CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = V12V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp312V12VV830VsyngtGgtT322630370.9414142753-2755
ORF1ab/nsp312V12VV830VsyngtGgtA32261430.04432732753-2755
ORF1ab/nsp312V12VV830VsyngtGgtC3226460.01425912753-2755

Details of the mutation V12V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp312V12VgtGgtT30373226All0.000581
ORF1ab/nsp312V12VgtGgtA1433226All0.000027
ORF1ab/nsp312V12VgtGgtC463226All0.000009
ORF1ab/nsp312V12VgtGgtT670682AY.400.646095
ORF1ab/nsp312V12VgtGgtA6682AY.400.005786
ORF1ab/nsp312V12VgtGgtC6682AY.400.005786
ORF1ab/nsp312V12VgtGgtT468489B.1.1.70.000419
ORF1ab/nsp312V12VgtGgtA20489B.1.1.70.000018
ORF1ab/nsp312V12VgtGgtC1489B.1.1.70.000001
ORF1ab/nsp312V12VgtGgtT340350AY.40.000529
ORF1ab/nsp312V12VgtGgtA9350AY.40.000014
ORF1ab/nsp312V12VgtGgtC1350AY.40.000002
ORF1ab/nsp312V12VgtGgtT320324AY.4.20.00694
ORF1ab/nsp312V12VgtGgtC4324AY.4.20.000087
ORF1ab/nsp312V12VgtGgtT123123B.1.177.450.046893
ORF1ab/nsp312V12VgtGgtT6784B.10.000614
ORF1ab/nsp312V12VgtGgtC1084B.10.000092
ORF1ab/nsp312V12VgtGgtA784B.10.000064
ORF1ab/nsp312V12VgtGgtT7676AY.1200.002826
ORF1ab/nsp312V12VgtGgtT7475AY.250.000445
ORF1ab/nsp312V12VgtGgtC175AY.250.000006
ORF1ab/nsp312V12VgtGgtA7373B.1.1600.002277
ORF1ab/nsp312V12VgtGgtT6363B.1.5690.913043
ORF1ab/nsp312V12VgtGgtT5656B.1.2430.003897
ORF1ab/nsp312V12VgtGgtT4053AY.430.000177
ORF1ab/nsp312V12VgtGgtC1353AY.430.000058
ORF1ab/nsp312V12VgtGgtT4649B.1.1770.000606
ORF1ab/nsp312V12VgtGgtA349B.1.1770.00004
ORF1ab/nsp312V12VgtGgtT4143B.1.617.20.000154
ORF1ab/nsp312V12VgtGgtC243B.1.617.20.000008
ORF1ab/nsp312V12VgtGgtT4141B.1.20.000361
ORF1ab/nsp312V12VgtGgtT3237AY.1030.000199
ORF1ab/nsp312V12VgtGgtC337AY.1030.000019
ORF1ab/nsp312V12VgtGgtA237AY.1030.000012
ORF1ab/nsp312V12VgtGgtT3131AY.440.000189
ORF1ab/nsp312V12VgtGgtT3131B.1.1.2630.048287
ORF1ab/nsp312V12VgtGgtT2727AY.290.000426
ORF1ab/nsp312V12VgtGgtT2626AY.9.20.000955
ORF1ab/nsp312V12VgtGgtT2424B.1.2400.005174
ORF1ab/nsp312V12VgtGgtT2124P.10.000331
ORF1ab/nsp312V12VgtGgtA324P.10.000047
ORF1ab/nsp312V12VgtGgtT2020AY.130.00322
ORF1ab/nsp312V12VgtGgtT1719AY.30.000169
ORF1ab/nsp312V12VgtGgtC119AY.30.00001
ORF1ab/nsp312V12VgtGgtA119AY.30.00001
ORF1ab/nsp312V12VgtGgtT1515B.1.177.570.004215
ORF1ab/nsp312V12VgtGgtT1414B.1.10.000254
ORF1ab/nsp312V12VgtGgtT1414B.1.1.390.007136
ORF1ab/nsp312V12VgtGgtT1313AY.50.000268
ORF1ab/nsp312V12VgtGgtT1212AY.99.20.001106
ORF1ab/nsp312V12VgtGgtT1010AY.260.000283
ORF1ab/nsp312V12VgtGgtT1010B.1.351.50.005995
ORF1ab/nsp312V12VgtGgtT99AY.1170.000761
ORF1ab/nsp312V12VgtGgtT99P.20.00168
ORF1ab/nsp312V12VgtGgtT88AY.390.000198
ORF1ab/nsp312V12VgtGgtT88AY.740.000925
ORF1ab/nsp312V12VgtGgtT88B.1.1.3540.035088
ORF1ab/nsp312V12VgtGgtT77AY.200.000272
