CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = Y1444del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31444Y1444del1Y2262del1delTac-ac630.57049-7051
ORF1ab/nsp31444Y1444del1Y2262del1deltAct-c620.3333337049-7051
ORF1ab/nsp31444Y1444del1Y2262del1deltaCta-610.1666677049-7051

Details of the mutation Y1444del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31444Y1444del1Tac-ac36All0.000001
ORF1ab/nsp31444Y1444del1tAct-c26All0
ORF1ab/nsp31444Y1444del1taCta-16All0
ORF1ab/nsp31444Y1444del1Tac-ac11AY.360.000148
ORF1ab/nsp31444Y1444del1taCta-11AY.40.000002
ORF1ab/nsp31444Y1444del1tAct-c11AY.460.000104
ORF1ab/nsp31444Y1444del1Tac-ac11B.1.1.70.000001
ORF1ab/nsp31444Y1444del1Tac-ac11B.1.177.70.000165
ORF1ab/nsp31444Y1444del1tAct-c11B.1.20.000009