CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = V1253F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31253V1253FV2071FnonsynGttTtt2539253916476-6478

Details of the mutation V1253F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31253V1253FGttTtt25392539All0.000486
ORF1ab/nsp31253V1253FGttTtt11231123P.10.017692
ORF1ab/nsp31253V1253FGttTtt364364B.1.1.70.000326
ORF1ab/nsp31253V1253FGttTtt106106B.1.20.000933
ORF1ab/nsp31253V1253FGttTtt9696AY.40.000149
ORF1ab/nsp31253V1253FGttTtt9191AY.260.002576
ORF1ab/nsp31253V1253FGttTtt6363B.1.617.20.000237
ORF1ab/nsp31253V1253FGttTtt5050B.1.177.210.003824
ORF1ab/nsp31253V1253FGttTtt3434AY.430.000151
ORF1ab/nsp31253V1253FGttTtt3333P.1.120.015973
ORF1ab/nsp31253V1253FGttTtt3232AY.1030.000199
ORF1ab/nsp31253V1253FGttTtt3030B.10.000275
ORF1ab/nsp31253V1253FGttTtt2929AY.250.000174
ORF1ab/nsp31253V1253FGttTtt2828AY.1020.000742
ORF1ab/nsp31253V1253FGttTtt2727AY.980.002133
ORF1ab/nsp31253V1253FGttTtt2626B.1.1.3720.017906
ORF1ab/nsp31253V1253FGttTtt2525AY.440.000152
ORF1ab/nsp31253V1253FGttTtt2424B.1.10.000435
ORF1ab/nsp31253V1253FGttTtt2222A.10.006201
ORF1ab/nsp31253V1253FGttTtt2020AY.70.00392
ORF1ab/nsp31253V1253FGttTtt1818B.1.1.3060.007891
ORF1ab/nsp31253V1253FGttTtt1515AY.30.000149
ORF1ab/nsp31253V1253FGttTtt1515B.1.177.40.003166
ORF1ab/nsp31253V1253FGttTtt1414B.1.1600.000437
ORF1ab/nsp31253V1253FGttTtt1111B.1.3510.000327
ORF1ab/nsp31253V1253FGttTtt1010AY.7.10.001127
ORF1ab/nsp31253V1253FGttTtt1010AY.99.20.000922
ORF1ab/nsp31253V1253FGttTtt99B.1.1.5190.000357
ORF1ab/nsp31253V1253FGttTtt88B.1.1.4810.571429
ORF1ab/nsp31253V1253FGttTtt77AY.330.000467
ORF1ab/nsp31253V1253FGttTtt77AY.390.000173
ORF1ab/nsp31253V1253FGttTtt77AY.530.002013
ORF1ab/nsp31253V1253FGttTtt77B.1.5250.000792
ORF1ab/nsp31253V1253FGttTtt66AY.290.000095
ORF1ab/nsp31253V1253FGttTtt66B.1.2430.000418
ORF1ab/nsp31253V1253FGttTtt55AY.1190.000177
ORF1ab/nsp31253V1253FGttTtt55AY.20.001781
ORF1ab/nsp31253V1253FGttTtt55B.1.177.100.00439
ORF1ab/nsp31253V1253FGttTtt55B.1.2580.000333
ORF1ab/nsp31253V1253FGttTtt55P.1.150.001162
ORF1ab/nsp31253V1253FGttTtt44AY.9.20.000147
ORF1ab/nsp31253V1253FGttTtt44B.1.1.2160.003562
ORF1ab/nsp31253V1253FGttTtt44B.1.1.3170.001647
ORF1ab/nsp31253V1253FGttTtt44B.1.360.000584
ORF1ab/nsp31253V1253FGttTtt44B.1.617.10.000516
ORF1ab/nsp31253V1253FGttTtt33AY.1170.000254
ORF1ab/nsp31253V1253FGttTtt33AY.120.000948
ORF1ab/nsp31253V1253FGttTtt33AY.200.000117
ORF1ab/nsp31253V1253FGttTtt33AY.4.20.000065
ORF1ab/nsp31253V1253FGttTtt33AY.590.001589
ORF1ab/nsp31253V1253FGttTtt33B.1.1770.00004
ORF1ab/nsp31253V1253FGttTtt33B.1.2180.015464
ORF1ab/nsp31253V1253FGttTtt33B.1.258.170.000312
ORF1ab/nsp31253V1253FGttTtt33B.1.4290.000071
ORF1ab/nsp31253V1253FGttTtt33B.1.5260.000071
ORF1ab/nsp31253V1253FGttTtt33B.1.5480.107143
ORF1ab/nsp31253V1253FGttTtt33B.1.5950.000783
