CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = V50L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp350V50LV868LnonsynGtaTta238623800.9974852867-2869
ORF1ab/nsp350V50LV868LnonsynGtaCta238640.001676452867-2869
ORF1ab/nsp350V50LV868LnonsynGtACtG238610.0004191112867-2869
ORF1ab/nsp350V50LV868LnonsynGtATtG238610.0004191112867-2869

Details of the mutation V50L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp350V50LGtaTta23802386All0.000455
ORF1ab/nsp350V50LGtaCta42386All0.000001
ORF1ab/nsp350V50LGtATtG12386All0
ORF1ab/nsp350V50LGtACtG12386All0
ORF1ab/nsp350V50LGtaTta12141214B.1.5260.028534
ORF1ab/nsp350V50LGtaTta370370B.1.20.003258
ORF1ab/nsp350V50LGtaTta9494AY.340.009115
ORF1ab/nsp350V50LGtaTta9090B.1.5750.027306
ORF1ab/nsp350V50LGtaTta8181AY.40.000126
ORF1ab/nsp350V50LGtaTta6163B.1.1.5190.002422
ORF1ab/nsp350V50LGtaCta163B.1.1.5190.00004
ORF1ab/nsp350V50LGtACtG163B.1.1.5190.00004
ORF1ab/nsp350V50LGtaTta4849B.1.1.70.000043
ORF1ab/nsp350V50LGtaCta149B.1.1.70.000001
ORF1ab/nsp350V50LGtaTta4141B.10.000376
ORF1ab/nsp350V50LGtaTta3838B.1.617.20.000143
ORF1ab/nsp350V50LGtaTta3737B.1.3510.0011
ORF1ab/nsp350V50LGtaTta2828AY.1030.000174
ORF1ab/nsp350V50LGtaTta2223AY.430.000097
ORF1ab/nsp350V50LGtaCta123AY.430.000004
ORF1ab/nsp350V50LGtaTta1414P.10.000221
ORF1ab/nsp350V50LGtaTta1212AY.300.004749
ORF1ab/nsp350V50LGtaTta1010B.1.4290.000235
ORF1ab/nsp350V50LGtaTta99AY.5.30.003036
ORF1ab/nsp350V50LGtaTta99B.1.10.000163
ORF1ab/nsp350V50LGtaTta88AY.39.10.000317
ORF1ab/nsp350V50LGtaTta88AZ.10.006938
ORF1ab/nsp350V50LGtaTta88C.380.064516
ORF1ab/nsp350V50LGtaTta77B.1.1600.000218
ORF1ab/nsp350V50LGtaTta67B.1.1770.000079
ORF1ab/nsp350V50LGtaCta17B.1.1770.000013
ORF1ab/nsp350V50LGtaTta66AY.200.000233
ORF1ab/nsp350V50LGtaTta66AY.250.000036
ORF1ab/nsp350V50LGtaTta66AY.670.002786
ORF1ab/nsp350V50LGtaTta66AY.830.010345
ORF1ab/nsp350V50LGtaTta66B.1.160.330.026549
ORF1ab/nsp350V50LGtaTta66B.1.4270.000303
ORF1ab/nsp350V50LGtaTta55AY.330.000334
ORF1ab/nsp350V50LGtaTta55B.1.177.730.002831
ORF1ab/nsp350V50LGtaTta55B.1.5580.022831
ORF1ab/nsp350V50LGtaTta55B.1.5960.000436
ORF1ab/nsp350V50LGtaTta55B.60.00455
ORF1ab/nsp350V50LGtaTta44AY.50.000083
ORF1ab/nsp350V50LGtaTta44B.1.1.3180.001207
ORF1ab/nsp350V50LGtaTta33AY.1000.000138
ORF1ab/nsp350V50LGtaTta33AY.1020.00008
ORF1ab/nsp350V50LGtaTta33AY.440.000018
ORF1ab/nsp350V50LGtaTta33AY.540.000286
ORF1ab/nsp350V50LGtaTta33AY.9.20.00011
ORF1ab/nsp350V50LGtaTta33B.1.1790.011278
