484
ORF1ab/nsp3882Y882YtaCtaT3030B.1.1.5190.001191
ORF1ab/nsp3882Y882YtaCtaT3030B.1.5260.000705
ORF1ab/nsp3882Y882YtaCtaT3030B.1.6210.002656
ORF1ab/nsp3882Y882YtaCtaT2626AY.1180.001629
ORF1ab/nsp3882Y882YtaCtaT2626AY.470.000809
ORF1ab/nsp3882Y882YtaCtaT2424AY.420.000966
ORF1ab/nsp3882Y882YtaCtaT2323B.1.4560.075163
ORF1ab/nsp3882Y882YtaCtaT2121B.1.5170.008967
ORF1ab/nsp3882Y882YtaCtaT2020AY.270.001294
ORF1ab/nsp3882Y882YtaCtaT1919AY.750.001064
ORF1ab/nsp3882Y882YtaCtaT1919P.1.150.004414
ORF1ab/nsp3882Y882YtaCtaT1818AY.200.0007
ORF1ab/nsp3882Y882YtaCtaT1818AY.340.001745
ORF1ab/nsp3882Y882YtaCtaT1818AY.640.010714
ORF1ab/nsp3882Y882YtaCtaT1818AY.700.003753
ORF1ab/nsp3882Y882YtaCtaT1717AY.260.000481
ORF1ab/nsp3882Y882YtaCtaT1717AY.3.10.001449
ORF1ab/nsp3882Y882YtaCtaT1717B.1.1.4640.025037
ORF1ab/nsp3882Y882YtaCtaT1717B.1.177.70.002803
ORF1ab/nsp3882Y882YtaCtaT1717B.1.177.860.003119
ORF1ab/nsp3882Y882YtaCtaT1717B.1.5750.005158
ORF1ab/nsp3882Y882YtaCtaT1616AY.50.00033
ORF1ab/nsp3882Y882YtaCtaT1616B.1.2210.001137
ORF1ab/nsp3882Y882YtaCtaT1515AY.1000.00069
ORF1ab/nsp3882Y882YtaCtaT1515AY.4.20.000325
ORF1ab/nsp3882Y882YtaCtaT1414AY.99.20.00129
ORF1ab/nsp3882Y882YtaCtaT1414B.1.1.2630.021807
ORF1ab/nsp3882Y882YtaCtaT1414B.1.258.170.001456
ORF1ab/nsp3882Y882YtaCtaT1313AY.4.50.001397
ORF1ab/nsp3882Y882YtaCtaT1313B.1.177.540.007884
ORF1ab/nsp3882Y882YtaCtaT1212A.280.031746
ORF1ab/nsp3882Y882YtaCtaT1212AY.4.10.00885
ORF1ab/nsp3882Y882YtaCtaT1212B.1.1.1890.018154
ORF1ab/nsp3882Y882YtaCtaT1212B.1.2580.000799
ORF1ab/nsp3882Y882YtaCtaT1111AY.1160.003155
ORF1ab/nsp3882Y882YtaCtaT1111AY.790.013317
ORF1ab/nsp3882Y882YtaCtaT1111B.1.466.20.004304
ORF1ab/nsp3882Y882YtaCtaT1111B.1.5490.079137
ORF1ab/nsp3882Y882YtaCtaT1111B.1.617.10.001419
ORF1ab/nsp3882Y882YtaCtaT1111C.370.001277
ORF1ab/nsp3882Y882YtaCtaT1010AY.1110.001832
ORF1ab/nsp3882Y882YtaCtaT1010AY.410.002939
ORF1ab/nsp3882Y882YtaCtaT1010AY.540.000953
ORF1ab/nsp3882Y882YtaCtaT1010B.1.2400.002156
ORF1ab/nsp3882Y882YtaCtaT1010P.1.100.002695
ORF1ab/nsp3882Y882YtaCtaT99AY.1010.004414
ORF1ab/nsp3882Y882YtaCtaT99AY.1060.003014
ORF1ab/nsp3882Y882YtaCtaT99AY.39.10.000357
