CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = Y1742Y

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31742Y1742YY2560YsyntaCtaT109291092917943-7945

Details of the mutation Y1742Y within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31742Y1742YtaCtaT1092910929All0.00209
ORF1ab/nsp31742Y1742YtaCtaT22602260B.1.1.70.002023
ORF1ab/nsp31742Y1742YtaCtaT16011601B.1.177.210.122429
ORF1ab/nsp31742Y1742YtaCtaT950950AY.40.001479
ORF1ab/nsp31742Y1742YtaCtaT821821P.10.012934
ORF1ab/nsp31742Y1742YtaCtaT462462B.1.20.004068
ORF1ab/nsp31742Y1742YtaCtaT371371AY.50.007661
ORF1ab/nsp31742Y1742YtaCtaT368368B.1.5510.474839
ORF1ab/nsp31742Y1742YtaCtaT274274B.1.617.20.001032
ORF1ab/nsp31742Y1742YtaCtaT192192AY.250.001155
ORF1ab/nsp31742Y1742YtaCtaT185185AY.1030.001149
ORF1ab/nsp31742Y1742YtaCtaT169169AY.30.001681
ORF1ab/nsp31742Y1742YtaCtaT144144AY.430.000638
ORF1ab/nsp31742Y1742YtaCtaT142142B.1.1600.004429
ORF1ab/nsp31742Y1742YtaCtaT137137B.10.001255
ORF1ab/nsp31742Y1742YtaCtaT120120B.1.2430.00835
ORF1ab/nsp31742Y1742YtaCtaT118118AY.440.000718
ORF1ab/nsp31742Y1742YtaCtaT118118AY.750.006611
ORF1ab/nsp31742Y1742YtaCtaT107107AY.260.003029
ORF1ab/nsp31742Y1742YtaCtaT106106B.1.2210.007529
ORF1ab/nsp31742Y1742YtaCtaT9898P.1.111
ORF1ab/nsp31742Y1742YtaCtaT8787AY.390.00215
ORF1ab/nsp31742Y1742YtaCtaT8282B.1.4290.001929
ORF1ab/nsp31742Y1742YtaCtaT8181B.1.10.001469
ORF1ab/nsp31742Y1742YtaCtaT7676AY.1190.002683
ORF1ab/nsp31742Y1742YtaCtaT7676AY.4.20.001648
ORF1ab/nsp31742Y1742YtaCtaT7171B.1.1770.000935
ORF1ab/nsp31742Y1742YtaCtaT6565AY.1210.008796
ORF1ab/nsp31742Y1742YtaCtaT6464B.1.4270.003232
ORF1ab/nsp31742Y1742YtaCtaT5757Q.10.007201
ORF1ab/nsp31742Y1742YtaCtaT5555AY.420.002213
ORF1ab/nsp31742Y1742YtaCtaT5555B.1.1.3340.901639
ORF1ab/nsp31742Y1742YtaCtaT4242AY.60.001727
ORF1ab/nsp31742Y1742YtaCtaT3939B.1.177.600.008519
ORF1ab/nsp31742Y1742YtaCtaT3939B.1.3610.050258
ORF1ab/nsp31742Y1742YtaCtaT3939B.1.5260.000917
ORF1ab/nsp31742Y1742YtaCtaT3333AY.470.001026
ORF1ab/nsp31742Y1742YtaCtaT3131AY.290.000489
ORF1ab/nsp31742Y1742YtaCtaT2929AY.590.01536
ORF1ab/nsp31742Y1742YtaCtaT2828P.1.140.001338
ORF1ab/nsp31742Y1742YtaCtaT2727B.1.36.80.027
ORF1ab/nsp31742Y1742YtaCtaT2525AY.1020.000663
ORF1ab/nsp31742Y1742YtaCtaT2424AY.1200.000892
ORF1ab/nsp31742Y1742YtaCtaT2424Q.80.003958
ORF1ab/nsp31742Y1742YtaCtaT2121AY.230.001465
ORF1ab/nsp31742Y1742YtaCtaT2020A.90.909091
ORF1ab/nsp31742Y1742YtaCtaT2020AY.200.000777
