CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = Y42C

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp342Y42CY860CnonsyntAttGt252512843-2845

Details of the mutation Y42C within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp342Y42CtAttGt2525All0.000005
ORF1ab/nsp342Y42CtAttGt77AY.690.001307
ORF1ab/nsp342Y42CtAttGt55B.1.617.20.000019
ORF1ab/nsp342Y42CtAttGt33B.1.1.70.000003
ORF1ab/nsp342Y42CtAttGt22AY.1190.000071
ORF1ab/nsp342Y42CtAttGt11A.30.002096
ORF1ab/nsp342Y42CtAttGt11AY.250.000006
ORF1ab/nsp342Y42CtAttGt11AY.40.000002
ORF1ab/nsp342Y42CtAttGt11AY.430.000004
ORF1ab/nsp342Y42CtAttGt11AY.46.60.000072
ORF1ab/nsp342Y42CtAttGt11B.1.20.000009
ORF1ab/nsp342Y42CtAttGt11B.1.4290.000024
ORF1ab/nsp342Y42CtAttGt11B.1.5260.000024