CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = V1388A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31388V1388AV2206AnonsyngTcgCc91870.9560446881-6883
ORF1ab/nsp31388V1388AV2206AnonsyngTCgCT9140.0439566881-6883

Details of the mutation V1388A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31388V1388AgTcgCc8791All0.000017
ORF1ab/nsp31388V1388AgTCgCT491All0.000001
ORF1ab/nsp31388V1388AgTcgCc1212B.1.6370.000877
ORF1ab/nsp31388V1388AgTcgCc1010B.1.177.90.013316
ORF1ab/nsp31388V1388AgTcgCc99B.10.000082
ORF1ab/nsp31388V1388AgTcgCc79B.1.1.70.000006
ORF1ab/nsp31388V1388AgTCgCT29B.1.1.70.000002
ORF1ab/nsp31388V1388AgTcgCc77P.1.70.002235
ORF1ab/nsp31388V1388AgTcgCc44AZ.10.003469
ORF1ab/nsp31388V1388AgTcgCc33AY.1190.000106
ORF1ab/nsp31388V1388AgTcgCc33AY.390.000074
ORF1ab/nsp31388V1388AgTcgCc33AY.40.000005
ORF1ab/nsp31388V1388AgTcgCc33AY.430.000013
ORF1ab/nsp31388V1388AgTCgCT23B.1.3510.000059
ORF1ab/nsp31388V1388AgTcgCc13B.1.3510.00003
ORF1ab/nsp31388V1388AgTcgCc22AY.1030.000012
ORF1ab/nsp31388V1388AgTcgCc22B.1.177.450.000762
ORF1ab/nsp31388V1388AgTcgCc11A0.000387
ORF1ab/nsp31388V1388AgTcgCc11AY.1000.000046
ORF1ab/nsp31388V1388AgTcgCc11AY.330.000067
ORF1ab/nsp31388V1388AgTcgCc11AY.350.000233
ORF1ab/nsp31388V1388AgTcgCc11AY.420.00004
ORF1ab/nsp31388V1388AgTcgCc11AY.50.000021
ORF1ab/nsp31388V1388AgTcgCc11B.1.10.000018
ORF1ab/nsp31388V1388AgTcgCc11B.1.1.2310.003096
ORF1ab/nsp31388V1388AgTcgCc11B.1.1.3060.000438
ORF1ab/nsp31388V1388AgTcgCc11B.1.1.3170.000412
ORF1ab/nsp31388V1388AgTcgCc11B.1.1.390.00051
ORF1ab/nsp31388V1388AgTcgCc11B.1.1.470.005348
ORF1ab/nsp31388V1388AgTcgCc11B.1.1.4860.001577
ORF1ab/nsp31388V1388AgTcgCc11B.1.1040.00369
ORF1ab/nsp31388V1388AgTcgCc11B.1.177.440.000519
ORF1ab/nsp31388V1388AgTcgCc11B.1.2430.00007
ORF1ab/nsp31388V1388AgTcgCc11B.1.4290.000024
ORF1ab/nsp31388V1388AgTcgCc11B.1.5360.02381
ORF1ab/nsp31388V1388AgTcgCc11B.1.6090.000479
ORF1ab/nsp31388V1388AgTcgCc11B.1.617.20.000004
ORF1ab/nsp31388V1388AgTcgCc11B.1.619.10.000641