ORF1ab/nsp3882Y882YtaCtaT99AY.880.007958
ORF1ab/nsp3882Y882YtaCtaT99B.1.3960.006351
ORF1ab/nsp3882Y882YtaCtaT88AY.330.000534
ORF1ab/nsp3882Y882YtaCtaT88AY.610.000838
ORF1ab/nsp3882Y882YtaCtaT88AY.850.003417
ORF1ab/nsp3882Y882YtaCtaT88B.1.1.580.043011
ORF1ab/nsp3882Y882YtaCtaT88B.1.177.240.010363
ORF1ab/nsp3882Y882YtaCtaT88B.1.5960.000697
ORF1ab/nsp3882Y882YtaCtaT77AU.20.016949
ORF1ab/nsp3882Y882YtaCtaT77AY.1190.000247
ORF1ab/nsp3882Y882YtaCtaT77B.1.1.370.00135
ORF1ab/nsp3882Y882YtaCtaT77B.1.36.220.008454
ORF1ab/nsp3882Y882YtaCtaT77B.1.3670.005547
ORF1ab/nsp3882Y882YtaCtaT77B.1.5950.001827
ORF1ab/nsp3882Y882YtaCtaT77Q.80.001154
ORF1ab/nsp3882Y882YtaCtaT66AY.230.000418
ORF1ab/nsp3882Y882YtaCtaT66AY.690.00112
ORF1ab/nsp3882Y882YtaCtaT66B.1.1.2910.004454
ORF1ab/nsp3882Y882YtaCtaT66B.1.1.500.004073
ORF1ab/nsp3882Y882YtaCtaT66B.1.177.560.004005
ORF1ab/nsp3882Y882YtaCtaT66B.1.2340.000792
ORF1ab/nsp3882Y882YtaCtaT66B.1.5670.02
ORF1ab/nsp3882Y882YtaCtaT66B.1.6280.002114
ORF1ab/nsp3882Y882YtaCtaT66B.470.122449
ORF1ab/nsp3882Y882YtaCtaT55AY.1130.000712
ORF1ab/nsp3882Y882YtaCtaT55AY.130.000805
ORF1ab/nsp3882Y882YtaCtaT55AY.140.00044
ORF1ab/nsp3882Y882YtaCtaT55AY.300.001979
ORF1ab/nsp3882Y882YtaCtaT55AY.400.004822
ORF1ab/nsp3882Y882YtaCtaT55AY.450.000608
ORF1ab/nsp3882Y882YtaCtaT55B.1.1.3370.017986
ORF1ab/nsp3882Y882YtaCtaT55B.1.177.50.006211
ORF1ab/nsp3882Y882YtaCtaT55B.1.4280.005102
ORF1ab/nsp3882Y882YtaCtaT55N.40.021277
ORF1ab/nsp3882Y882YtaCtaT55Q.10.000632
ORF1ab/nsp3882Y882YtaCtaT44AY.190.004561
ORF1ab/nsp3882Y882YtaCtaT44AY.240.001724
ORF1ab/nsp3882Y882YtaCtaT44AY.320.00213
ORF1ab/nsp3882Y882YtaCtaT44AY.460.000416
ORF1ab/nsp3882Y882YtaCtaT44AY.480.00186
ORF1ab/nsp3882Y882YtaCtaT44AY.5.30.00135
ORF1ab/nsp3882Y882YtaCtaT44AY.680.001095
ORF1ab/nsp3882Y882YtaCtaT44AY.9.10.000335
ORF1ab/nsp3882Y882YtaCtaT44AY.980.000316
ORF1ab/nsp3882Y882YtaCtaT44B.1.1.130.142857
ORF1ab/nsp3882Y882YtaCtaT44B.1.1.1590.018692
ORF1ab/nsp3882Y882YtaCtaT44B.1.1.2200.007435
ORF1ab/nsp3882Y882YtaCtaT44B.1.1.2220.000816
ORF1ab/nsp3882Y882YtaCtaT44B.1.1.3480.003185
ORF1ab/nsp3882Y882YtaCtaT44B.1.1.4340.001394
