CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = V1229F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31229V1229FV2047FnonsynGtcTtc5511551116404-6406

Details of the mutation V1229F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31229V1229FGtcTtc55115511All0.001054
ORF1ab/nsp31229V1229FGtcTtc16911691AY.40.002632
ORF1ab/nsp31229V1229FGtcTtc713713B.1.10.012934
ORF1ab/nsp31229V1229FGtcTtc477477B.1.617.20.001796
ORF1ab/nsp31229V1229FGtcTtc311311B.1.1.70.000278
ORF1ab/nsp31229V1229FGtcTtc272272B.1.2410.220779
ORF1ab/nsp31229V1229FGtcTtc239239AY.430.001059
ORF1ab/nsp31229V1229FGtcTtc188188B.1.1890.806867
ORF1ab/nsp31229V1229FGtcTtc155155AY.30.001542
ORF1ab/nsp31229V1229FGtcTtc118118AY.440.000718
ORF1ab/nsp31229V1229FGtcTtc8686AY.1030.000534
ORF1ab/nsp31229V1229FGtcTtc8282B.10.000751
ORF1ab/nsp31229V1229FGtcTtc8181B.1.20.000713
ORF1ab/nsp31229V1229FGtcTtc6969B.1.1770.000909
ORF1ab/nsp31229V1229FGtcTtc6666B.1.3360.160976
ORF1ab/nsp31229V1229FGtcTtc5454AY.390.001334
ORF1ab/nsp31229V1229FGtcTtc4545B.1.4060.272727
ORF1ab/nsp31229V1229FGtcTtc4444P.10.000693
ORF1ab/nsp31229V1229FGtcTtc3737B.1.1.5190.001469
ORF1ab/nsp31229V1229FGtcTtc3333AY.250.000198
ORF1ab/nsp31229V1229FGtcTtc2929AY.750.001625
ORF1ab/nsp31229V1229FGtcTtc2727B.1.5260.000635
ORF1ab/nsp31229V1229FGtcTtc2424AY.1200.000892
ORF1ab/nsp31229V1229FGtcTtc2121AY.1020.000557
ORF1ab/nsp31229V1229FGtcTtc2020B.1.1.10.006534
ORF1ab/nsp31229V1229FGtcTtc1919B.1.6090.009108
ORF1ab/nsp31229V1229FGtcTtc1818AY.980.001422
ORF1ab/nsp31229V1229FGtcTtc1717B.1.1.3190.298246
ORF1ab/nsp31229V1229FGtcTtc1717P.1.100.004581
ORF1ab/nsp31229V1229FGtcTtc1616AY.840.006999
ORF1ab/nsp31229V1229FGtcTtc1616AY.90.001082
ORF1ab/nsp31229V1229FGtcTtc1515AY.260.000425
ORF1ab/nsp31229V1229FGtcTtc1414B.1.1.2140.000776
ORF1ab/nsp31229V1229FGtcTtc1414B.1.2580.000932
ORF1ab/nsp31229V1229FGtcTtc1414P.1.140.000669
ORF1ab/nsp31229V1229FGtcTtc1313AY.50.000268
ORF1ab/nsp31229V1229FGtcTtc1313B.1.4270.000656
ORF1ab/nsp31229V1229FGtcTtc1212B.1.1.2910.008909
ORF1ab/nsp31229V1229FGtcTtc1212B.1.2430.000835
ORF1ab/nsp31229V1229FGtcTtc1212P.1.150.002788
ORF1ab/nsp31229V1229FGtcTtc1111AY.200.000428
ORF1ab/nsp31229V1229FGtcTtc1111D.20.000825
ORF1ab/nsp31229V1229FGtcTtc1010AY.1190.000353
ORF1ab/nsp31229V1229FGtcTtc99AY.910.006574
ORF1ab/nsp31229V1229FGtcTtc99B.1.1.1760.003954
ORF1ab/nsp31229V1229FGtcTtc99B.1.1.2220.001836
