CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = V1298A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31298V1298AV2116AnonsyngTagCa104010360.9961546611-6613
ORF1ab/nsp31298V1298AV2116AnonsyngTAgCG104040.003846156611-6613

Details of the mutation V1298A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31298V1298AgTagCa10361040All0.000198
ORF1ab/nsp31298V1298AgTAgCG41040All0.000001
ORF1ab/nsp31298V1298AgTagCa866866B.1.4360.890947
ORF1ab/nsp31298V1298AgTagCa5757B.1.1.70.000051
ORF1ab/nsp31298V1298AgTagCa2828B.10.000256
ORF1ab/nsp31298V1298AgTagCa2323B.1.5960.002004
ORF1ab/nsp31298V1298AgTagCa77B.1.20.000062
ORF1ab/nsp31298V1298AgTagCa66AY.440.000037
ORF1ab/nsp31298V1298AgTagCa55B.1.1110.005875
ORF1ab/nsp31298V1298AgTagCa44AY.40.000006
ORF1ab/nsp31298V1298AgTagCa33B.1.1.4640.004418
ORF1ab/nsp31298V1298AgTagCa33B.1.617.20.000011
ORF1ab/nsp31298V1298AgTAgCG33P.10.000047
ORF1ab/nsp31298V1298AgTagCa22AY.390.000049
ORF1ab/nsp31298V1298AgTagCa22AY.430.000009
ORF1ab/nsp31298V1298AgTagCa22AY.470.000062
ORF1ab/nsp31298V1298AgTagCa22AY.98.10.000097
ORF1ab/nsp31298V1298AgTagCa22B.1.10.000036
ORF1ab/nsp31298V1298AgTagCa22B.1.5800.00813
ORF1ab/nsp31298V1298AgTagCa11AY.1020.000027
ORF1ab/nsp31298V1298AgTagCa11AY.1030.000006
ORF1ab/nsp31298V1298AgTagCa11AY.1180.000063
ORF1ab/nsp31298V1298AgTagCa11AY.130.000161
ORF1ab/nsp31298V1298AgTagCa11AY.200.000039
ORF1ab/nsp31298V1298AgTagCa11AY.230.00007
ORF1ab/nsp31298V1298AgTagCa11AY.250.000006
ORF1ab/nsp31298V1298AgTagCa11AY.260.000028
ORF1ab/nsp31298V1298AgTagCa11AY.30.00001
ORF1ab/nsp31298V1298AgTagCa11AY.46.40.000165
ORF1ab/nsp31298V1298AgTagCa11AY.540.000095
ORF1ab/nsp31298V1298AgTagCa11AY.70.000196
ORF1ab/nsp31298V1298AgTagCa11AY.75.10.00018
ORF1ab/nsp31298V1298AgTagCa11B.1.1.3060.000438
ORF1ab/nsp31298V1298AgTagCa11B.1.2430.00007
ORF1ab/nsp31298V1298AgTagCa11B.1.360.000146
ORF1ab/nsp31298V1298AgTagCa11B.1.4290.000024
ORF1ab/nsp31298V1298AgTagCa11B.1.4590.004082
ORF1ab/nsp31298V1298AgTagCa11B.1.5330.009615
ORF1ab/nsp31298V1298AgTagCa11B.1.5950.000261
ORF1ab/nsp31298V1298AgTagCa11B.1.6340.003425
ORF1ab/nsp31298V1298AgTagCa11B.4.10.018868
ORF1ab/nsp31298V1298AgTAgCG11P.1.170.000162