ORF1ab/nsp3882Y882YtaCtaT44B.1.1.630.001543
ORF1ab/nsp3882Y882YtaCtaT44B.1.177.150.002524
ORF1ab/nsp3882Y882YtaCtaT44B.1.177.650.002661
ORF1ab/nsp3882Y882YtaCtaT44B.1.36.160.005698
ORF1ab/nsp3882Y882YtaCtaT44B.1.36.290.002069
ORF1ab/nsp3882Y882YtaCtaT44B.1.3690.001141
ORF1ab/nsp3882Y882YtaCtaT44C.350.003096
ORF1ab/nsp3882Y882YtaCtaT44P.1.170.000647
ORF1ab/nsp3882Y882YtaCtaT44Q.30.00058
ORF1ab/nsp3882Y882YtaCtaT44Q.70.004444
ORF1ab/nsp3882Y882YtaCtaT33AY.46.50.000595
ORF1ab/nsp3882Y882YtaCtaT33AY.580.002722
ORF1ab/nsp3882Y882YtaCtaT33AY.60.000123
ORF1ab/nsp3882Y882YtaCtaT33AY.90.000203
ORF1ab/nsp3882Y882YtaCtaT33B0.000383
ORF1ab/nsp3882Y882YtaCtaT33B.1.1.2250.021583
ORF1ab/nsp3882Y882YtaCtaT33B.1.1.2410.006211
ORF1ab/nsp3882Y882YtaCtaT33B.1.1.3280.050847
ORF1ab/nsp3882Y882YtaCtaT33B.1.1.3470.054545
ORF1ab/nsp3882Y882YtaCtaT33B.1.1.3710.03125
ORF1ab/nsp3882Y882YtaCtaT33B.1.1260.003827
ORF1ab/nsp3882Y882YtaCtaT33B.1.177.160.001993
ORF1ab/nsp3882Y882YtaCtaT33B.1.351.20.000908
ORF1ab/nsp3882Y882YtaCtaT33B.1.36.10.003421
ORF1ab/nsp3882Y882YtaCtaT33B.1.4410.028846
ORF1ab/nsp3882Y882YtaCtaT33B.1.5770.002062
ORF1ab/nsp3882Y882YtaCtaT33B.1.5990.010949
ORF1ab/nsp3882Y882YtaCtaT33B.1.90.018519
ORF1ab/nsp3882Y882YtaCtaT33C.380.024194
ORF1ab/nsp3882Y882YtaCtaT33P.1.20.003468
ORF1ab/nsp3882Y882YtaCtaT33P.1.70.000958
ORF1ab/nsp3882Y882YtaCtaT33P.20.00056
ORF1ab/nsp3882Y882YtaCtaT220.111111
ORF1ab/nsp3882Y882YtaCtaT22A.210.00554
ORF1ab/nsp3882Y882YtaCtaT22AY.1100.000225
ORF1ab/nsp3882Y882YtaCtaT22AY.1210.000271
ORF1ab/nsp3882Y882YtaCtaT22AY.160.000759
ORF1ab/nsp3882Y882YtaCtaT22AY.4.30.001684
ORF1ab/nsp3882Y882YtaCtaT22AY.46.30.001867
ORF1ab/nsp3882Y882YtaCtaT22AY.500.001599
ORF1ab/nsp3882Y882YtaCtaT22AY.75.10.000361
ORF1ab/nsp3882Y882YtaCtaT22AY.860.00166
ORF1ab/nsp3882Y882YtaCtaT22AY.900.001369
ORF1ab/nsp3882Y882YtaCtaT22AY.950.001522
ORF1ab/nsp3882Y882YtaCtaT22AY.990.002099
ORF1ab/nsp3882Y882YtaCtaT22B.1.1.1350.00939
ORF1ab/nsp3882Y882YtaCtaT22B.1.1.1410.004024
ORF1ab/nsp3882Y882YtaCtaT22B.1.1.2770.001517
ORF1ab/nsp3882Y882YtaCtaT22B.1.1.3080.023529
ORF1ab/nsp3882Y882YtaCtaT22B.1.1.3170.000823
