CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = V44L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp344V44LV862LnonsynGttCtt33280.8484852849-2851
ORF1ab/nsp344V44LV862LnonsynGtTCtG3320.06060612849-2851
ORF1ab/nsp344V44LV862LnonsynGtTCtC3320.06060612849-2851
ORF1ab/nsp344V44LV862LnonsynGtTTtG3310.0303032849-2851

Details of the mutation V44L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp344V44LGttCtt2833All0.000005
ORF1ab/nsp344V44LGtTCtC233All0
ORF1ab/nsp344V44LGtTCtG233All0
ORF1ab/nsp344V44LGtTTtG133All0
ORF1ab/nsp344V44LGttCtt1414B.1.1650.166667
ORF1ab/nsp344V44LGttCtt99B.1.1.2140.000499
ORF1ab/nsp344V44LGttCtt240.111111
ORF1ab/nsp344V44LGtTCtC240.111111
ORF1ab/nsp344V44LGttCtt12B.1.4290.000024
ORF1ab/nsp344V44LGtTCtG12B.1.4290.000024
ORF1ab/nsp344V44LGtTCtG11AY.430.000004
ORF1ab/nsp344V44LGttCtt11B.10.000009
ORF1ab/nsp344V44LGttCtt11B.1.10.000018
ORF1ab/nsp344V44LGtTTtG11B.1.617.20.000004