CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = V1603A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31603V1603AV2421AnonsyngTcgCc23210.9130437526-7528
ORF1ab/nsp31603V1603AV2421AnonsyngTCgCT2320.08695657526-7528

Details of the mutation V1603A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31603V1603AgTcgCc2123All0.000004
ORF1ab/nsp31603V1603AgTCgCT223All0
ORF1ab/nsp31603V1603AgTcgCc33AY.430.000013
ORF1ab/nsp31603V1603AgTCgCT220.111111
ORF1ab/nsp31603V1603AgTcgCc22B.10.000018
ORF1ab/nsp31603V1603AgTcgCc22B.1.1.70.000002
ORF1ab/nsp31603V1603AgTcgCc22B.1.4290.000047
ORF1ab/nsp31603V1603AgTcgCc11AY.1200.000037
ORF1ab/nsp31603V1603AgTcgCc11AY.250.000006
ORF1ab/nsp31603V1603AgTcgCc11AY.390.000025
ORF1ab/nsp31603V1603AgTcgCc11AY.420.00004
ORF1ab/nsp31603V1603AgTcgCc11AY.7.10.000113
ORF1ab/nsp31603V1603AgTcgCc11B.1.10.000018
ORF1ab/nsp31603V1603AgTcgCc11B.1.1.3060.000438
ORF1ab/nsp31603V1603AgTcgCc11B.1.1770.000013
ORF1ab/nsp31603V1603AgTcgCc11B.1.20.000009
ORF1ab/nsp31603V1603AgTcgCc11B.1.4000.000429
ORF1ab/nsp31603V1603AgTcgCc11B.1.4970.000315
ORF1ab/nsp31603V1603AgTcgCc11B.1.617.20.000004