CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp3 | 519 | Y519Y | Y1337Y | syn | taC | taT | 12329 | 12329 | 1 | 4274-4276 |
Details of the mutation Y519Y within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 12329 | 12329 | All | 0.002358 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2938 | 2938 | B.1.1.7 | 0.00263 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1822 | 1822 | AY.75 | 0.102073 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1058 | 1058 | AY.4 | 0.001647 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 729 | 729 | B.1.617.2 | 0.002745 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 531 | 531 | B.1.2 | 0.004676 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 425 | 425 | AY.42 | 0.017098 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 246 | 246 | AY.119 | 0.008686 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 242 | 242 | AY.102 | 0.006416 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 217 | 217 | AY.43 | 0.000961 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 193 | 193 | B.1.351 | 0.005737 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 182 | 182 | B.1.177.86 | 0.033388 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 161 | 161 | P.1 | 0.002536 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 151 | 151 | B.1.177.57 | 0.042428 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 139 | 139 | B.1.177 | 0.00183 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 129 | 129 | AY.12 | 0.040771 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 119 | 119 | AZ.6 | 1 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 117 | 117 | B.1 | 0.001072 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 111 | 111 | AY.103 | 0.000689 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 110 | 110 | AY.46.4 | 0.018095 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 107 | 107 | AY.25 | 0.000644 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 97 | 97 | AY.44 | 0.00059 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 96 | 96 | B.1.258 | 0.006389 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 79 | 79 | B.1.526 | 0.001857 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 69 | 69 | B.1.160 | 0.002152 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 66 | 66 | B.1.1 | 0.001197 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 66 | 66 | B.1.1.284 | 0.007088 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 62 | 62 | B.1.1.222 | 0.012648 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 61 | 61 | AY.26 | 0.001727 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 61 | 61 | B.1.429 | 0.001435 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 58 | 58 | AY.39 | 0.001433 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 53 | 53 | AY.6 | 0.00218 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 52 | 52 | B.1.1.432 | 0.065823 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 50 | 50 | AY.98 | 0.00395 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 48 | 48 | AY.3 | 0.000477 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 45 | 45 | B.1.1.317 | 0.018526 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 45 | 45 | B.1.177.83 | 0.066667 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 45 | 45 | B.1.36 | 0.006566 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 44 | 44 | B.1.1.214 | 0.00244 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 42 | 42 | B.1.1.519 | 0.001668 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 41 | 41 | B.1.1.70 | 0.013984 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 39 | 39 | P.2 | 0.007279 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 37 | 37 | P.1.14 | 0.001769 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 36 | 36 | AY.5 | 0.000743 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 34 | 34 | AY.20 | 0.001321 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 33 | 33 | C.37 | 0.00383 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 29 | 29 | B.1.427 | 0.001464 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 29 | 29 | P.1.17 | 0.004691 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 26 | 26 | B.1.258.17 | 0.002703 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 24 | 24 | AY.46 | 0.002498 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 24 | 24 | B.1.1.170 | 0.029925 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 20 | 20 | AY.27 | 0.001294 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 20 | 20 | B.1.177.60 | 0.004369 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 19 | 19 | AY.85 | 0.008116 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 19 | 19 | B.1.243 | 0.001322 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 19 | 19 | B.1.502 | 1 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 19 | 19 | B.1.617.1 | 0.00245 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 18 | 18 | B.1.609 | 0.008629 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 17 | 17 | AY.100 | 0.000782 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 17 | 17 | AY.4.4 | 0.006956 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 17 | 17 | B.1.595 | 0.004436 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 16 | 16 | AY.29 | 0.000252 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 16 | 16 | AY.39.1 | 0.000634 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 16 | 16 | AY.86 | 0.013278 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 16 | 16 | AY.99.2 | 0.001475 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 16 | 16 | B.1.423 | 0.163265 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 15 | 15 | AY.36 | 0.002223 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 14 | 14 | AY.4.2 | 0.000304 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 14 | 14 | B.1.36.9 | 0.045016 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 14 | 14 | B.1.621 | 0.001239 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 12 | 12 | AY.9.2 | 0.000441 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 12 | 12 | AY.94 | 0.005312 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 12 | 12 | AY.98.1 | 0.000581 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 11 | 11 | AY.120 | 0.000409 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 11 | 11 | B.1.1.326 | 0.019366 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 11 | 11 | B.1.221 | 0.000781 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 11 | 11 | Q.8 | 0.001814 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 10 | 10 | AY.23 | 0.000697 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 10 | 10 | AY.34.1 | 0.005099 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 10 | 10 | AY.45 | 0.001217 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 10 | 10 | B.1.1.406 | 0.064935 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 10 | 10 | B.1.36.29 | 0.005173 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 9 | 9 | AY.116 | 0.002581 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 9 | 9 | AY.118 | 0.000564 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 9 | 9 | AY.33 | 0.000601 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 9 | 9 | B.1.1.419 | 0.066667 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 9 | 9 | B.1.36.18 | 0.003782 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 8 | 8 | AY.106 | 0.002679 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 8 | 8 | AY.47 | 0.000249 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 8 | 8 | AY.73 | 0.005323 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 8 | 8 | B.1.1.318 | 0.002414 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 8 | 8 | B.1.177.4 | 0.001688 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 8 | 8 | B.1.596 | 0.000697 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 8 | 8 | B.1.623 | 0.004292 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 8 | 8 | D.2 | 0.0006 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 7 | 7 | AY.110 | 0.000789 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 7 | 7 | AY.14 | 0.000616 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 7 | 7 | AY.61 | 0.000733 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 7 | 7 | B.1.1.420 | 0.007042 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 7 | 7 | B.1.1.54 | 0.021148 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 7 | 7 | B.1.289 | 0.018617 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 7 | 7 | B.1.466.2 | 0.002739 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 7 | 7 | B.1.562 | 0.12963 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 7 | 7 | B.1.600 | 0.040936 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 6 | 6 | AY.30 | 0.002374 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 6 | 6 | AY.38 | 0.002996 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 6 | 6 | AY.75.1 | 0.001082 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 6 | 6 | B.1.1.1 | 0.00196 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 6 | 6 | B.1.1.39 | 0.003058 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 6 | 6 | B.1.456 | 0.019608 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 6 | 6 | B.1.525 | 0.000679 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 6 | 6 | B.1.597 | 0.027778 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 6 | 6 | B.1.619.1 | 0.003849 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 6 | 6 | Q.1 | 0.000758 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 5 | 5 | AY.54 | 0.000477 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 5 | 5 | AY.64 | 0.002976 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 5 | 5 | AY.68 | 0.001369 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 5 | 5 | AY.74 | 0.000578 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 5 | 5 | B | 0.000639 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 5 | 5 | B.1.1.153 | 0.005476 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 5 | 5 | B.1.1.33 | 0.002104 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 5 | 5 | B.1.23 | 0.030303 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 5 | 5 | B.1.234 | 0.00066 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 5 | 5 | B.1.236 | 0.010267 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 5 | 5 | B.1.497 | 0.001574 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 5 | 5 | B.1.637 | 0.000365 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 4 | 4 | AY.101 | 0.001962 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 4 | 4 | AY.108 | 0.00441 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 4 | 4 | AY.121 | 0.000541 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 4 | 4 | AY.24 | 0.001724 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 4 | 4 | AY.3.1 | 0.000341 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 4 | 4 | AY.46.6 | 0.000289 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 4 | 4 | AY.70 | 0.000834 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 4 | 4 | B.1.1.141 | 0.008048 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 4 | 4 | B.1.1.157 | 0.003653 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 4 | 4 | B.1.1.306 | 0.001754 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 4 | 4 | B.1.1.37 | 0.000771 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 4 | 4 | B.1.1.397 | 0.009009 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 4 | 4 | B.1.1.8 | 0.014337 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 4 | 4 | B.1.177.21 | 0.000306 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 4 | 4 | B.1.177.43 | 0.005908 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 4 | 4 | B.1.177.44 | 0.002076 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 4 | 4 | B.1.177.73 | 0.002265 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 4 | 4 | B.1.36.1 | 0.004561 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 4 | 4 | B.1.561 | 0.001588 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 4 | 4 | P.1.10 | 0.001078 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 4 | 4 | P.1.15 | 0.000929 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 3 | 3 | A.2.5.2 | 0.004717 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 3 | 3 | AY.107 | 0.001398 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 3 | 3 | AY.113 | 0.000427 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 3 | 3 | AY.117 | 0.000254 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 3 | 3 | AY.59 | 0.001589 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 3 | 3 | AY.65 | 0.001599 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 3 | 3 | AY.69 | 0.00056 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 3 | 3 | B.1.1.176 | 0.001318 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 3 | 3 | B.1.1.434 | 0.001046 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 3 | 3 | B.1.1.46 | 0.0131 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 3 | 3 | B.1.1.523 | 0.004687 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 3 | 3 | B.1.177.12 | 0.000455 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 3 | 3 | B.1.177.75 | 0.003122 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 3 | 3 | B.1.177.81 | 0.000568 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 3 | 3 | B.1.177.87 | 0.002183 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 3 | 3 | B.1.240 | 0.000647 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 3 | 3 | B.1.351.2 | 0.000908 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 3 | 3 | B.1.369 | 0.000856 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 3 | 3 | B.1.400 | 0.001287 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 3 | 3 | B.1.409 | 0.002344 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 3 | 3 | B.1.499 | 0.003151 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 3 | 3 | B.1.524 | 0.004219 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 3 | 3 | B.1.577 | 0.002062 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 3 | 3 | P.1.4 | 0.00293 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | 0.111111 | |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | A | 0.000774 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | A.27 | 0.003311 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | AU.2 | 0.004843 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | AY.13 | 0.000322 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | AY.16 | 0.000759 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | AY.16.1 | 0.00094 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | AY.32 | 0.001065 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | AY.4.3 | 0.001684 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | AY.4.5 | 0.000215 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | AY.46.2 | 0.001271 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | AY.5.4 | 0.000553 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | AY.52 | 0.001629 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | AY.7.1 | 0.000225 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | AY.7.2 | 0.001119 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | AY.84 | 0.000875 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | AY.88 | 0.001768 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | AY.89 | 0.009804 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | AY.9.1 | 0.000167 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | AY.92 | 0.000575 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | AY.95 | 0.001522 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | B.1.1.191 | 0.009524 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | B.1.1.311 | 0.000716 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | B.1.1.356 | 0.017094 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | B.1.1.409 | 0.005666 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | B.1.147 | 0.001512 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | B.1.158 | 0.047619 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | B.1.160.16 | 0.001859 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | B.1.177.15 | 0.001262 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | B.1.177.36 | 0.032258 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | B.1.177.58 | 0.002663 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | B.1.177.7 | 0.00033 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | B.1.214.2 | 0.001199 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | B.1.311 | 0.000549 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | B.1.332 | 0.006993 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | B.1.36.16 | 0.002849 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | B.1.36.7 | 0.008 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | B.1.438.1 | 0.000215 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | B.1.459 | 0.008163 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | B.1.466.1 | 0.014388 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | B.1.509 | 0.001732 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | B.1.575 | 0.000607 