ORF1ab/nsp31742Y1742YtaCtaT2020AY.980.00158
ORF1ab/nsp31742Y1742YtaCtaT1919AY.330.001269
ORF1ab/nsp31742Y1742YtaCtaT1919AY.39.10.000753
ORF1ab/nsp31742Y1742YtaCtaT1818AY.1000.000828
ORF1ab/nsp31742Y1742YtaCtaT1818B.1.1.5190.000715
ORF1ab/nsp31742Y1742YtaCtaT1818B.1.5170.007686
ORF1ab/nsp31742Y1742YtaCtaT1818B.1.5960.001568
ORF1ab/nsp31742Y1742YtaCtaT1717AY.210.032258
ORF1ab/nsp31742Y1742YtaCtaT1717C.370.001973
ORF1ab/nsp31742Y1742YtaCtaT1515B.1.2580.000998
ORF1ab/nsp31742Y1742YtaCtaT1414B.1.177.860.002568
ORF1ab/nsp31742Y1742YtaCtaT1212AY.1180.000752
ORF1ab/nsp31742Y1742YtaCtaT1212AY.46.40.001974
ORF1ab/nsp31742Y1742YtaCtaT1212B.1.177.750.012487
ORF1ab/nsp31742Y1742YtaCtaT1212B.1.5860.131868
ORF1ab/nsp31742Y1742YtaCtaT1111B.1.1.250.006254
ORF1ab/nsp31742Y1742YtaCtaT1111B.1.4220.008936
ORF1ab/nsp31742Y1742YtaCtaT1010AY.540.000953
ORF1ab/nsp31742Y1742YtaCtaT1010B.1.1.1150.089286
ORF1ab/nsp31742Y1742YtaCtaT1010B.1.1.2140.000555
ORF1ab/nsp31742Y1742YtaCtaT1010B.1.1.280.003112
ORF1ab/nsp31742Y1742YtaCtaT1010B.1.1.2940.012658
ORF1ab/nsp31742Y1742YtaCtaT1010B.1.6210.000885
ORF1ab/nsp31742Y1742YtaCtaT99AY.1130.001282
ORF1ab/nsp31742Y1742YtaCtaT99AY.1140.00208
ORF1ab/nsp31742Y1742YtaCtaT99AY.140.000792
ORF1ab/nsp31742Y1742YtaCtaT99AY.3.10.000767
ORF1ab/nsp31742Y1742YtaCtaT99AY.4.2.10.001341
ORF1ab/nsp31742Y1742YtaCtaT99AY.46.60.00065
ORF1ab/nsp31742Y1742YtaCtaT99AY.98.10.000436
ORF1ab/nsp31742Y1742YtaCtaT99P.20.00168
ORF1ab/nsp31742Y1742YtaCtaT88AY.39.20.012327
ORF1ab/nsp31742Y1742YtaCtaT88AY.460.000833
ORF1ab/nsp31742Y1742YtaCtaT88AY.610.000838
ORF1ab/nsp31742Y1742YtaCtaT88AY.75.10.001442
ORF1ab/nsp31742Y1742YtaCtaT88AY.780.012327
ORF1ab/nsp31742Y1742YtaCtaT88B.1.1.4340.002788
ORF1ab/nsp31742Y1742YtaCtaT88B.1.3510.000238
ORF1ab/nsp31742Y1742YtaCtaT88B.1.351.20.002421
ORF1ab/nsp31742Y1742YtaCtaT88P.1.170.001294
ORF1ab/nsp31742Y1742YtaCtaT77AY.9.20.000257
ORF1ab/nsp31742Y1742YtaCtaT77B.1.1.2680.104478
ORF1ab/nsp31742Y1742YtaCtaT77B.1.1.5120.2
ORF1ab/nsp31742Y1742YtaCtaT77B.1.177.20.031818
ORF1ab/nsp31742Y1742YtaCtaT77B.1.360.001021
ORF1ab/nsp31742Y1742YtaCtaT77B.1.4700.009831
ORF1ab/nsp31742Y1742YtaCtaT77B.1.4970.002203
ORF1ab/nsp31742Y1742YtaCtaT77B.1.5950.001827
ORF1ab/nsp31742Y1742YtaCtaT77B.1.6370.000512
ORF1ab/nsp31742Y1742YtaCtaT77C.350.005418
ORF1ab/nsp31742Y1742YtaCtaT77P.1.150.001626
ORF1ab/nsp31742Y1742YtaCtaT66AY.1060.002009
ORF1ab/nsp31742Y1742YtaCtaT66AY.1160.001721