ORF1ab/nsp3882Y882YtaCtaT22B.1.1.3180.000604
ORF1ab/nsp3882Y882YtaCtaT22B.1.1.4190.014815
ORF1ab/nsp3882Y882YtaCtaT22B.1.130.004751
ORF1ab/nsp3882Y882YtaCtaT22B.1.177.210.000153
ORF1ab/nsp3882Y882YtaCtaT22B.1.177.40.000422
ORF1ab/nsp3882Y882YtaCtaT22B.1.177.440.001038
ORF1ab/nsp3882Y882YtaCtaT22B.1.2060.001631
ORF1ab/nsp3882Y882YtaCtaT22B.1.3360.004878
ORF1ab/nsp3882Y882YtaCtaT22B.1.36.170.000988
ORF1ab/nsp3882Y882YtaCtaT22B.1.36.330.015152
ORF1ab/nsp3882Y882YtaCtaT22B.1.4030.006536
ORF1ab/nsp3882Y882YtaCtaT22B.1.4590.008163
ORF1ab/nsp3882Y882YtaCtaT22B.1.4970.00063
ORF1ab/nsp3882Y882YtaCtaT22B.1.5640.000852
ORF1ab/nsp3882Y882YtaCtaT22B.1.80.003945
ORF1ab/nsp3882Y882YtaCtaT22B.1.9.50.011364
ORF1ab/nsp3882Y882YtaCtaT22B.30.001661
ORF1ab/nsp3882Y882YtaCtaT22P.1.10.000635
ORF1ab/nsp3882Y882YtaCtaT22P.1.120.000968
ORF1ab/nsp3882Y882YtaCtaT22P.1.40.001953
ORF1ab/nsp3882Y882YtaCtaT11A0.000387
ORF1ab/nsp3882Y882YtaCtaT11A.190.009434
ORF1ab/nsp3882Y882YtaCtaT11A.2.5.20.001572
ORF1ab/nsp3882Y882YtaCtaT11A.23.10.000704
ORF1ab/nsp3882Y882YtaCtaT11A.270.001656
ORF1ab/nsp3882Y882YtaCtaT11AE.80.000489
ORF1ab/nsp3882Y882YtaCtaT11AM.40.003571
ORF1ab/nsp3882Y882YtaCtaT11AP.10.001502
ORF1ab/nsp3882Y882YtaCtaT11AT.10.005128
ORF1ab/nsp3882Y882YtaCtaT11AY.100.00053
ORF1ab/nsp3882Y882YtaCtaT11AY.1050.000643
ORF1ab/nsp3882Y882YtaCtaT11AY.1080.001103
ORF1ab/nsp3882Y882YtaCtaT11AY.116.10.000311
ORF1ab/nsp3882Y882YtaCtaT11AY.120.10.000321
ORF1ab/nsp3882Y882YtaCtaT11AY.120.20.001285
ORF1ab/nsp3882Y882YtaCtaT11AY.16.10.00047
ORF1ab/nsp3882Y882YtaCtaT11AY.20.000356
ORF1ab/nsp3882Y882YtaCtaT11AY.280.00189
ORF1ab/nsp3882Y882YtaCtaT11AY.34.10.00051
ORF1ab/nsp3882Y882YtaCtaT11AY.350.000233
ORF1ab/nsp3882Y882YtaCtaT11AY.370.000316
ORF1ab/nsp3882Y882YtaCtaT11AY.380.000499
ORF1ab/nsp3882Y882YtaCtaT11AY.4.2.10.000149
ORF1ab/nsp3882Y882YtaCtaT11AY.46.10.001027
ORF1ab/nsp3882Y882YtaCtaT11AY.46.20.000635
ORF1ab/nsp3882Y882YtaCtaT11AY.46.40.000165
ORF1ab/nsp3882Y882YtaCtaT11AY.46.60.000072
ORF1ab/nsp3882Y882YtaCtaT11AY.5.40.000277
ORF1ab/nsp3882Y882YtaCtaT11AY.520.000814
ORF1ab/nsp3882Y882YtaCtaT11AY.550.000917
ORF1ab/nsp3882Y882YtaCtaT11AY.590.00053
