CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = Y519del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3519Y519del1Y1337del1delTaC-aG210.54274-4276
ORF1ab/nsp3519Y519del1Y1337del1deltaCta-210.54274-4276

Details of the mutation Y519del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3519Y519del1TaC-aG12All0
ORF1ab/nsp3519Y519del1taCta-12All0
ORF1ab/nsp3519Y519del1TaC-aG11AY.430.000004
ORF1ab/nsp3519Y519del1taCta-11B.1.177.560.000668