ORF1ab/nsp31742Y1742YtaCtaT66AY.1170.000507
ORF1ab/nsp31742Y1742YtaCtaT66AY.340.000582
ORF1ab/nsp31742Y1742YtaCtaT66AY.7.20.003356
ORF1ab/nsp31742Y1742YtaCtaT66B.1.1.1530.006572
ORF1ab/nsp31742Y1742YtaCtaT66B.1.5750.00182
ORF1ab/nsp31742Y1742YtaCtaT66P.1.120.002904
ORF1ab/nsp31742Y1742YtaCtaT55AY.910.003652
ORF1ab/nsp31742Y1742YtaCtaT55B.1.1.2860.014493
ORF1ab/nsp31742Y1742YtaCtaT55B.1.1.4090.014164
ORF1ab/nsp31742Y1742YtaCtaT55B.1.1.5210.026738
ORF1ab/nsp31742Y1742YtaCtaT55B.1.177.770.003631
ORF1ab/nsp31742Y1742YtaCtaT55B.1.2340.00066
ORF1ab/nsp31742Y1742YtaCtaT55B.1.5250.000566
ORF1ab/nsp31742Y1742YtaCtaT55C.360.004554
ORF1ab/nsp31742Y1742YtaCtaT44AY.360.000593
ORF1ab/nsp31742Y1742YtaCtaT44AY.450.000487
ORF1ab/nsp31742Y1742YtaCtaT44AY.920.001149
ORF1ab/nsp31742Y1742YtaCtaT44B0.000511
ORF1ab/nsp31742Y1742YtaCtaT44B.1.1.2650.012618
ORF1ab/nsp31742Y1742YtaCtaT44B.1.1.2840.00043
ORF1ab/nsp31742Y1742YtaCtaT44B.1.1.3170.001647
ORF1ab/nsp31742Y1742YtaCtaT44B.1.177.40.000844
ORF1ab/nsp31742Y1742YtaCtaT44B.1.177.790.009368
ORF1ab/nsp31742Y1742YtaCtaT44B.1.5820.001963
ORF1ab/nsp31742Y1742YtaCtaT44B.1.6090.001918
ORF1ab/nsp31742Y1742YtaCtaT44B.1.6180.016129
ORF1ab/nsp31742Y1742YtaCtaT44P.1.160.001496
ORF1ab/nsp31742Y1742YtaCtaT33A.20.001985
ORF1ab/nsp31742Y1742YtaCtaT33A.2.50.001497
ORF1ab/nsp31742Y1742YtaCtaT33A.280.007937
ORF1ab/nsp31742Y1742YtaCtaT33AY.1100.000338
ORF1ab/nsp31742Y1742YtaCtaT33AY.160.001139
ORF1ab/nsp31742Y1742YtaCtaT33AY.20.001068
ORF1ab/nsp31742Y1742YtaCtaT33AY.270.000194
ORF1ab/nsp31742Y1742YtaCtaT33AY.29.10.000662
ORF1ab/nsp31742Y1742YtaCtaT33AY.370.000948
ORF1ab/nsp31742Y1742YtaCtaT33AY.380.001498
ORF1ab/nsp31742Y1742YtaCtaT33AY.710.001425
ORF1ab/nsp31742Y1742YtaCtaT33B.1.1.1610.010601
ORF1ab/nsp31742Y1742YtaCtaT33B.1.1.1700.003741
ORF1ab/nsp31742Y1742YtaCtaT33B.1.1.4480.006098
ORF1ab/nsp31742Y1742YtaCtaT33B.1.1.700.001023
ORF1ab/nsp31742Y1742YtaCtaT33B.1.160.150.014851
ORF1ab/nsp31742Y1742YtaCtaT33B.1.177.170.002463
ORF1ab/nsp31742Y1742YtaCtaT33B.1.177.330.004934
ORF1ab/nsp31742Y1742YtaCtaT33B.1.3490.002144
ORF1ab/nsp31742Y1742YtaCtaT33B.1.36.260.008571
ORF1ab/nsp31742Y1742YtaCtaT33B.1.3750.002459
ORF1ab/nsp31742Y1742YtaCtaT33B.1.438.10.000322
ORF1ab/nsp31742Y1742YtaCtaT33B.1.4990.003151
ORF1ab/nsp31742Y1742YtaCtaT33B.1.5090.002597
ORF1ab/nsp31742Y1742YtaCtaT33B.1.5380.024194
ORF1ab/nsp31742Y1742YtaCtaT33B.1.617.10.000387
