CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = Y1444C

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31444Y1444CY2262CnonsyntActGc2342300.9829067049-7051
ORF1ab/nsp31444Y1444CY2262CnonsyntACtGT23440.0170947049-7051

Details of the mutation Y1444C within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31444Y1444CtActGc230234All0.000044
ORF1ab/nsp31444Y1444CtACtGT4234All0.000001
ORF1ab/nsp31444Y1444CtActGc163163P.10.002568
ORF1ab/nsp31444Y1444CtActGc99AY.30.00009
ORF1ab/nsp31444Y1444CtActGc88AY.40.000012
ORF1ab/nsp31444Y1444CtActGc55B.1.1.70.000004
ORF1ab/nsp31444Y1444CtACtGT340.166667
ORF1ab/nsp31444Y1444CtActGc140.055556
ORF1ab/nsp31444Y1444CtActGc44P.1.120.001936
ORF1ab/nsp31444Y1444CtActGc33AY.200.000117
ORF1ab/nsp31444Y1444CtActGc33AY.250.000018
ORF1ab/nsp31444Y1444CtActGc33AY.590.001589
ORF1ab/nsp31444Y1444CtActGc33AY.740.000347
ORF1ab/nsp31444Y1444CtActGc33B.1.1600.000094
ORF1ab/nsp31444Y1444CtActGc33B.1.20.000026
ORF1ab/nsp31444Y1444CtActGc33B.1.617.20.000011
ORF1ab/nsp31444Y1444CtActGc22AY.1030.000012
ORF1ab/nsp31444Y1444CtActGc22AY.420.00008
ORF1ab/nsp31444Y1444CtActGc11AY.1020.000027
ORF1ab/nsp31444Y1444CtActGc11AY.370.000316
ORF1ab/nsp31444Y1444CtActGc11AY.460.000104
ORF1ab/nsp31444Y1444CtActGc11AY.610.000105
ORF1ab/nsp31444Y1444CtActGc11AY.670.000464
ORF1ab/nsp31444Y1444CtActGc11AY.840.000437
ORF1ab/nsp31444Y1444CtActGc11AY.870.000833
ORF1ab/nsp31444Y1444CtActGc11AY.99.20.000092
ORF1ab/nsp31444Y1444CtActGc11B.10.000009
ORF1ab/nsp31444Y1444CtActGc11B.1.10.000018
ORF1ab/nsp31444Y1444CtActGc11B.1.1.280.000311
ORF1ab/nsp31444Y1444CtActGc11B.1.1.3060.000438
ORF1ab/nsp31444Y1444CtActGc11B.1.1.700.000341
ORF1ab/nsp31444Y1444CtActGc11B.1.177.50.001242
ORF1ab/nsp31444Y1444CtActGc11B.1.3330.010526
ORF1ab/nsp31444Y1444CtACtGT11C.350.000774