CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp3 | 1388 | V1388V | V2206V | syn | gtC | gtT | 5500 | 5441 | 0.989273 | 6881-6883 |
ORF1ab/nsp3 | 1388 | V1388V | V2206V | syn | gtC | gtA | 5500 | 56 | 0.0101818 | 6881-6883 |
ORF1ab/nsp3 | 1388 | V1388V | V2206V | syn | gtC | gtG | 5500 | 3 | 0.000545455 | 6881-6883 |
Details of the mutation V1388V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 5441 | 5500 | All | 0.001041 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtA | 56 | 5500 | All | 0.000011 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtG | 3 | 5500 | All | 0.000001 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1775 | 1776 | AY.39 | 0.043863 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtA | 1 | 1776 | AY.39 | 0.000025 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 718 | 718 | B.1.1.294 | 0.908861 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 643 | 643 | AY.39.2 | 0.990755 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 481 | 481 | B.1.1.7 | 0.000431 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 246 | 247 | AY.103 | 0.001527 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtA | 1 | 247 | AY.103 | 0.000006 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 168 | 168 | AY.46.6 | 0.012131 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 148 | 154 | B.1.2 | 0.001303 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtA | 6 | 154 | B.1.2 | 0.000053 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 149 | 150 | B.1.617.2 | 0.000561 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtA | 1 | 150 | B.1.617.2 | 0.000004 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 122 | 122 | B.1.526 | 0.002868 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 91 | 93 | AY.4 | 0.000142 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtA | 2 | 93 | AY.4 | 0.000003 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 62 | 63 | AY.43 | 0.000275 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtA | 1 | 63 | AY.43 | 0.000004 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 53 | 54 | B.1.1 | 0.000961 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtA | 1 | 54 | B.1.1 | 0.000018 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 52 | 52 | B.1.363 | 0.675325 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 42 | 42 | AY.25 | 0.000253 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 42 | 42 | M.1 | 0.976744 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 34 | 36 | B.1 | 0.000311 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtA | 2 | 36 | B.1 | 0.000018 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 35 | 35 | P.1 | 0.000551 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 28 | 31 | AY.3 | 0.000278 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtG | 2 | 31 | AY.3 | 0.00002 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtA | 1 | 31 | AY.3 | 0.00001 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 30 | 31 | AY.44 | 0.000183 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtA | 1 | 31 | AY.44 | 0.000006 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 28 | 28 | AY.39.1 | 0.001109 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 20 | 24 | AY.121 | 0.002706 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtA | 4 | 24 | AY.121 | 0.000541 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 13 | 24 | AY.9.2 | 0.000477 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtA | 11 | 24 | AY.9.2 | 0.000404 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 23 | 23 | AY.20 | 0.000894 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 18 | 18 | Q.2 | 0.011043 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 15 | 16 | AY.102 | 0.000398 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtA | 1 | 16 | AY.102 | 0.000027 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 16 | 16 | B.1.635 | 0.280702 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 14 | 15 | AY.26 | 0.000396 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtA | 1 | 15 | AY.26 | 0.000028 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 12 | 13 | B.1.351 | 0.000357 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtA | 1 | 13 | B.1.351 | 0.00003 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 13 | 13 | M.3 | 1 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtA | 8 | 12 | B.1.429 | 0.000188 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 4 | 12 | B.1.429 | 0.000094 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 11 | 11 | AY.100 | 0.000506 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 10 | 11 | B.1.177 | 0.000132 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtA | 1 | 11 | B.1.177 | 0.000013 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 8 | 9 | AY.3.1 | 0.000682 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtA | 1 | 9 | AY.3.1 | 0.000085 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 9 | 9 | B.1.177.51 | 0.041096 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 9 | 9 | M.2 | 0.75 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 8 | 8 | AY.119 | 0.000282 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 8 | 8 | AY.61 | 0.000838 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 8 | 8 | B.1.126 | 0.010204 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 8 | 8 | P.1.10 | 0.002156 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 7 | 7 | AY.4.2 | 0.000152 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 6 | 7 | B.1.1.519 | 0.000238 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtA | 1 | 7 | B.1.1.519 | 0.00004 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 6 | 6 | B.1.1.28 | 0.001867 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 6 | 6 | B.1.1.305 | 0.023166 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 6 | 6 | B.1.177.11 | 0.010187 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 6 | 6 | B.1.234 | 0.000792 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 6 | 6 | C.37 | 0.000696 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 5 | 5 | AY.117 | 0.000423 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 5 | 5 | AY.23 | 0.000349 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 5 | 5 | AY.33 | 0.000334 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 5 | 5 | AY.46 | 0.00052 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 5 | 5 | AY.98 | 0.000395 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 5 | 5 | B.1.1.306 | 0.002192 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 4 | 4 | AY.36 | 0.000593 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 4 | 4 | AY.42 | 0.000161 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 3 | 4 | AY.9.1 | 0.000251 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtG | 1 | 4 | AY.9.1 | 0.000084 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 4 | 4 | B.1.1.232 | 0.00726 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 4 | 4 | B.1.177.81 | 0.000757 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 4 | 4 | B.1.587 | 0.00759 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 4 | 4 | B.1.637 | 0.000292 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 3 | 3 | AY.110 | 0.000338 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 3 | 3 | AY.118 | 0.000188 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 3 | 3 | AY.120 | 0.000112 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 3 | 3 | AY.16 | 0.001139 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 3 | 3 | AY.27 | 0.000194 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 3 | 3 | AY.29 | 0.000047 