CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = V300A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3300V300AV1118AnonsyngTcgCc2692670.9925653617-3619
ORF1ab/nsp3300V300AV1118AnonsyngTCgCA26910.003717473617-3619
ORF1ab/nsp3300V300AV1118AnonsyngTCgCT26910.003717473617-3619

Details of the mutation V300A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3300V300AgTcgCc267269All0.000051
ORF1ab/nsp3300V300AgTCgCT1269All0
ORF1ab/nsp3300V300AgTCgCA1269All0
ORF1ab/nsp3300V300AgTcgCc6363AY.40.000098
ORF1ab/nsp3300V300AgTcgCc5656AY.200.002176
ORF1ab/nsp3300V300AgTcgCc1616AY.1030.000099
ORF1ab/nsp3300V300AgTcgCc1515B.1.1.70.000013
ORF1ab/nsp3300V300AgTcgCc1113B.1.617.20.000041
ORF1ab/nsp3300V300AgTCgCT113B.1.617.20.000004
ORF1ab/nsp3300V300AgTCgCA113B.1.617.20.000004
ORF1ab/nsp3300V300AgTcgCc99B.1.1600.000281
ORF1ab/nsp3300V300AgTcgCc88AY.140.000704
ORF1ab/nsp3300V300AgTcgCc77AY.430.000031
ORF1ab/nsp3300V300AgTcgCc77AY.700.00146
ORF1ab/nsp3300V300AgTcgCc66B.1.177.810.001136
ORF1ab/nsp3300V300AgTcgCc66B.1.5620.111111
ORF1ab/nsp3300V300AgTcgCc55AY.250.00003
ORF1ab/nsp3300V300AgTcgCc55AY.390.000124
ORF1ab/nsp3300V300AgTcgCc55B.10.000046
ORF1ab/nsp3300V300AgTcgCc55B.1.10.000091
ORF1ab/nsp3300V300AgTcgCc44AY.440.000024
ORF1ab/nsp3300V300AgTcgCc44B.1.3510.000119
ORF1ab/nsp3300V300AgTcgCc44B.1.4970.001259
ORF1ab/nsp3300V300AgTcgCc44P.10.000063
ORF1ab/nsp3300V300AgTcgCc22AY.30.00002
ORF1ab/nsp3300V300AgTcgCc22AY.330.000134
ORF1ab/nsp3300V300AgTcgCc22AY.610.00021
ORF1ab/nsp3300V300AgTcgCc22B.1.20.000018
ORF1ab/nsp3300V300AgTcgCc11AY.1140.000231
ORF1ab/nsp3300V300AgTcgCc11AY.4.40.000409
ORF1ab/nsp3300V300AgTcgCc11AY.50.000021
ORF1ab/nsp3300V300AgTcgCc11AY.5.10.003759
ORF1ab/nsp3300V300AgTcgCc11AY.9.20.000037
ORF1ab/nsp3300V300AgTcgCc11AY.940.000443
ORF1ab/nsp3300V300AgTcgCc11AY.990.001049
ORF1ab/nsp3300V300AgTcgCc11B.1.1.10.000327
ORF1ab/nsp3300V300AgTcgCc11B.1.1.2070.001182
ORF1ab/nsp3300V300AgTcgCc11B.1.1.2260.005814
ORF1ab/nsp3300V300AgTcgCc11B.1.1.280.000311
ORF1ab/nsp3300V300AgTcgCc11B.1.1.3060.000438
ORF1ab/nsp3300V300AgTcgCc11B.1.1.3180.000302
ORF1ab/nsp3300V300AgTcgCc11B.1.1.390.00051
ORF1ab/nsp3300V300AgTcgCc11B.1.1.5190.00004
ORF1ab/nsp3300V300AgTcgCc11B.1.2580.000067
ORF1ab/nsp3300V300AgTcgCc11B.1.36.90.003215
ORF1ab/nsp3300V300AgTcgCc11B.1.6370.000073
ORF1ab/nsp3300V300AgTcgCc11P.1.150.000232