ORF1ab/nsp31742Y1742YtaCtaT33B.450.011494
ORF1ab/nsp31742Y1742YtaCtaT33C.160.003181
ORF1ab/nsp31742Y1742YtaCtaT33C.36.30.001702
ORF1ab/nsp31742Y1742YtaCtaT33D.20.000225
ORF1ab/nsp31742Y1742YtaCtaT33P.1.10.000953
ORF1ab/nsp31742Y1742YtaCtaT33P.50.041096
ORF1ab/nsp31742Y1742YtaCtaT33R.10.00027
ORF1ab/nsp31742Y1742YtaCtaT22A.50.003846
ORF1ab/nsp31742Y1742YtaCtaT22AD.20.000438
ORF1ab/nsp31742Y1742YtaCtaT22AU.30.004219
ORF1ab/nsp31742Y1742YtaCtaT22AY.1040.003968
ORF1ab/nsp31742Y1742YtaCtaT22AY.120.000632
ORF1ab/nsp31742Y1742YtaCtaT22AY.46.30.001867
ORF1ab/nsp31742Y1742YtaCtaT22AY.46.50.000397
ORF1ab/nsp31742Y1742YtaCtaT22AY.5.30.000675
ORF1ab/nsp31742Y1742YtaCtaT22AY.510.001818
ORF1ab/nsp31742Y1742YtaCtaT22AY.680.000547
ORF1ab/nsp31742Y1742YtaCtaT22AY.740.000231
ORF1ab/nsp31742Y1742YtaCtaT22AY.840.000875
ORF1ab/nsp31742Y1742YtaCtaT22AY.99.20.000184
ORF1ab/nsp31742Y1742YtaCtaT22B.1.1.10.000653
ORF1ab/nsp31742Y1742YtaCtaT22B.1.1.1860.006873
ORF1ab/nsp31742Y1742YtaCtaT22B.1.1.2040.006079
ORF1ab/nsp31742Y1742YtaCtaT22B.1.1.2630.003115
ORF1ab/nsp31742Y1742YtaCtaT22B.1.1.2690.002706
ORF1ab/nsp31742Y1742YtaCtaT22B.1.1.2790.002242
ORF1ab/nsp31742Y1742YtaCtaT22B.1.1.3060.000877
ORF1ab/nsp31742Y1742YtaCtaT22B.1.1.3120.003824
ORF1ab/nsp31742Y1742YtaCtaT22B.1.1.3360.033333
ORF1ab/nsp31742Y1742YtaCtaT22B.1.1.520.02439
ORF1ab/nsp31742Y1742YtaCtaT22B.1.177.50.002484
ORF1ab/nsp31742Y1742YtaCtaT22B.1.2400.000431
ORF1ab/nsp31742Y1742YtaCtaT22B.1.258.170.000208
ORF1ab/nsp31742Y1742YtaCtaT22B.1.36.160.002849
ORF1ab/nsp31742Y1742YtaCtaT22B.1.36.190.018519
ORF1ab/nsp31742Y1742YtaCtaT22B.1.3960.001411
ORF1ab/nsp31742Y1742YtaCtaT22B.1.4590.008163
ORF1ab/nsp31742Y1742YtaCtaT22B.1.5640.000852
ORF1ab/nsp31742Y1742YtaCtaT22B.1.5770.001375
ORF1ab/nsp31742Y1742YtaCtaT22B.1.6190.001742
ORF1ab/nsp31742Y1742YtaCtaT22B.1.6200.001892
ORF1ab/nsp31742Y1742YtaCtaT22B.1.6270.00404
ORF1ab/nsp31742Y1742YtaCtaT22B.310.007463
ORF1ab/nsp31742Y1742YtaCtaT22N.30.011628
ORF1ab/nsp31742Y1742YtaCtaT22P.1.70.000639
ORF1ab/nsp31742Y1742YtaCtaT22P.1.80.009569
ORF1ab/nsp31742Y1742YtaCtaT11A.10.000282
ORF1ab/nsp31742Y1742YtaCtaT11AW.10.003049
ORF1ab/nsp31742Y1742YtaCtaT11AY.10.000396
ORF1ab/nsp31742Y1742YtaCtaT11AY.1070.000466
ORF1ab/nsp31742Y1742YtaCtaT11AY.120.10.000321
ORF1ab/nsp31742Y1742YtaCtaT11AY.130.000161
ORF1ab/nsp31742Y1742YtaCtaT11AY.16.10.00047
ORF1ab/nsp31742Y1742YtaCtaT11AY.190.00114
ORF1ab/nsp31742Y1742YtaCtaT11AY.280.00189
