CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp3 | 1806 | V1806V | V2624V | syn | gtG | gtT | 1887 | 1594 | 0.844727 | 8135-8137 |
ORF1ab/nsp3 | 1806 | V1806V | V2624V | syn | gtG | gtA | 1887 | 261 | 0.138315 | 8135-8137 |
ORF1ab/nsp3 | 1806 | V1806V | V2624V | syn | gtG | gtC | 1887 | 32 | 0.0169581 | 8135-8137 |
Details of the mutation V1806V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1594 | 1887 | All | 0.000305 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtA | 261 | 1887 | All | 0.00005 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtC | 32 | 1887 | All | 0.000006 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 211 | 281 | B.1.1.7 | 0.000189 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtA | 66 | 281 | B.1.1.7 | 0.000059 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtC | 4 | 281 | B.1.1.7 | 0.000004 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 185 | 216 | AY.4 | 0.000288 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtA | 29 | 216 | AY.4 | 0.000045 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtC | 2 | 216 | AY.4 | 0.000003 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 135 | 135 | N.6 | 0.957447 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 77 | 125 | AY.103 | 0.000478 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtA | 48 | 125 | AY.103 | 0.000298 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 84 | 104 | B.1.617.2 | 0.000316 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtA | 19 | 104 | B.1.617.2 | 0.000072 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtC | 1 | 104 | B.1.617.2 | 0.000004 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 55 | 68 | AY.43 | 0.000244 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtC | 7 | 68 | AY.43 | 0.000031 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtA | 6 | 68 | AY.43 | 0.000027 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 61 | 63 | AY.44 | 0.000371 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtA | 2 | 63 | AY.44 | 0.000012 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 51 | 52 | B.1.1 | 0.000925 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtA | 1 | 52 | B.1.1 | 0.000018 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 41 | 50 | B.1.429 | 0.000965 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtA | 9 | 50 | B.1.429 | 0.000212 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 41 | 42 | AY.5 | 0.000847 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtA | 1 | 42 | AY.5 | 0.000021 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 31 | 31 | B.1.177.16 | 0.020598 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 22 | 29 | AY.117 | 0.001859 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtC | 7 | 29 | AY.117 | 0.000592 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 29 | 29 | P.1.15 | 0.006738 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 26 | 28 | B.1 | 0.000238 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtA | 1 | 28 | B.1 | 0.000009 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtC | 1 | 28 | B.1 | 0.000009 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 26 | 26 | AY.102 | 0.000689 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 20 | 26 | AY.25 | 0.00012 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtA | 6 | 26 | AY.25 | 0.000036 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 15 | 25 | P.1 | 0.000236 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtA | 10 | 25 | P.1 | 0.000158 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 24 | 24 | A.21 | 0.066482 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 22 | 22 | B.1.1.50 | 0.014936 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 20 | 22 | B.1.2 | 0.000176 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtA | 2 | 22 | B.1.2 | 0.000018 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtA | 14 | 21 | B.1.160 | 0.000437 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 7 | 21 | B.1.160 | 0.000218 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 20 | 20 | B.1.177 | 0.000263 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 20 | 20 | B.1.399 | 0.038685 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 19 | 19 | B.1.1.519 | 0.000755 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtA | 10 | 18 | AY.3 | 0.000099 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 8 | 18 | AY.3 | 0.00008 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 18 | 18 | AY.39 | 0.000445 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 16 | 16 | AY.75 | 0.000896 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 15 | 16 | B.1.526 | 0.000353 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtA | 1 | 16 | B.1.526 | 0.000024 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 14 | 14 | AY.120 | 0.000521 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 13 | 13 | B.1.351 | 0.000386 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 12 | 12 | B.1.621 | 0.001062 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 11 | 11 | B.1.525 | 0.001245 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 10 | 10 | AY.26 | 0.000283 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 9 | 10 | B.1.617.1 | 0.001161 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtA | 1 | 10 | B.1.617.1 | 0.000129 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 9 | 9 | AY.9.2 | 0.000331 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 5 | 9 | AY.98.1 | 0.000242 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtA | 4 | 9 | AY.98.1 | 0.000194 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 9 | 9 | P.2 | 0.00168 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 8 | 8 | B.1.1.306 | 0.003507 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 7 | 7 | AY.119 | 0.000247 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 6 | 6 | B.1.1.28 | 0.001867 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 6 | 6 | B.1.1.318 | 0.001811 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 5 | 5 | AY.109 | 0.003698 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 5 | 5 | AY.27 | 0.000324 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtA | 3 | 5 | AY.47 | 0.000093 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 2 | 5 | AY.47 | 0.000062 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 5 | 5 | B.1.621.1 | 0.002529 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 4 | 4 | AY.107 | 0.001864 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 2 | 4 | AY.20 | 0.000078 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtA | 2 | 4 | AY.20 | 0.000078 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 4 | 4 | AY.3.1 | 0.000341 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 4 | 4 | AY.60 | 0.003752 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 4 | 4 | AY.73 | 0.002661 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 4 | 4 | B.1.1.311 | 0.001433 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 4 | 4 | B.1.243 | 0.000278 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 4 | 4 | B.1.623 | 0.002146 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 3 | 4 | P.1.14 | 0.000143 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtA | 1 | 4 | P.1.14 | 0.000048 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 3 | AY.16 | 0.00038 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtC | 1 | 3 | AY.16 | 0.00038 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtA | 1 | 3 | AY.16 | 0.00038 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 3 | 3 | AY.23 | 0.000209 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtA | 3 | 3 | AY.4.2.1 | 0.000447 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 3 | 3 | AY.6 | 0.000123 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtA | 3 | 3 | B.1.160.10 | 0.024194 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtA | 2 | 3 | B.1.36 | 0.000292 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtC | 1 | 3 | B.1.36 | 0.000146 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 3 | 3 | C.37 | 0.000348 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtA | 3 | 3 | P.1.6 | 0.005837 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 2 | 2 | A | 0.000774 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 2 | 2 | AY.1 | 0.000791 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 2 | 2 | AY.14 | 0.000176 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 2 | 2 | AY.29 | 0.000032 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 2 | 2 | AY.33 | 0.000134 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 2 | 2 | AY.45 | 0.000243 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtC | 1 | 2 | AY.46 | 0.000104 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 2 | AY.46 | 0.000104 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 2 | 2 | AY.55 | 0.001835 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 2 | 2 | AY.61 | 0.00021 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 2 | 2 | AY.85 | 0.000854 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 2 | AY.98 | 0.000079 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtC | 1 | 2 | AY.98 | 0.000079 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 2 | 2 | AY.99.2 | 0.000184 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 2 | 2 | B.1.1.216 | 0.001781 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 2 | 2 | B.1.1.222 | 0.000408 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 2 | B.1.1.25 | 0.000569 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtC | 1 | 2 | B.1.1.25 | 0.000569 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 2 | 2 | B.1.1.261 | 0.017241 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtA | 2 | 2 | B.1.1.284 | 0.000215 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 2 | 2 | B.1.1.316 | 0.00185 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 2 | 2 | B.1.1.326 | 0.003521 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 2 | 2 | B.1.1.33 | 0.000842 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 2 | 2 | B.1.1.351 | 0.005587 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 2 | 2 | B.1.177.18 | 0.00232 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 2 | 2 | B.1.177.4 | 0.000422 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 2 | 2 | B.1.177.60 | 0.000437 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 2 | B.1.206 | 0.000816 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtA | 1 | 2 | B.1.206 | 0.000816 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 2 | 2 | B.1.221 | 0.000142 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 2 | 2 | B.1.453 | 0.006472 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 2 | 2 | B.1.575 | 0.000607 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtA | 2 | 2 | C.26 | 0.014706 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 2 | 2 | L.2 | 0.022727 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 2 | 2 | Q.8 | 0.00033 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtA | 1 | 1 | A.1 | 0.000282 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | A.2.5 | 0.000499 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | A.23 | 0.010526 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | A.3 | 0.002096 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | A.7 | 0.055556 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | AD.2 | 0.000219 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtC | 1 | 1 | AU.3 | 0.00211 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | AY.105 | 0.000643 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | AY.106 | 0.000335 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | AY.116 | 0.000287 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | AY.118 | 0.000063 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | AY.120.2.1 | 0.000498 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | AY.13 | 0.000161 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtC | 1 | 1 | AY.24 | 0.000431 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | AY.31 | 0.018519 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | AY.34.1 | 0.00051 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | AY.36 | 0.000148 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | AY.38 | 0.000499 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | AY.46.5 | 0.000198 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | AY.5.4 | 0.000277 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | AY.51 | 0.000909 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | AY.54 | 0.000095 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | AY.62 | 0.000436 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | AY.68 | 0.000274 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | AY.7.1 | 0.000113 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | AY.74 | 0.000116 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | AY.9 | 0.000068 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtA | 1 | 1 | AY.9.1 | 0.000084 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtA | 1 | 1 | AY.93 | 0.000273 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | AY.95 | 0.000761 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | B | 0.000128 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | B.1.1.189 | 0.001513 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | B.1.1.274 | 0.005051 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | B.1.1.282 | 0.011628 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | B.1.1.291 | 0.000742 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | B.1.1.297 | 0.002237 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | B.1.1.317 | 0.000412 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtA | 1 | 1 | B.1.1.369 | 0.000446 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtA | 1 | 1 | B.1.1.428 | 0.009434 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | B.1.1.434 | 0.000349 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtC | 1 | 1 | B.1.104 | 0.00369 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | B.1.110.3 | 0.000718 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | B.1.177.15 | 0.000631 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | B.1.177.24 | 0.001295 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | B.1.177.63 | 0.002703 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | B.1.177.75 | 0.001041 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | B.1.177.87 | 0.000728 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | B.1.201 | 0.005682 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | B.1.223 | 0.002778 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtC | 1 | 1 | B.1.234 | 0.000132 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | B.1.239 | 0.001221 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtA | 1 | 1 | B.1.245 | 0.03125 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtA | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | B.1.313 | 0.006579 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | B.1.315 | 0.006061 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtA | 1 | 1 | B.1.36.29 | 0.000517 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | B.1.382 | 0.008929 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | B.1.564 | 0.000426 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | B.1.577 | 0.000687 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | B.1.628 | 0.000352 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | B.1.634 | 0.003425 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | B.1.9.5 | 0.005682 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | B.3 | 0.000831 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | B.32 | 0.027027 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtC | 1 | 1 | B.40 | 0.000364 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | C.16 | 0.00106 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | P.1.17 | 0.000162 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | P.1.7 | 0.000319 |
ORF1ab/nsp3 | 1806 | V1806V | gtG | gtT | 1 | 1 | U.2 | 0.008772 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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