ORF1ab/nsp3882Y882YtaCtaT11AY.600.000938
ORF1ab/nsp3882Y882YtaCtaT11AY.710.000475
ORF1ab/nsp3882Y882YtaCtaT11AY.780.001541
ORF1ab/nsp3882Y882YtaCtaT11AY.840.000437
ORF1ab/nsp3882Y882YtaCtaT11AY.910.00073
ORF1ab/nsp3882Y882YtaCtaT11AY.920.000287
ORF1ab/nsp3882Y882YtaCtaT11AZ.10.000867
ORF1ab/nsp3882Y882YtaCtaT11B.1.1.10.000327
ORF1ab/nsp3882Y882YtaCtaT11B.1.1.100.001115
ORF1ab/nsp3882Y882YtaCtaT11B.1.1.1370.0125
ORF1ab/nsp3882Y882YtaCtaT11B.1.1.1760.000439
ORF1ab/nsp3882Y882YtaCtaT11B.1.1.2160.00089
ORF1ab/nsp3882Y882YtaCtaT11B.1.1.2320.001815
ORF1ab/nsp3882Y882YtaCtaT11B.1.1.2400.004695
ORF1ab/nsp3882Y882YtaCtaT11B.1.1.250.000569
ORF1ab/nsp3882Y882YtaCtaT11B.1.1.2540.011236
ORF1ab/nsp3882Y882YtaCtaT11B.1.1.2610.008621
ORF1ab/nsp3882Y882YtaCtaT11B.1.1.280.000311
ORF1ab/nsp3882Y882YtaCtaT11B.1.1.2840.000107
ORF1ab/nsp3882Y882YtaCtaT11B.1.1.2850.006536
ORF1ab/nsp3882Y882YtaCtaT11B.1.1.3060.000438
ORF1ab/nsp3882Y882YtaCtaT11B.1.1.3070.002532
ORF1ab/nsp3882Y882YtaCtaT11B.1.1.3110.000358
ORF1ab/nsp3882Y882YtaCtaT11B.1.1.3120.001912
ORF1ab/nsp3882Y882YtaCtaT11B.1.1.3690.000446
ORF1ab/nsp3882Y882YtaCtaT11B.1.1.3720.000689
ORF1ab/nsp3882Y882YtaCtaT11B.1.1.3970.002252
ORF1ab/nsp3882Y882YtaCtaT11B.1.1.4480.002033
ORF1ab/nsp3882Y882YtaCtaT11B.1.1.4590.015385
ORF1ab/nsp3882Y882YtaCtaT11B.1.1.460.004367
ORF1ab/nsp3882Y882YtaCtaT11B.1.1.5230.001563
ORF1ab/nsp3882Y882YtaCtaT11B.1.1.5260.003546
ORF1ab/nsp3882Y882YtaCtaT11B.1.1.700.000341
ORF1ab/nsp3882Y882YtaCtaT11B.1.1.80.003584
ORF1ab/nsp3882Y882YtaCtaT11B.1.1.830.00271
ORF1ab/nsp3882Y882YtaCtaT11B.1.1040.00369
ORF1ab/nsp3882Y882YtaCtaT11B.1.1080.005814
ORF1ab/nsp3882Y882YtaCtaT11B.1.1570.002985
ORF1ab/nsp3882Y882YtaCtaT11B.1.160.220.006757
ORF1ab/nsp3882Y882YtaCtaT11B.1.177.170.000821
ORF1ab/nsp3882Y882YtaCtaT11B.1.177.190.001431
ORF1ab/nsp3882Y882YtaCtaT11B.1.177.230.003236
ORF1ab/nsp3882Y882YtaCtaT11B.1.177.300.002513
ORF1ab/nsp3882Y882YtaCtaT11B.1.177.350.000691
ORF1ab/nsp3882Y882YtaCtaT11B.1.177.550.002331
ORF1ab/nsp3882Y882YtaCtaT11B.1.177.570.000281
ORF1ab/nsp3882Y882YtaCtaT11B.1.177.630.002703
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