ORF1ab/nsp31229V1229FGtcTtc99B.1.1.2690.012179
ORF1ab/nsp31229V1229FGtcTtc99B.1.5250.001018
ORF1ab/nsp31229V1229FGtcTtc88AY.140.000704
ORF1ab/nsp31229V1229FGtcTtc88AY.230.000558
ORF1ab/nsp31229V1229FGtcTtc88AY.330.000534
ORF1ab/nsp31229V1229FGtcTtc88AY.4.50.00086
ORF1ab/nsp31229V1229FGtcTtc88AY.460.000833
ORF1ab/nsp31229V1229FGtcTtc88B.1.1600.00025
ORF1ab/nsp31229V1229FGtcTtc77AY.1000.000322
ORF1ab/nsp31229V1229FGtcTtc77AY.60.000288
ORF1ab/nsp31229V1229FGtcTtc77B.1.1.700.002387
ORF1ab/nsp31229V1229FGtcTtc77B.1.3510.000208
ORF1ab/nsp31229V1229FGtcTtc77B.1.360.001021
ORF1ab/nsp31229V1229FGtcTtc77B.1.4290.000165
ORF1ab/nsp31229V1229FGtcTtc77B.1.617.10.000903
ORF1ab/nsp31229V1229FGtcTtc66B.1.177.600.001311
ORF1ab/nsp31229V1229FGtcTtc66B.1.2210.000426
ORF1ab/nsp31229V1229FGtcTtc55A.2.50.002495
ORF1ab/nsp31229V1229FGtcTtc55AY.1170.000423
ORF1ab/nsp31229V1229FGtcTtc55AY.290.000079
ORF1ab/nsp31229V1229FGtcTtc55AY.4.20.000108
ORF1ab/nsp31229V1229FGtcTtc55AY.450.000608
ORF1ab/nsp31229V1229FGtcTtc55B.1.1.1940.024752
ORF1ab/nsp31229V1229FGtcTtc55P.20.000933
ORF1ab/nsp31229V1229FGtcTtc55Q.30.000725
ORF1ab/nsp31229V1229FGtcTtc44A.2.5.30.041237
ORF1ab/nsp31229V1229FGtcTtc44AY.300.001583
ORF1ab/nsp31229V1229FGtcTtc44AY.480.00186
ORF1ab/nsp31229V1229FGtcTtc44AY.530.00115
ORF1ab/nsp31229V1229FGtcTtc44B.1.1.4090.011331
ORF1ab/nsp31229V1229FGtcTtc44B.1.2400.000862
ORF1ab/nsp31229V1229FGtcTtc44B.1.438.10.000429
ORF1ab/nsp31229V1229FGtcTtc33AY.360.000445
ORF1ab/nsp31229V1229FGtcTtc33AY.420.000121
ORF1ab/nsp31229V1229FGtcTtc33AY.640.001786
ORF1ab/nsp31229V1229FGtcTtc33AY.9.20.00011
ORF1ab/nsp31229V1229FGtcTtc33AY.99.20.000276
ORF1ab/nsp31229V1229FGtcTtc33B.1.1.1420.052632
ORF1ab/nsp31229V1229FGtcTtc33B.1.1.2770.002276
ORF1ab/nsp31229V1229FGtcTtc33B.1.1.4160.002715
ORF1ab/nsp31229V1229FGtcTtc33B.1.2060.002447
ORF1ab/nsp31229V1229FGtcTtc33B.1.5960.000261
ORF1ab/nsp31229V1229FGtcTtc33P.1.40.00293
ORF1ab/nsp31229V1229FGtcTtc22AY.1130.000285
ORF1ab/nsp31229V1229FGtcTtc22AY.1140.000462
ORF1ab/nsp31229V1229FGtcTtc22AY.160.000759
ORF1ab/nsp31229V1229FGtcTtc22AY.320.001065
ORF1ab/nsp31229V1229FGtcTtc22AY.39.10.000079
ORF1ab/nsp31229V1229FGtcTtc22AY.610.00021
ORF1ab/nsp31229V1229FGtcTtc22AY.700.000417
ORF1ab/nsp31229V1229FGtcTtc22AY.710.00095
ORF1ab/nsp31229V1229FGtcTtc22AY.880.001768
ORF1ab/nsp31229V1229FGtcTtc22B0.000256
ORF1ab/nsp31229V1229FGtcTtc22B.1.1.1980.002937