ORF1ab/nsp31742Y1742YtaCtaT11AY.300.000396
ORF1ab/nsp31742Y1742YtaCtaT11AY.320.000532
ORF1ab/nsp31742Y1742YtaCtaT11AY.34.10.00051
ORF1ab/nsp31742Y1742YtaCtaT11AY.350.000233
ORF1ab/nsp31742Y1742YtaCtaT11AY.410.000294
ORF1ab/nsp31742Y1742YtaCtaT11AY.46.20.000635
ORF1ab/nsp31742Y1742YtaCtaT11AY.5.40.000277
ORF1ab/nsp31742Y1742YtaCtaT11AY.520.000814
ORF1ab/nsp31742Y1742YtaCtaT11AY.530.000288
ORF1ab/nsp31742Y1742YtaCtaT11AY.550.000917
ORF1ab/nsp31742Y1742YtaCtaT11AY.570.000656
ORF1ab/nsp31742Y1742YtaCtaT11AY.690.000187
ORF1ab/nsp31742Y1742YtaCtaT11AY.770.001127
ORF1ab/nsp31742Y1742YtaCtaT11AY.800.001129
ORF1ab/nsp31742Y1742YtaCtaT11AY.820.001357
ORF1ab/nsp31742Y1742YtaCtaT11AY.90.000068
ORF1ab/nsp31742Y1742YtaCtaT11AY.940.000443
ORF1ab/nsp31742Y1742YtaCtaT11AY.950.000761
ORF1ab/nsp31742Y1742YtaCtaT11AY.970.001701
ORF1ab/nsp31742Y1742YtaCtaT11AZ.30.00152
ORF1ab/nsp31742Y1742YtaCtaT11B.1.1.100.001115
ORF1ab/nsp31742Y1742YtaCtaT11B.1.1.1350.004695
ORF1ab/nsp31742Y1742YtaCtaT11B.1.1.1890.001513
ORF1ab/nsp31742Y1742YtaCtaT11B.1.1.2080.012195
ORF1ab/nsp31742Y1742YtaCtaT11B.1.1.2280.003049
ORF1ab/nsp31742Y1742YtaCtaT11B.1.1.2370.005405
ORF1ab/nsp31742Y1742YtaCtaT11B.1.1.2770.000759
ORF1ab/nsp31742Y1742YtaCtaT11B.1.1.2800.003086
ORF1ab/nsp31742Y1742YtaCtaT11B.1.1.2970.002237
ORF1ab/nsp31742Y1742YtaCtaT11B.1.1.310.066667
ORF1ab/nsp31742Y1742YtaCtaT11B.1.1.3160.000925
ORF1ab/nsp31742Y1742YtaCtaT11B.1.1.330.000421
ORF1ab/nsp31742Y1742YtaCtaT11B.1.1.3330.001076
ORF1ab/nsp31742Y1742YtaCtaT11B.1.1.3480.000796
ORF1ab/nsp31742Y1742YtaCtaT11B.1.1.3540.004386
ORF1ab/nsp31742Y1742YtaCtaT11B.1.1.3600.03125
ORF1ab/nsp31742Y1742YtaCtaT11B.1.1.3690.000446
ORF1ab/nsp31742Y1742YtaCtaT11B.1.1.370.000193
ORF1ab/nsp31742Y1742YtaCtaT11B.1.1.390.00051
ORF1ab/nsp31742Y1742YtaCtaT11B.1.1.3910.008547
ORF1ab/nsp31742Y1742YtaCtaT11B.1.1.3970.002252
ORF1ab/nsp31742Y1742YtaCtaT11B.1.1.3980.003226
ORF1ab/nsp31742Y1742YtaCtaT11B.1.1.4040.015873
ORF1ab/nsp31742Y1742YtaCtaT11B.1.1.4130.006897
ORF1ab/nsp31742Y1742YtaCtaT11B.1.1.4250.045455
ORF1ab/nsp31742Y1742YtaCtaT11B.1.1.4310.016129
ORF1ab/nsp31742Y1742YtaCtaT11B.1.1.4330.001425
ORF1ab/nsp31742Y1742YtaCtaT11B.1.1.440.00241
ORF1ab/nsp31742Y1742YtaCtaT11B.1.1.4530.008475
ORF1ab/nsp31742Y1742YtaCtaT11B.1.1.630.000386
ORF1ab/nsp31742Y1742YtaCtaT11B.1.1240.007812
ORF1ab/nsp31742Y1742YtaCtaT11B.1.1310.008772
ORF1ab/nsp31742Y1742YtaCtaT11B.1.160.300.002976