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 3 | 3 | AY.4.2.1 | 0.000447 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 3 | 3 | AY.47 | 0.000093 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 3 | 3 | AY.5 | 0.000062 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 3 | 3 | AY.65 | 0.001599 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 3 | 3 | AY.75.1 | 0.000541 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 3 | 3 | AY.91 | 0.002191 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 2 | 3 | AY.99.2 | 0.000184 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtA | 1 | 3 | AY.99.2 | 0.000092 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 3 | 3 | B.1.1.161 | 0.010601 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 2 | 3 | B.1.1.214 | 0.000111 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtA | 1 | 3 | B.1.1.214 | 0.000055 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 3 | 3 | B.1.1.277 | 0.002276 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 3 | 3 | B.1.1.416 | 0.002715 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 3 | 3 | B.1.220 | 0.032609 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 3 | 3 | B.1.258 | 0.0002 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 3 | 3 | B.1.36.22 | 0.003623 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtA | 2 | 3 | P.1.17 | 0.000324 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 3 | P.1.17 | 0.000162 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 3 | 3 | P.2 | 0.00056 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 2 | A | 0.000387 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtA | 1 | 2 | A | 0.000387 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 2 | 2 | AY.111 | 0.000366 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 2 | 2 | AY.113 | 0.000285 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 2 | 2 | AY.4.5 | 0.000215 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 2 | 2 | AY.5.4 | 0.000553 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 2 | 2 | AY.59 | 0.001059 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 2 | 2 | AY.6 | 0.000082 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 2 | 2 | AY.74 | 0.000231 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 2 | 2 | AY.84 | 0.000875 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 2 | 2 | B.1.1.10 | 0.00223 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 2 | 2 | B.1.1.176 | 0.000879 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 2 | 2 | B.1.1.289 | 0.004167 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 2 | 2 | B.1.1.333 | 0.002153 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 2 | 2 | B.1.1.434 | 0.000697 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 2 | 2 | B.1.1.464 | 0.002946 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 2 | 2 | B.1.36.18 | 0.00084 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 2 | 2 | B.1.427 | 0.000101 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 2 | 2 | B.1.445 | 0.023529 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 2 | 2 | B.1.497 | 0.00063 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 2 | 2 | B.1.596 | 0.000174 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 2 | 2 | C.36 | 0.001821 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 2 | 2 | Q.8 | 0.00033 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | 0.055556 | |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | A.18 | 0.05 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | A.2.5 | 0.000499 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | AY.1 | 0.000396 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | AY.105 | 0.000643 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | AY.108 | 0.001103 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | AY.11 | 0.001339 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | AY.16.1 | 0.00047 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | AY.2 | 0.000356 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | AY.24 | 0.000431 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | AY.32 | 0.000532 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | AY.48 | 0.000465 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | AY.60 | 0.000938 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtA | 1 | 1 | AY.7 | 0.000196 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | AY.7.1 | 0.000113 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | AY.81 | 0.001992 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | AY.88 | 0.000884 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | AY.92 | 0.000287 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | AZ.1 | 0.000867 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | B | 0.000128 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | B.1.1.284 | 0.000107 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | B.1.1.307 | 0.002532 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtA | 1 | 1 | B.1.1.316 | 0.000925 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | B.1.1.336 | 0.016667 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | B.1.1.376 | 0.005952 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | B.1.1.486 | 0.001577 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | B.1.1.63 | 0.000386 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | B.1.104 | 0.00369 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | B.1.115 | 0.021739 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtA | 1 | 1 | B.1.128 | 0.000635 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | B.1.149 | 0.003425 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | B.1.177.21 | 0.000076 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtA | 1 | 1 | B.1.177.32 | 0.00135 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | B.1.177.35 | 0.000691 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | B.1.177.57 | 0.000281 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | B.1.177.65 | 0.000665 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | B.1.221.1 | 0.002907 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | B.1.243 | 0.00007 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | B.1.258.17 | 0.000104 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | B.1.36.28 | 0.005747 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtA | 1 | 1 | B.1.375 | 0.00082 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | B.1.404 | 0.001302 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | B.1.426 | 0.001009 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | B.1.438.1 | 0.000107 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | B.1.448 | 0.002625 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | B.1.462 | 0.007246 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | B.1.468 | 0.005714 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | B.1.499 | 0.00105 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | B.1.543 | 0.01 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | B.1.548 | 0.035714 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | B.1.551 | 0.00129 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | B.1.575 | 0.000303 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | B.1.621.1 | 0.000506 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | N.5 | 0.001767 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | P.1.15 | 0.000232 |
ORF1ab/nsp3 | 1388 | V1388V | gtC | gtT | 1 | 1 | Q.1 | 0.000126 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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