CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = Y1452X

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31452Y1452XY2270XnonsyntaTtaG870.8757073-7075
ORF1ab/nsp31452Y1452XY2270XnonsyntaTtaA810.1257073-7075

Details of the mutation Y1452X within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31452Y1452XtaTtaG78All0.000001
ORF1ab/nsp31452Y1452XtaTtaA18All0
ORF1ab/nsp31452Y1452XtaTtaG22AY.40.000003
ORF1ab/nsp31452Y1452XtaTtaG11AY.1020.000027
ORF1ab/nsp31452Y1452XtaTtaG11AY.1030.000006
ORF1ab/nsp31452Y1452XtaTtaA11AY.430.000004
ORF1ab/nsp31452Y1452XtaTtaG11B.1.1.3000.010753
ORF1ab/nsp31452Y1452XtaTtaG11B.1.1.70.000001
ORF1ab/nsp31452Y1452XtaTtaG11B.1.20.000009