CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = V1538del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31538V1538delV2356deldelGTA---848417331-7333

Details of the mutation V1538del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31538V1538delGTA---8484All0.000016
ORF1ab/nsp31538V1538delGTA---2121B.1.1.70.000019
ORF1ab/nsp31538V1538delGTA---88AY.430.000035
ORF1ab/nsp31538V1538delGTA---77B.1.617.20.000026
ORF1ab/nsp31538V1538delGTA---44B.10.000037
ORF1ab/nsp31538V1538delGTA---33AY.420.000121
ORF1ab/nsp31538V1538delGTA---33B.1.10.000054
ORF1ab/nsp31538V1538delGTA---22AY.120.20.002571
ORF1ab/nsp31538V1538delGTA---22AY.250.000012
ORF1ab/nsp31538V1538delGTA---22B.1.20.000018
ORF1ab/nsp31538V1538delGTA---22B.1.4970.00063
ORF1ab/nsp31538V1538delGTA---11AY.1030.000006
ORF1ab/nsp31538V1538delGTA---11AY.1130.000142
ORF1ab/nsp31538V1538delGTA---11AY.330.000067
ORF1ab/nsp31538V1538delGTA---11AY.40.000002
ORF1ab/nsp31538V1538delGTA---11AY.4.50.000107
ORF1ab/nsp31538V1538delGTA---11AY.440.000006
ORF1ab/nsp31538V1538delGTA---11AY.46.60.000072
ORF1ab/nsp31538V1538delGTA---11AY.50.000021
ORF1ab/nsp31538V1538delGTA---11AY.660.00107
ORF1ab/nsp31538V1538delGTA---11AY.750.000056
ORF1ab/nsp31538V1538delGTA---11AY.90.000068
ORF1ab/nsp31538V1538delGTA---11AY.9.20.000037
ORF1ab/nsp31538V1538delGTA---11B.1.1.2210.010101
ORF1ab/nsp31538V1538delGTA---11B.1.1.3060.000438
ORF1ab/nsp31538V1538delGTA---11B.1.1.3540.004386
ORF1ab/nsp31538V1538delGTA---11B.1.1.4480.002033
ORF1ab/nsp31538V1538delGTA---11B.1.1.460.004367
ORF1ab/nsp31538V1538delGTA---11B.1.1.5190.00004
ORF1ab/nsp31538V1538delGTA---11B.1.1150.021739
ORF1ab/nsp31538V1538delGTA---11B.1.1610.017241
ORF1ab/nsp31538V1538delGTA---11B.1.1770.000013
ORF1ab/nsp31538V1538delGTA---11B.1.2580.000067
ORF1ab/nsp31538V1538delGTA---11B.1.3510.00003
ORF1ab/nsp31538V1538delGTA---11B.1.4340.052632
ORF1ab/nsp31538V1538delGTA---11B.1.5250.000113
ORF1ab/nsp31538V1538delGTA---11B.1.575.10.002439
ORF1ab/nsp31538V1538delGTA---11B.1.617.10.000129
ORF1ab/nsp31538V1538delGTA---11B.1.6210.000089
ORF1ab/nsp31538V1538delGTA---11P.10.000016
ORF1ab/nsp31538V1538delGTA---11Q.80.000165