CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = V1538L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31538V1538LV2356LnonsynGtaTta81770.9506177331-7333
ORF1ab/nsp31538V1538LV2356LnonsynGtaCta8140.04938277331-7333

Details of the mutation V1538L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31538V1538LGtaTta7781All0.000015
ORF1ab/nsp31538V1538LGtaCta481All0.000001
ORF1ab/nsp31538V1538LGtaTta1111AY.40.000017
ORF1ab/nsp31538V1538LGtaTta99AY.1030.000056
ORF1ab/nsp31538V1538LGtaTta78B.1.617.20.000026
ORF1ab/nsp31538V1538LGtaCta18B.1.617.20.000004
ORF1ab/nsp31538V1538LGtaTta55AY.250.00003
ORF1ab/nsp31538V1538LGtaTta44AY.980.000316
ORF1ab/nsp31538V1538LGtaTta44B.1.177.120.000607
ORF1ab/nsp31538V1538LGtaTta330.166667
ORF1ab/nsp31538V1538LGtaTta33AY.540.000286
ORF1ab/nsp31538V1538LGtaTta33B.1.1.70.000003
ORF1ab/nsp31538V1538LGtaTta33P.10.000047
ORF1ab/nsp31538V1538LGtaTta22AY.430.000009
ORF1ab/nsp31538V1538LGtaTta22AY.50.000041
ORF1ab/nsp31538V1538LGtaTta22AY.690.000373
ORF1ab/nsp31538V1538LGtaTta22B.1.1.5190.000079
ORF1ab/nsp31538V1538LGtaTta22B.1.20.000018
ORF1ab/nsp31538V1538LGtaTta11AY.1000.000046
ORF1ab/nsp31538V1538LGtaTta11AY.290.000016
ORF1ab/nsp31538V1538LGtaTta11AY.30.00001
ORF1ab/nsp31538V1538LGtaTta11AY.330.000067
ORF1ab/nsp31538V1538LGtaTta11AY.39.10.00004
ORF1ab/nsp31538V1538LGtaTta11AY.440.000006
ORF1ab/nsp31538V1538LGtaCta11B.10.000009
ORF1ab/nsp31538V1538LGtaTta11B.1.1.2160.00089
ORF1ab/nsp31538V1538LGtaCta11B.1.1.4090.002833
ORF1ab/nsp31538V1538LGtaTta11B.1.1600.000031
ORF1ab/nsp31538V1538LGtaTta11B.1.1770.000013
ORF1ab/nsp31538V1538LGtaCta11B.1.2210.000071
ORF1ab/nsp31538V1538LGtaTta11B.1.2340.000132
ORF1ab/nsp31538V1538LGtaTta11B.1.2430.00007
ORF1ab/nsp31538V1538LGtaTta11B.1.36.310.001751
ORF1ab/nsp31538V1538LGtaTta11C.36.3.10.002717
ORF1ab/nsp31538V1538LGtaTta11D.20.000075
ORF1ab/nsp31538V1538LGtaTta11P.1.150.000232