CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = Y1452C

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31452Y1452CY2270CnonsyntAttGt22210.9545457073-7075
ORF1ab/nsp31452Y1452CY2270CnonsyntATtGC2210.04545457073-7075

Details of the mutation Y1452C within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31452Y1452CtAttGt2122All0.000004
ORF1ab/nsp31452Y1452CtATtGC122All0
ORF1ab/nsp31452Y1452CtAttGt1111AY.740.001272
ORF1ab/nsp31452Y1452CtAttGt33B.10.000027
ORF1ab/nsp31452Y1452CtAttGt22B.1.20.000018
ORF1ab/nsp31452Y1452CtAttGt11AY.4.20.000022
ORF1ab/nsp31452Y1452CtATtGC11B.1.1.70.000001
ORF1ab/nsp31452Y1452CtAttGt11B.1.4270.00005
ORF1ab/nsp31452Y1452CtAttGt11B.1.5250.000113
ORF1ab/nsp31452Y1452CtAttGt11B.1.5700.002941
ORF1ab/nsp31452Y1452CtAttGt11B.1.6330.041667