CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = V1538A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31538V1538AV2356AnonsyngTagCa19819817331-7333

Details of the mutation V1538A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31538V1538AgTagCa198198All0.000038
ORF1ab/nsp31538V1538AgTagCa9090B.1.3551
ORF1ab/nsp31538V1538AgTagCa2020AY.440.000122
ORF1ab/nsp31538V1538AgTagCa1616B.1.5960.001394
ORF1ab/nsp31538V1538AgTagCa1212B.1.1.4860.018927
ORF1ab/nsp31538V1538AgTagCa77B.1.177.810.001325
ORF1ab/nsp31538V1538AgTagCa66AY.40.000009
ORF1ab/nsp31538V1538AgTagCa55B.10.000046
ORF1ab/nsp31538V1538AgTagCa55B.1.1.70.000004
ORF1ab/nsp31538V1538AgTagCa44AY.250.000024
ORF1ab/nsp31538V1538AgTagCa44AY.4.20.000087
ORF1ab/nsp31538V1538AgTagCa33B.1.5260.000071
ORF1ab/nsp31538V1538AgTagCa22AY.1140.000462
ORF1ab/nsp31538V1538AgTagCa22AY.1180.000125
ORF1ab/nsp31538V1538AgTagCa22AY.390.000049
ORF1ab/nsp31538V1538AgTagCa22B.1.617.20.000008
ORF1ab/nsp31538V1538AgTagCa22P.10.000032
ORF1ab/nsp31538V1538AgTagCa110.055556
ORF1ab/nsp31538V1538AgTagCa11AY.1190.000035
ORF1ab/nsp31538V1538AgTagCa11AY.4.50.000107
ORF1ab/nsp31538V1538AgTagCa11AY.420.00004
ORF1ab/nsp31538V1538AgTagCa11AY.430.000004
ORF1ab/nsp31538V1538AgTagCa11AY.50.000021
ORF1ab/nsp31538V1538AgTagCa11B0.000128
ORF1ab/nsp31538V1538AgTagCa11B.1.1.2140.000055
ORF1ab/nsp31538V1538AgTagCa11B.1.1.2410.00207
ORF1ab/nsp31538V1538AgTagCa11B.1.1.330.000421
ORF1ab/nsp31538V1538AgTagCa11B.1.20.000009
ORF1ab/nsp31538V1538AgTagCa11B.1.2340.000132
ORF1ab/nsp31538V1538AgTagCa11B.1.3690.000285
ORF1ab/nsp31538V1538AgTagCa11B.1.617.10.000129
ORF1ab/nsp31538V1538AgTagCa11B.1.6210.000089
ORF1ab/nsp31538V1538AgTagCa11D.20.000075