ORF1ab/nsp350V50LGtaTta22A.23.10.001408
ORF1ab/nsp350V50LGtaTta22AY.130.000322
ORF1ab/nsp350V50LGtaTta22AY.260.000057
ORF1ab/nsp350V50LGtaTta22AY.270.000129
ORF1ab/nsp350V50LGtaTta22AY.290.000032
ORF1ab/nsp350V50LGtaTta22AY.30.00002
ORF1ab/nsp350V50LGtaTta22AY.460.000208
ORF1ab/nsp350V50LGtaTta22AY.60.000082
ORF1ab/nsp350V50LGtaTta22AY.610.00021
ORF1ab/nsp350V50LGtaTta22AY.75.10.000361
ORF1ab/nsp350V50LGtaTta22B.1.1.280.000622
ORF1ab/nsp350V50LGtaTta22B.1.1.2830.046512
ORF1ab/nsp350V50LGtaTta22B.1.1.4310.032258
ORF1ab/nsp350V50LGtaTta22B.1.2320.001075
ORF1ab/nsp350V50LGtaTta22B.1.2340.000264
ORF1ab/nsp350V50LGtaTta22B.1.4590.008163
ORF1ab/nsp350V50LGtaTta22B.1.6370.000146
ORF1ab/nsp350V50LGtaTta22D.20.00015
ORF1ab/nsp350V50LGtaTta11AP.10.001502
ORF1ab/nsp350V50LGtaTta11AY.1050.000643
ORF1ab/nsp350V50LGtaTta11AY.1160.000287
ORF1ab/nsp350V50LGtaTta11AY.1180.000063
ORF1ab/nsp350V50LGtaTta11AY.1210.000135
ORF1ab/nsp350V50LGtaTta11AY.160.00038
ORF1ab/nsp350V50LGtaTta11AY.320.000532
ORF1ab/nsp350V50LGtaTta11AY.390.000025
ORF1ab/nsp350V50LGtaTta11AY.4.20.000022
ORF1ab/nsp350V50LGtaTta11AY.4.50.000107
ORF1ab/nsp350V50LGtaTta11AY.46.40.000165
ORF1ab/nsp350V50LGtaTta11AY.46.60.000072
ORF1ab/nsp350V50LGtaTta11AY.470.000031
ORF1ab/nsp350V50LGtaTta11AY.550.000917
ORF1ab/nsp350V50LGtaTta11AY.730.000665
ORF1ab/nsp350V50LGtaTta11AY.750.000056
ORF1ab/nsp350V50LGtaTta11AY.80.000606
ORF1ab/nsp350V50LGtaTta11AY.840.000437
ORF1ab/nsp350V50LGtaTta11AY.90.000068
ORF1ab/nsp350V50LGtaTta11AY.98.10.000048
ORF1ab/nsp350V50LGtaTta11B.1.1.1530.001095
ORF1ab/nsp350V50LGtaTta11B.1.1.1690.018182
ORF1ab/nsp350V50LGtaTta11B.1.1.2070.001182
ORF1ab/nsp350V50LGtATtG11B.1.1.2770.000759
ORF1ab/nsp350V50LGtaTta11B.1.1.3220.008772
ORF1ab/nsp350V50LGtaTta11B.1.1.3260.001761
ORF1ab/nsp350V50LGtaTta11B.1.1.3480.000796
ORF1ab/nsp350V50LGtaTta11B.1.1.3750.011905
ORF1ab/nsp350V50LGtaTta11B.1.1.4160.000905
ORF1ab/nsp350V50LGtaTta11B.1.1.4480.002033
ORF1ab/nsp350V50LGtaTta11B.1.1400.018868
ORF1ab/nsp350V50LGtaTta11B.1.220.001318
ORF1ab/nsp350V50LGtaTta11B.1.36.80.001
ORF1ab/nsp350V50LGtaTta11B.1.36.90.003215
ORF1ab/nsp350V50LGtaTta11B.1.4220.000812
ORF1ab/nsp350V50LGtaTta11B.1.466.20.000391
ORF1ab/nsp350V50LGtaTta11B.1.6230.000536
ORF1ab/nsp350V50LGtaTta11B.30.000831
ORF1ab/nsp350V50LGtaTta11C.36.20.034483
ORF1ab/nsp350V50LGtaTta11N.60.007092
ORF1ab/nsp350V50LGtaTta11P.1.10.000318
ORF1ab/nsp350V50LGtaTta11P.1.120.000484
ORF1ab/nsp350V50LGtaTta11Q.10.000126