CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = V1522V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31522V1522VV2340VsyngtAgtG1691510.8934917283-7285
ORF1ab/nsp31522V1522VV2340VsyngtAgtT169120.07100597283-7285
ORF1ab/nsp31522V1522VV2340VsyngtAgtC16960.0355037283-7285

Details of the mutation V1522V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31522V1522VgtAgtG151169All0.000029
ORF1ab/nsp31522V1522VgtAgtT12169All0.000002
ORF1ab/nsp31522V1522VgtAgtC6169All0.000001
ORF1ab/nsp31522V1522VgtAgtG2727AY.40.000042
ORF1ab/nsp31522V1522VgtAgtG2023B.1.617.20.000075
ORF1ab/nsp31522V1522VgtAgtC223B.1.617.20.000008
ORF1ab/nsp31522V1522VgtAgtT123B.1.617.20.000004
ORF1ab/nsp31522V1522VgtAgtG1719B.1.1.70.000015
ORF1ab/nsp31522V1522VgtAgtT219B.1.1.70.000002
ORF1ab/nsp31522V1522VgtAgtG1313AY.250.000078
ORF1ab/nsp31522V1522VgtAgtG811B.1.10.000145
ORF1ab/nsp31522V1522VgtAgtT311B.1.10.000054
ORF1ab/nsp31522V1522VgtAgtG88AY.430.000035
ORF1ab/nsp31522V1522VgtAgtG88B.1.438.10.000858
ORF1ab/nsp31522V1522VgtAgtG44AY.1030.000025
ORF1ab/nsp31522V1522VgtAgtG44AY.470.000124
ORF1ab/nsp31522V1522VgtAgtG34B.10.000027
ORF1ab/nsp31522V1522VgtAgtT14B.10.000009
ORF1ab/nsp31522V1522VgtAgtG23AY.1020.000053
ORF1ab/nsp31522V1522VgtAgtT13AY.1020.000027
ORF1ab/nsp31522V1522VgtAgtG33AY.30.00003
ORF1ab/nsp31522V1522VgtAgtG33AY.4.20.000065
ORF1ab/nsp31522V1522VgtAgtG33AY.440.000018
ORF1ab/nsp31522V1522VgtAgtG33B.1.1770.00004
ORF1ab/nsp31522V1522VgtAgtG33B.1.6370.000219
ORF1ab/nsp31522V1522VgtAgtT220.111111
ORF1ab/nsp31522V1522VgtAgtG22B.1.214.20.001199
ORF1ab/nsp31522V1522VgtAgtG22B.1.5260.000047
ORF1ab/nsp31522V1522VgtAgtG11A0.000387
ORF1ab/nsp31522V1522VgtAgtG11AY.1000.000046
ORF1ab/nsp31522V1522VgtAgtG11AY.1090.00074
ORF1ab/nsp31522V1522VgtAgtG11AY.1170.000085
ORF1ab/nsp31522V1522VgtAgtG11AY.230.00007
ORF1ab/nsp31522V1522VgtAgtG11AY.290.000016
ORF1ab/nsp31522V1522VgtAgtC11AY.390.000025
ORF1ab/nsp31522V1522VgtAgtG11AY.410.000294
ORF1ab/nsp31522V1522VgtAgtT11AY.690.000187
ORF1ab/nsp31522V1522VgtAgtG11AY.740.000116
ORF1ab/nsp31522V1522VgtAgtC11B.1.1.330.000421
ORF1ab/nsp31522V1522VgtAgtG11B.1.1.5190.00004
ORF1ab/nsp31522V1522VgtAgtC11B.1.1240.007812
ORF1ab/nsp31522V1522VgtAgtG11B.1.177.160.000664
ORF1ab/nsp31522V1522VgtAgtG11B.1.20.000009
ORF1ab/nsp31522V1522VgtAgtG11B.1.2210.000071
ORF1ab/nsp31522V1522VgtAgtG11B.1.2650.001271
ORF1ab/nsp31522V1522VgtAgtG11B.1.3510.00003
ORF1ab/nsp31522V1522VgtAgtG11B.1.3990.001934
ORF1ab/nsp31522V1522VgtAgtG11B.1.4000.000429
ORF1ab/nsp31522V1522VgtAgtT11B.1.617.10.000129
ORF1ab/nsp31522V1522VgtAgtG11B.1.6270.00202
ORF1ab/nsp31522V1522VgtAgtC11C.350.000774
ORF1ab/nsp31522V1522VgtAgtG11P.10.000016