CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = Y1323del2

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31323Y1323del2Y2141del2deltATt--320.6666676686-6688
ORF1ab/nsp31323Y1323del2Y2141del2delTAt--t310.3333336686-6688

Details of the mutation Y1323del2 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31323Y1323del2tATt--23All0
ORF1ab/nsp31323Y1323del2TAt--t13All0
ORF1ab/nsp31323Y1323del2TAt--t11AY.1030.000006
ORF1ab/nsp31323Y1323del2tATt--11B.1.1.370.000193
ORF1ab/nsp31323Y1323del2tATt--11B.1.1.70.000001