CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = V44V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp344V44VV862VsyngtTgtC5895210.884552849-2851
ORF1ab/nsp344V44VV862VsyngtTgtA589420.07130732849-2851
ORF1ab/nsp344V44VV862VsyngtTgtG589260.04414262849-2851

Details of the mutation V44V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp344V44VgtTgtC521589All0.0001
ORF1ab/nsp344V44VgtTgtA42589All0.000008
ORF1ab/nsp344V44VgtTgtG26589All0.000005
ORF1ab/nsp344V44VgtTgtC179179AY.4.20.003882
ORF1ab/nsp344V44VgtTgtC8998B.1.1.70.00008
ORF1ab/nsp344V44VgtTgtA698B.1.1.70.000005
ORF1ab/nsp344V44VgtTgtG398B.1.1.70.000003
ORF1ab/nsp344V44VgtTgtC5281AY.40.000081
ORF1ab/nsp344V44VgtTgtG1781AY.40.000026
ORF1ab/nsp344V44VgtTgtA1281AY.40.000019
ORF1ab/nsp344V44VgtTgtC4747B.1.6210.00416
ORF1ab/nsp344V44VgtTgtC2323AY.1030.000143
ORF1ab/nsp344V44VgtTgtC2020AY.250.00012
ORF1ab/nsp344V44VgtTgtC1419B.1.617.20.000053
ORF1ab/nsp344V44VgtTgtA319B.1.617.20.000011
ORF1ab/nsp344V44VgtTgtG219B.1.617.20.000008
ORF1ab/nsp344V44VgtTgtC1616B.10.000147
ORF1ab/nsp344V44VgtTgtC1414AY.1140.003235
ORF1ab/nsp344V44VgtTgtA1010B.1.5960.000871
ORF1ab/nsp344V44VgtTgtC77AY.1160.002007
ORF1ab/nsp344V44VgtTgtC55A0.001935
ORF1ab/nsp344V44VgtTgtC55AY.370.00158
ORF1ab/nsp344V44VgtTgtC55AY.470.000156
ORF1ab/nsp344V44VgtTgtC44AY.140.000352
ORF1ab/nsp344V44VgtTgtC44AY.30.00004
ORF1ab/nsp344V44VgtTgtC44B0.000511
ORF1ab/nsp344V44VgtTgtC44B.1.1.4480.00813
ORF1ab/nsp344V44VgtTgtC34B.1.20.000026
ORF1ab/nsp344V44VgtTgtA14B.1.20.000009
ORF1ab/nsp344V44VgtTgtC220.111111
ORF1ab/nsp344V44VgtTgtC22AY.1200.000074
ORF1ab/nsp344V44VgtTgtC12AY.200.000039
ORF1ab/nsp344V44VgtTgtA12AY.200.000039
ORF1ab/nsp344V44VgtTgtC22B.1.4160.002538
ORF1ab/nsp344V44VgtTgtG12B.1.4290.000024
ORF1ab/nsp344V44VgtTgtC12B.1.4290.000024
ORF1ab/nsp344V44VgtTgtA12P.10.000016
ORF1ab/nsp344V44VgtTgtC12P.10.000016
ORF1ab/nsp344V44VgtTgtC11A.20.000662
ORF1ab/nsp344V44VgtTgtC11A.2.40.003367
ORF1ab/nsp344V44VgtTgtC11A.50.001923
ORF1ab/nsp344V44VgtTgtG11AY.116.10.000311
ORF1ab/nsp344V44VgtTgtC11AY.16.10.00047
ORF1ab/nsp344V44VgtTgtC11AY.290.000016
ORF1ab/nsp344V44VgtTgtC11AY.390.000025
ORF1ab/nsp344V44VgtTgtA11AY.430.000004
ORF1ab/nsp344V44VgtTgtA11AY.450.000122
ORF1ab/nsp344V44VgtTgtC11AY.460.000104
ORF1ab/nsp344V44VgtTgtA11AY.750.000056
ORF1ab/nsp344V44VgtTgtG11AY.860.00083
ORF1ab/nsp344V44VgtTgtC11B.1.1.1710.003676
ORF1ab/nsp344V44VgtTgtC11B.1.1.2220.000204
ORF1ab/nsp344V44VgtTgtA11B.1.1.3160.000925
ORF1ab/nsp344V44VgtTgtA11B.1.1.4290.004608
ORF1ab/nsp344V44VgtTgtA11B.1.1.500.000679
ORF1ab/nsp344V44VgtTgtC11B.1.1.5250.005464
ORF1ab/nsp344V44VgtTgtC11B.1.1270.002198
ORF1ab/nsp344V44VgtTgtA11B.1.1600.000031
ORF1ab/nsp344V44VgtTgtC11B.1.1770.000013
ORF1ab/nsp344V44VgtTgtA11B.1.177.480.003125
ORF1ab/nsp344V44VgtTgtG11B.1.177.870.000728
ORF1ab/nsp344V44VgtTgtC11B.1.36.100.004785
ORF1ab/nsp344V44VgtTgtC11B.1.4700.001404
ORF1ab/nsp344V44VgtTgtC11B.1.617.10.000129
ORF1ab/nsp344V44VgtTgtC11P.1.100.000269
ORF1ab/nsp344V44VgtTgtC11Q.40.000455