ORF1ab/nsp31253V1253FGttTtt33P.1.140.000143
ORF1ab/nsp31253V1253FGttTtt22AY.1200.000074
ORF1ab/nsp31253V1253FGttTtt22AY.4.50.000215
ORF1ab/nsp31253V1253FGttTtt22AY.420.00008
ORF1ab/nsp31253V1253FGttTtt22AY.450.000243
ORF1ab/nsp31253V1253FGttTtt22AY.46.50.000397
ORF1ab/nsp31253V1253FGttTtt22AY.5.40.000553
ORF1ab/nsp31253V1253FGttTtt22AY.550.001835
ORF1ab/nsp31253V1253FGttTtt22AY.610.00021
ORF1ab/nsp31253V1253FGttTtt22AY.850.000854
ORF1ab/nsp31253V1253FGttTtt22AY.98.10.000097
ORF1ab/nsp31253V1253FGttTtt22B.1.1.3120.003824
ORF1ab/nsp31253V1253FGttTtt22B.1.22.10.0625
ORF1ab/nsp31253V1253FGttTtt22B.1.3690.00057
ORF1ab/nsp31253V1253FGttTtt22B.1.5770.001375
ORF1ab/nsp31253V1253FGttTtt22C.360.001821
ORF1ab/nsp31253V1253FGttTtt22N.50.003534
ORF1ab/nsp31253V1253FGttTtt22P.1.10.000635
ORF1ab/nsp31253V1253FGttTtt22P.1.100.000539
ORF1ab/nsp31253V1253FGttTtt22P.1.170.000324
ORF1ab/nsp31253V1253FGttTtt11A.2.50.000499
ORF1ab/nsp31253V1253FGttTtt11A.2.5.20.001572
ORF1ab/nsp31253V1253FGttTtt11A.270.001656
ORF1ab/nsp31253V1253FGttTtt11AY.1000.000046
ORF1ab/nsp31253V1253FGttTtt11AY.110.001339
ORF1ab/nsp31253V1253FGttTtt11AY.1110.000183
ORF1ab/nsp31253V1253FGttTtt11AY.1130.000142
ORF1ab/nsp31253V1253FGttTtt11AY.1160.000287
ORF1ab/nsp31253V1253FGttTtt11AY.1180.000063
ORF1ab/nsp31253V1253FGttTtt11AY.1210.000135
ORF1ab/nsp31253V1253FGttTtt11AY.160.00038
ORF1ab/nsp31253V1253FGttTtt11AY.230.00007
ORF1ab/nsp31253V1253FGttTtt11AY.270.000065
ORF1ab/nsp31253V1253FGttTtt11AY.3.10.000085
ORF1ab/nsp31253V1253FGttTtt11AY.360.000148
ORF1ab/nsp31253V1253FGttTtt11AY.39.10.00004
ORF1ab/nsp31253V1253FGttTtt11AY.4.2.10.000149
ORF1ab/nsp31253V1253FGttTtt11AY.4.40.000409
ORF1ab/nsp31253V1253FGttTtt11AY.470.000031
ORF1ab/nsp31253V1253FGttTtt11AY.5.20.002463
ORF1ab/nsp31253V1253FGttTtt11AY.730.000665
ORF1ab/nsp31253V1253FGttTtt11B.1.1.1980.001468
ORF1ab/nsp31253V1253FGttTtt11B.1.1.250.000569
ORF1ab/nsp31253V1253FGttTtt11B.1.1.3670.055556
ORF1ab/nsp31253V1253FGttTtt11B.1.1.510.001718
ORF1ab/nsp31253V1253FGttTtt11B.1.1.5230.001563
ORF1ab/nsp31253V1253FGttTtt11B.1.1180.006711
ORF1ab/nsp31253V1253FGttTtt11B.1.177.160.000664
ORF1ab/nsp31253V1253FGttTtt11B.1.177.200.001517
ORF1ab/nsp31253V1253FGttTtt11B.1.177.80.000752
ORF1ab/nsp31253V1253FGttTtt11B.1.2210.000071
ORF1ab/nsp31253V1253FGttTtt11B.1.2400.000216
ORF1ab/nsp31253V1253FGttTtt11B.1.3110.000275
ORF1ab/nsp31253V1253FGttTtt11B.1.36.290.000517
ORF1ab/nsp31253V1253FGttTtt11B.1.36.310.001751
ORF1ab/nsp31253V1253FGttTtt11B.1.4280.00102
ORF1ab/nsp31253V1253FGttTtt11B.1.438.10.000107
ORF1ab/nsp31253V1253FGttTtt11B.1.4990.00105
ORF1ab/nsp31253V1253FGttTtt11B.1.5990.00365
ORF1ab/nsp31253V1253FGttTtt11B.1.6210.000089
ORF1ab/nsp31253V1253FGttTtt11B.1.6280.000352
ORF1ab/nsp31253V1253FGttTtt11B.1.930.000934
ORF1ab/nsp31253V1253FGttTtt11C.370.000116
ORF1ab/nsp31253V1253FGttTtt11P.1.10.10.00813