CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = V1388del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31388V1388delV2206deldelGTC---24224216881-6883

Details of the mutation V1388del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31388V1388delGTC---242242All0.000046
ORF1ab/nsp31388V1388delGTC---7676B.1.1.70.000068
ORF1ab/nsp31388V1388delGTC---1515AY.40.000023
ORF1ab/nsp31388V1388delGTC---1515B.10.000137
ORF1ab/nsp31388V1388delGTC---1515B.1.1770.000198
ORF1ab/nsp31388V1388delGTC---1212B.1.20.000106
ORF1ab/nsp31388V1388delGTC---88B.1.10.000145
ORF1ab/nsp31388V1388delGTC---55AY.4.50.000537
ORF1ab/nsp31388V1388delGTC---55AY.430.000022
ORF1ab/nsp31388V1388delGTC---55B.1.617.20.000019
ORF1ab/nsp31388V1388delGTC---440.222222
ORF1ab/nsp31388V1388delGTC---44B.1.2210.000284
ORF1ab/nsp31388V1388delGTC---33B.1.2580.0002
ORF1ab/nsp31388V1388delGTC---33B.1.5170.001281
ORF1ab/nsp31388V1388delGTC---33B.1.5250.000339
ORF1ab/nsp31388V1388delGTC---33B.1.5960.000261
ORF1ab/nsp31388V1388delGTC---33P.10.000047
ORF1ab/nsp31388V1388delGTC---22A.2.40.006734
ORF1ab/nsp31388V1388delGTC---22AY.46.20.001271
ORF1ab/nsp31388V1388delGTC---22B.1.177.180.00232
ORF1ab/nsp31388V1388delGTC---22B.1.3110.000549
ORF1ab/nsp31388V1388delGTC---11A0.000387
ORF1ab/nsp31388V1388delGTC---11A.280.002646
ORF1ab/nsp31388V1388delGTC---11AV.10.005051
ORF1ab/nsp31388V1388delGTC---11AY.1000.000046
ORF1ab/nsp31388V1388delGTC---11AY.240.000431
ORF1ab/nsp31388V1388delGTC---11AY.360.000148
ORF1ab/nsp31388V1388delGTC---11AY.390.000025
ORF1ab/nsp31388V1388delGTC---11AY.460.000104
ORF1ab/nsp31388V1388delGTC---11AY.470.000031
ORF1ab/nsp31388V1388delGTC---11AY.50.000021
ORF1ab/nsp31388V1388delGTC---11AY.600.000938
ORF1ab/nsp31388V1388delGTC---11AY.680.000274
ORF1ab/nsp31388V1388delGTC---11AY.730.000665
ORF1ab/nsp31388V1388delGTC---11AY.75.10.00018
ORF1ab/nsp31388V1388delGTC---11AY.9.20.000037
ORF1ab/nsp31388V1388delGTC---11B0.000128
ORF1ab/nsp31388V1388delGTC---11B.1.1.1920.002309
ORF1ab/nsp31388V1388delGTC---11B.1.1.2180.007692
ORF1ab/nsp31388V1388delGTC---11B.1.1.3110.000358
ORF1ab/nsp31388V1388delGTC---11B.1.1.3120.001912
ORF1ab/nsp31388V1388delGTC---11B.1.1.3150.008475
ORF1ab/nsp31388V1388delGTC---11B.1.1.3480.000796
ORF1ab/nsp31388V1388delGTC---11B.1.1.4090.002833
ORF1ab/nsp31388V1388delGTC---11B.1.1.700.000341
ORF1ab/nsp31388V1388delGTC---11B.1.1600.000031
ORF1ab/nsp31388V1388delGTC---11B.1.177.150.000631
ORF1ab/nsp31388V1388delGTC---11B.1.177.160.000664
ORF1ab/nsp31388V1388delGTC---11B.1.177.540.000606
ORF1ab/nsp31388V1388delGTC---11B.1.177.560.000668
ORF1ab/nsp31388V1388delGTC---11B.1.177.570.000281
ORF1ab/nsp31388V1388delGTC---11B.1.177.60.000977
ORF1ab/nsp31388V1388delGTC---11B.1.177.620.001192
ORF1ab/nsp31388V1388delGTC---11B.1.177.680.015152
ORF1ab/nsp31388V1388delGTC---11B.1.177.70.000165
ORF1ab/nsp31388V1388delGTC---11B.1.177.810.000189
ORF1ab/nsp31388V1388delGTC---11B.1.177.870.000728
ORF1ab/nsp31388V1388delGTC---11B.1.177.90.001332
ORF1ab/nsp31388V1388delGTC---11B.1.3510.00003
ORF1ab/nsp31388V1388delGTC---11B.1.36.220.001208
ORF1ab/nsp31388V1388delGTC---11B.1.416.10.001563
ORF1ab/nsp31388V1388delGTC---11B.1.5750.000303
ORF1ab/nsp31388V1388delGTC---11B.1.617.10.000129
ORF1ab/nsp31388V1388delGTC---11B.1.6210.000089
ORF1ab/nsp31388V1388delGTC---11B.1.621.10.000506
ORF1ab/nsp31388V1388delGTC---11B.1.6300.005236
ORF1ab/nsp31388V1388delGTC---11B.1.6370.000073
ORF1ab/nsp31388V1388delGTC---11B.340.013699
ORF1ab/nsp31388V1388delGTC---11B.4.40.018868
ORF1ab/nsp31388V1388delGTC---11B.400.000364
ORF1ab/nsp31388V1388delGTC---11P.1.150.000232
ORF1ab/nsp31388V1388delGTC---11P.20.000187
ORF1ab/nsp31388V1388delGTC---11Q.10.000126
ORF1ab/nsp31388V1388delGTC---11Q.40.000455
ORF1ab/nsp31388V1388delGTC---11Q.80.000165
ORF1ab/nsp31388V1388delGTC---11U.30.003861