ORF1ab/nsp31742Y1742YtaCtaT11B.1.177.120.000152
ORF1ab/nsp31742Y1742YtaCtaT11B.1.177.180.00116
ORF1ab/nsp31742Y1742YtaCtaT11B.1.177.440.000519
ORF1ab/nsp31742Y1742YtaCtaT11B.1.177.570.000281
ORF1ab/nsp31742Y1742YtaCtaT11B.1.177.60.000977
ORF1ab/nsp31742Y1742YtaCtaT11B.1.177.70.000165
ORF1ab/nsp31742Y1742YtaCtaT11B.1.1950.005025
ORF1ab/nsp31742Y1742YtaCtaT11B.1.2060.000816
ORF1ab/nsp31742Y1742YtaCtaT11B.1.2100.002132
ORF1ab/nsp31742Y1742YtaCtaT11B.1.214.10.02
ORF1ab/nsp31742Y1742YtaCtaT11B.1.214.20.0006
ORF1ab/nsp31742Y1742YtaCtaT11B.1.230.006061
ORF1ab/nsp31742Y1742YtaCtaT11B.1.2320.000537
ORF1ab/nsp31742Y1742YtaCtaT11B.1.2360.002053
ORF1ab/nsp31742Y1742YtaCtaT11B.1.2390.001221
ORF1ab/nsp31742Y1742YtaCtaT11B.1.258.140.00098
ORF1ab/nsp31742Y1742YtaCtaT11B.1.3240.001605
ORF1ab/nsp31742Y1742YtaCtaT11B.1.3290.000608
ORF1ab/nsp31742Y1742YtaCtaT11B.1.3320.003497
ORF1ab/nsp31742Y1742YtaCtaT11B.1.36.10.00114
ORF1ab/nsp31742Y1742YtaCtaT11B.1.36.170.000494
ORF1ab/nsp31742Y1742YtaCtaT11B.1.36.220.001208
ORF1ab/nsp31742Y1742YtaCtaT11B.1.36.70.004
ORF1ab/nsp31742Y1742YtaCtaT11B.1.3670.000792
ORF1ab/nsp31742Y1742YtaCtaT11B.1.3690.000285
ORF1ab/nsp31742Y1742YtaCtaT11B.1.3980.002976
ORF1ab/nsp31742Y1742YtaCtaT11B.1.4010.008197
ORF1ab/nsp31742Y1742YtaCtaT11B.1.4090.000781
ORF1ab/nsp31742Y1742YtaCtaT11B.1.4280.00102
ORF1ab/nsp31742Y1742YtaCtaT11B.1.4360.001029
ORF1ab/nsp31742Y1742YtaCtaT11B.1.4560.003268
ORF1ab/nsp31742Y1742YtaCtaT11B.1.4690.00361
ORF1ab/nsp31742Y1742YtaCtaT11B.1.4930.025641
ORF1ab/nsp31742Y1742YtaCtaT11B.1.5030.002488
ORF1ab/nsp31742Y1742YtaCtaT11B.1.5070.011236
ORF1ab/nsp31742Y1742YtaCtaT11B.1.5100.026316
ORF1ab/nsp31742Y1742YtaCtaT11B.1.5600.00463
ORF1ab/nsp31742Y1742YtaCtaT11B.1.5610.000397
ORF1ab/nsp31742Y1742YtaCtaT11B.1.5650.00081
ORF1ab/nsp31742Y1742YtaCtaT11B.1.5670.003333
ORF1ab/nsp31742Y1742YtaCtaT11B.1.5800.004065
ORF1ab/nsp31742Y1742YtaCtaT11B.1.6230.000536
ORF1ab/nsp31742Y1742YtaCtaT11B.1.6340.003425
ORF1ab/nsp31742Y1742YtaCtaT11B.1.6390.021739
ORF1ab/nsp31742Y1742YtaCtaT11C.140.004329
ORF1ab/nsp31742Y1742YtaCtaT11C.310.017857
ORF1ab/nsp31742Y1742YtaCtaT11N.50.001767
ORF1ab/nsp31742Y1742YtaCtaT11P.1.20.001156
ORF1ab/nsp31742Y1742YtaCtaT11P.1.90.004808
ORF1ab/nsp31742Y1742YtaCtaT11P.30.001595
ORF1ab/nsp31742Y1742YtaCtaT11Q.20.000613
ORF1ab/nsp31742Y1742YtaCtaT11S.10.00495
ORF1ab/nsp31742Y1742YtaCtaT11W.30.005263

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.