CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = V1388I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31388V1388IV2206InonsynGtcAtc9569530.9968626881-6883
ORF1ab/nsp31388V1388IV2206InonsynGtCAtT95630.003138086881-6883

Details of the mutation V1388I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31388V1388IGtcAtc953956All0.000182
ORF1ab/nsp31388V1388IGtCAtT3956All0.000001
ORF1ab/nsp31388V1388IGtcAtc817818B.1.1.70.000731
ORF1ab/nsp31388V1388IGtCAtT1818B.1.1.70.000001
ORF1ab/nsp31388V1388IGtcAtc3535Q.10.004421
ORF1ab/nsp31388V1388IGtcAtc2021B.1.617.20.000075
ORF1ab/nsp31388V1388IGtCAtT121B.1.617.20.000004
ORF1ab/nsp31388V1388IGtcAtc1818AY.250.000108
ORF1ab/nsp31388V1388IGtcAtc88B.10.000073
ORF1ab/nsp31388V1388IGtcAtc77AY.200.000272
ORF1ab/nsp31388V1388IGtcAtc66B.1.20.000053
ORF1ab/nsp31388V1388IGtcAtc55AY.40.000008
ORF1ab/nsp31388V1388IGtcAtc44AY.430.000018
ORF1ab/nsp31388V1388IGtcAtc44AY.440.000024
ORF1ab/nsp31388V1388IGtcAtc33AY.60.000123
ORF1ab/nsp31388V1388IGtcAtc33B.1.10.000054
ORF1ab/nsp31388V1388IGtCAtT120.055556
ORF1ab/nsp31388V1388IGtcAtc120.055556
ORF1ab/nsp31388V1388IGtcAtc22AY.1030.000012
ORF1ab/nsp31388V1388IGtcAtc22AY.1180.000125
ORF1ab/nsp31388V1388IGtcAtc22AY.330.000134
ORF1ab/nsp31388V1388IGtcAtc11AY.1190.000035
ORF1ab/nsp31388V1388IGtcAtc11AY.320.000532
ORF1ab/nsp31388V1388IGtcAtc11AY.390.000025
ORF1ab/nsp31388V1388IGtcAtc11AY.4.20.000022
ORF1ab/nsp31388V1388IGtcAtc11AY.450.000122
ORF1ab/nsp31388V1388IGtcAtc11AY.460.000104
ORF1ab/nsp31388V1388IGtcAtc11AY.70.000196
ORF1ab/nsp31388V1388IGtcAtc11AY.930.000273
ORF1ab/nsp31388V1388IGtcAtc11B.1.1.5190.00004
ORF1ab/nsp31388V1388IGtcAtc11B.1.177.150.000631
ORF1ab/nsp31388V1388IGtcAtc11B.1.2390.001221
ORF1ab/nsp31388V1388IGtcAtc11B.1.360.000146
ORF1ab/nsp31388V1388IGtcAtc11B.1.36.180.00042
ORF1ab/nsp31388V1388IGtcAtc11B.1.4290.000024
ORF1ab/nsp31388V1388IGtcAtc11B.1.5670.003333
ORF1ab/nsp31388V1388IGtcAtc11Q.80.000165