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | B.1.625 | 0.004706 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | B.6.6 | 0.001778 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | C.36 | 0.001821 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | P.1.2 | 0.002312 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | Q.3 | 0.00029 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 2 | 2 | W.1 | 0.017391 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | AD.2 | 0.000219 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | AU.1 | 0.001266 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | AY.104 | 0.001984 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | AY.109 | 0.00074 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | AY.111 | 0.000183 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | AY.114 | 0.000231 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | AY.21 | 0.001898 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | AY.29.1 | 0.000221 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | AY.35 | 0.000233 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | AY.37 | 0.000316 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | AY.5.3 | 0.000337 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | AY.51 | 0.000909 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | AY.56 | 0.001605 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | AY.57 | 0.000656 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | AY.62 | 0.000436 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | AY.63 | 0.000387 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | AY.67 | 0.000464 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | AY.8 | 0.000606 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | AY.82 | 0.001357 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | AY.9 | 0.000068 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | AY.90 | 0.000684 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | AY.93 | 0.000273 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.1.135 | 0.004695 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.1.161 | 0.003534 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.1.164 | 0.005155 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.1.189 | 0.001513 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.1.216 | 0.00089 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.1.231 | 0.003096 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.1.255 | 0.00303 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.1.28 | 0.000311 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.1.294 | 0.001266 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.1.312 | 0.001912 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.1.316 | 0.000925 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.1.334 | 0.016393 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.1.337 | 0.003597 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.1.348 | 0.000796 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.1.369 | 0.000446 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.1.377 | 0.001381 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.1.385 | 0.004464 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.1.398 | 0.003226 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.1.413 | 0.006897 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.1.53 | 0.013699 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.1.56 | 0.017857 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.1.63 | 0.000386 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.1.89 | 0.006061 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.111 | 0.001175 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.126 | 0.001276 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.157 | 0.002985 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.160.14 | 0.002119 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.160.26 | 0.002421 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.164 | 0.014925 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.177.17 | 0.000821 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.177.33 | 0.001645 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.177.5 | 0.001242 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.177.54 | 0.000606 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.177.82 | 0.000477 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.177.88 | 0.012346 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.195 | 0.005025 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.199 | 0.004132 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.201 | 0.005682 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.206 | 0.000816 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.214.1 | 0.02 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.237 | 0.004975 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.241 | 0.000812 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.242 | 0.018868 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.258.12 | 0.007874 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.265 | 0.001271 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.313 | 0.006579 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.326 | 0.007576 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.35 | 0.008475 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.36.17 | 0.000494 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.36.22 | 0.001208 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.36.27 | 0.000763 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.36.8 | 0.001 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.361 | 0.001289 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.362.2 | 0.004717 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.367 | 0.000792 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.371 | 0.001122 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.391 | 0.001127 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.396 | 0.000706 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.420 | 0.010417 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.433 | 0.003195 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.448 | 0.002625 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.474 | 0.001901 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.478 | 0.011765 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.507 | 0.011236 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.523 | 0.002451 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.527 | 0.003704 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.533 | 0.009615 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.558 | 0.004566 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.570 | 0.002941 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.572 | 0.025 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.578 | 0.017857 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.582 | 0.000491 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.595.3 | 0.026316 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.599 | 0.00365 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.620 | 0.000946 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.621.1 | 0.000506 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.627 | 0.00202 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.628 | 0.000352 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.1.630 | 0.005236 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.47 | 0.020408 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | B.6 | 0.00091 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | C.1.2 | 0.004255 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | C.36.3 | 0.000567 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | C.37.1 | 0.002618 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | C.8 | 0.004464 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | N.4 | 0.004255 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | N.5 | 0.001767 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | N.6 | 0.007092 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | P.1.1 | 0.000318 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | P.1.12 | 0.000484 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | P.1.7 | 0.000319 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | Q.2 | 0.000613 |
ORF1ab/nsp3 | 519 | Y519Y | taC | taT | 1 | 1 | W.2 | 0.004831 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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