ORF1ab/nsp312V12VgtGgtT77AY.29.10.001544
ORF1ab/nsp312V12VgtGgtT77B.1.1.2320.012704
ORF1ab/nsp312V12VgtGgtT77B.1.1.370.00135
ORF1ab/nsp312V12VgtGgtT77B.1.1.4320.008861
ORF1ab/nsp312V12VgtGgtT77B.1.5260.000165
ORF1ab/nsp312V12VgtGgtT66B.1.6090.002876
ORF1ab/nsp312V12VgtGgtT66C.36.30.003403
ORF1ab/nsp312V12VgtGgtT55AY.1060.001674
ORF1ab/nsp312V12VgtGgtT55AY.4.2.10.000745
ORF1ab/nsp312V12VgtGgtA55B.1.1.1570.004566
ORF1ab/nsp312V12VgtGgtT55B.1.1.2160.004452
ORF1ab/nsp312V12VgtGgtT55B.1.1.2220.00102
ORF1ab/nsp312V12VgtGgtT55B.1.351.20.001513
ORF1ab/nsp312V12VgtGgtT55P.1.100.001347
ORF1ab/nsp312V12VgtGgtA44AY.120.10.001284
ORF1ab/nsp312V12VgtGgtT44AY.450.000487
ORF1ab/nsp312V12VgtGgtT44AY.46.60.000289
ORF1ab/nsp312V12VgtGgtT44AY.700.000834
ORF1ab/nsp312V12VgtGgtT34B.1.1.2140.000166
ORF1ab/nsp312V12VgtGgtA14B.1.1.2140.000055
ORF1ab/nsp312V12VgtGgtT44B.1.36.80.004
ORF1ab/nsp312V12VgtGgtT44B.1.621.10.002023
ORF1ab/nsp312V12VgtGgtT44C.370.000464
ORF1ab/nsp312V12VgtGgtT33A.2.50.001497
ORF1ab/nsp312V12VgtGgtT23AY.1190.000071
ORF1ab/nsp312V12VgtGgtA13AY.1190.000035
ORF1ab/nsp312V12VgtGgtT33AY.320.001597
ORF1ab/nsp312V12VgtGgtT33AY.4.50.000322
ORF1ab/nsp312V12VgtGgtT33AY.98.10.000145
ORF1ab/nsp312V12VgtGgtT33B.1.2140.010989
ORF1ab/nsp312V12VgtGgtT33B.1.3510.000089
ORF1ab/nsp312V12VgtGgtT33B.1.5250.000339
ORF1ab/nsp312V12VgtGgtT33B.1.617.10.000387
ORF1ab/nsp312V12VgtGgtT33B.1.930.002801
ORF1ab/nsp312V12VgtGgtT33C.360.002732
ORF1ab/nsp312V12VgtGgtA23P.1.140.000096
ORF1ab/nsp312V12VgtGgtT13P.1.140.000048
ORF1ab/nsp312V12VgtGgtT22AY.230.000139
ORF1ab/nsp312V12VgtGgtT22AY.340.000194
ORF1ab/nsp312V12VgtGgtT22AY.370.000632
ORF1ab/nsp312V12VgtGgtT22AY.60.000082
ORF1ab/nsp312V12VgtGgtT22AY.750.000112
ORF1ab/nsp312V12VgtGgtT12B.1.1.10.000327
ORF1ab/nsp312V12VgtGgtC12B.1.1.10.000327
ORF1ab/nsp312V12VgtGgtT22B.1.1.250.001137
ORF1ab/nsp312V12VgtGgtT22B.1.1.3120.003824
ORF1ab/nsp312V12VgtGgtT22B.1.1.3200.036364
ORF1ab/nsp312V12VgtGgtT22B.1.1.3480.001592
ORF1ab/nsp312V12VgtGgtT22B.1.1.5190.000079
ORF1ab/nsp312V12VgtGgtT22B.1.177.70.00033
ORF1ab/nsp312V12VgtGgtT22B.1.177.810.000379
ORF1ab/nsp312V12VgtGgtT22B.1.3490.00143
ORF1ab/nsp312V12VgtGgtT22B.1.36.190.018519
ORF1ab/nsp312V12VgtGgtT22B.1.36.290.001035
ORF1ab/nsp312V12VgtGgtT22B.1.4520.027397
ORF1ab/nsp312V12VgtGgtT22B.30.001661
ORF1ab/nsp312V12VgtGgtT22C.80.008929
ORF1ab/nsp312V12VgtGgtT22P.1.150.000465
ORF1ab/nsp312V12VgtGgtT22P.1.17.10.00175
ORF1ab/nsp312V12VgtGgtT22P.1.40.001953
ORF1ab/nsp312V12VgtGgtT22Q.80.00033
ORF1ab/nsp312V12VgtGgtT11A.2.5.10.004808
ORF1ab/nsp312V12VgtGgtT11AY.1010.00049
ORF1ab/nsp312V12VgtGgtC11AY.120.20.001285
ORF1ab/nsp312V12VgtGgtT11AY.190.00114
ORF1ab/nsp312V12VgtGgtT11AY.23.10.000417
ORF1ab/nsp312V12VgtGgtT11AY.270.000065
ORF1ab/nsp312V12VgtGgtT11AY.34.10.00051
ORF1ab/nsp312V12VgtGgtT11AY.380.000499
ORF1ab/nsp312V12VgtGgtT11AY.4.10.000737
ORF1ab/nsp312V12VgtGgtT11AY.420.00004
ORF1ab/nsp312V12VgtGgtT11AY.460.000104
ORF1ab/nsp312V12VgtGgtT11AY.470.000031
ORF1ab/nsp312V12VgtGgtT11AY.5.30.000337
ORF1ab/nsp312V12VgtGgtT11AY.610.000105
ORF1ab/nsp312V12VgtGgtT11AY.90.000068
ORF1ab/nsp312V12VgtGgtT11AY.920.000287
ORF1ab/nsp312V12VgtGgtT11AY.940.000443
ORF1ab/nsp312V12VgtGgtC11AY.960.002075
ORF1ab/nsp312V12VgtGgtT11AY.980.000079
ORF1ab/nsp312V12VgtGgtT11B0.000128
ORF1ab/nsp312V12VgtGgtT11B.1.1.1410.002012
ORF1ab/nsp312V12VgtGgtT11B.1.1.2040.00304
ORF1ab/nsp312V12VgtGgtT11B.1.1.2790.001121
ORF1ab/nsp312V12VgtGgtT11B.1.1.2820.011628
ORF1ab/nsp312V12VgtGgtT11B.1.1.2970.002237
ORF1ab/nsp312V12VgtGgtT11B.1.1.2980.000862
ORF1ab/nsp312V12VgtGgtT11B.1.1.3060.000438
ORF1ab/nsp312V12VgtGgtT11B.1.1.3260.001761
ORF1ab/nsp312V12VgtGgtT11B.1.1.3290.003846
ORF1ab/nsp312V12VgtGgtT11B.1.1.330.000421
ORF1ab/nsp312V12VgtGgtT11B.1.1.4340.000349
ORF1ab/nsp312V12VgtGgtT11B.1.1.520.012195
ORF1ab/nsp312V12VgtGgtT11B.1.1.560.017857
ORF1ab/nsp312V12VgtGgtA11B.1.160.140.002119
ORF1ab/nsp312V12VgtGgtA11B.1.160.330.004425
ORF1ab/nsp312V12VgtGgtT11B.1.177.120.000152
ORF1ab/nsp312V12VgtGgtT11B.1.177.180.00116
ORF1ab/nsp312V12VgtGgtT11B.1.177.200.001517
ORF1ab/nsp312V12VgtGgtT11B.1.177.440.000519
ORF1ab/nsp312V12VgtGgtT11B.1.177.50.001242
ORF1ab/nsp312V12VgtGgtT11B.1.177.520.001757
ORF1ab/nsp312V12VgtGgtA11B.1.2210.000071
ORF1ab/nsp312V12VgtGgtT11B.1.258.170.000104
ORF1ab/nsp312V12VgtGgtT11B.1.3010.005917
ORF1ab/nsp312V12VgtGgtC11B.1.3380.008621
ORF1ab/nsp312V12VgtGgtA11B.1.360.000146
ORF1ab/nsp312V12VgtGgtT11B.1.36.270.000763
ORF1ab/nsp312V12VgtGgtT11B.1.36.310.001751
ORF1ab/nsp312V12VgtGgtT11B.1.3720.010989
ORF1ab/nsp312V12VgtGgtT11B.1.3960.000706
ORF1ab/nsp312V12VgtGgtT11B.1.4000.000429
ORF1ab/nsp312V12VgtGgtT11B.1.4150.014286
ORF1ab/nsp312V12VgtGgtT11B.1.4250.002994
ORF1ab/nsp312V12VgtGgtT11B.1.4270.00005
ORF1ab/nsp312V12VgtGgtT11B.1.4350.011364
ORF1ab/nsp312V12VgtGgtT11B.1.438.10.000107
ORF1ab/nsp312V12VgtGgtT11B.1.4590.004082
ORF1ab/nsp312V12VgtGgtT11B.1.5600.00463
ORF1ab/nsp312V12VgtGgtA11B.1.5800.004065
ORF1ab/nsp312V12VgtGgtT11B.1.5950.000261
ORF1ab/nsp312V12VgtGgtA11B.1.5960.000087
ORF1ab/nsp312V12VgtGgtT11B.1.6210.000089
ORF1ab/nsp312V12VgtGgtT11B.1.6250.002353
ORF1ab/nsp312V12VgtGgtT11B.1.6370.000073
ORF1ab/nsp312V12VgtGgtT11C.37.10.002618
ORF1ab/nsp312V12VgtGgtT11D.30.005917
ORF1ab/nsp312V12VgtGgtT11N.70.029412
ORF1ab/nsp312V12VgtGgtT11P.1.10.000318
ORF1ab/nsp312V12VgtGgtT11P.1.160.000374
ORF1ab/nsp312V12VgtGgtT11P.1.170.000162
ORF1ab/nsp312V12VgtGgtT11P.1.20.001156
ORF1ab/nsp312V12VgtGgtT11P.60.003145
ORF1ab/nsp312V12VgtGgtT11Q.10.000126