ORF1ab/nsp31229V1229FGtcTtc22B.1.1.2840.000215
ORF1ab/nsp31229V1229FGtcTtc22B.1.1.2980.001724
ORF1ab/nsp31229V1229FGtcTtc22B.1.1.3180.000604
ORF1ab/nsp31229V1229FGtcTtc22B.1.1.3850.008929
ORF1ab/nsp31229V1229FGtcTtc22B.1.1.4190.014815
ORF1ab/nsp31229V1229FGtcTtc22B.1.1.4300.083333
ORF1ab/nsp31229V1229FGtcTtc22B.1.4000.000858
ORF1ab/nsp31229V1229FGtcTtc22B.1.4440.031746
ORF1ab/nsp31229V1229FGtcTtc22B.1.5490.014388
ORF1ab/nsp31229V1229FGtcTtc22B.1.5580.009132
ORF1ab/nsp31229V1229FGtcTtc22B.1.5650.001621
ORF1ab/nsp31229V1229FGtcTtc22B.1.5750.000607
ORF1ab/nsp31229V1229FGtcTtc22B.1.6340.006849
ORF1ab/nsp31229V1229FGtcTtc22B.1.6370.000146
ORF1ab/nsp31229V1229FGtcTtc22C.160.002121
ORF1ab/nsp31229V1229FGtcTtc22N.50.003534
ORF1ab/nsp31229V1229FGtcTtc22P.1.120.000968
ORF1ab/nsp31229V1229FGtcTtc22P.1.20.002312
ORF1ab/nsp31229V1229FGtcTtc11AY.1050.000643
ORF1ab/nsp31229V1229FGtcTtc11AY.1160.000287
ORF1ab/nsp31229V1229FGtcTtc11AY.116.10.000311
ORF1ab/nsp31229V1229FGtcTtc11AY.120.000316
ORF1ab/nsp31229V1229FGtcTtc11AY.130.000161
ORF1ab/nsp31229V1229FGtcTtc11AY.210.001898
ORF1ab/nsp31229V1229FGtcTtc11AY.34.10.00051
ORF1ab/nsp31229V1229FGtcTtc11AY.380.000499
ORF1ab/nsp31229V1229FGtcTtc11AY.410.000294
ORF1ab/nsp31229V1229FGtcTtc11AY.46.40.000165
ORF1ab/nsp31229V1229FGtcTtc11AY.470.000031
ORF1ab/nsp31229V1229FGtcTtc11AY.550.000917
ORF1ab/nsp31229V1229FGtcTtc11AY.600.000938
ORF1ab/nsp31229V1229FGtcTtc11AY.650.000533
ORF1ab/nsp31229V1229FGtcTtc11AY.670.000464
ORF1ab/nsp31229V1229FGtcTtc11AY.7.20.000559
ORF1ab/nsp31229V1229FGtcTtc11AY.740.000116
ORF1ab/nsp31229V1229FGtcTtc11AY.9.10.000084
ORF1ab/nsp31229V1229FGtcTtc11AY.930.000273
ORF1ab/nsp31229V1229FGtcTtc11AY.98.10.000048
ORF1ab/nsp31229V1229FGtcTtc11AZ.20.000821
ORF1ab/nsp31229V1229FGtcTtc11B.1.1.1220.045455
ORF1ab/nsp31229V1229FGtcTtc11B.1.1.1370.0125
ORF1ab/nsp31229V1229FGtcTtc11B.1.1.1450.037037
ORF1ab/nsp31229V1229FGtcTtc11B.1.1.1710.003676
ORF1ab/nsp31229V1229FGtcTtc11B.1.1.2540.011236
ORF1ab/nsp31229V1229FGtcTtc11B.1.1.2990.012195
ORF1ab/nsp31229V1229FGtcTtc11B.1.1.330.000421
ORF1ab/nsp31229V1229FGtcTtc11B.1.1.3690.000446
ORF1ab/nsp31229V1229FGtcTtc11B.1.1.370.000193
ORF1ab/nsp31229V1229FGtcTtc11B.1.1.3880.045455
ORF1ab/nsp31229V1229FGtcTtc11B.1.1.3970.002252
ORF1ab/nsp31229V1229FGtcTtc11B.1.1.3980.003226
ORF1ab/nsp31229V1229FGtcTtc11B.1.1.4070.041667
ORF1ab/nsp31229V1229FGtcTtc11B.1.1.630.000386
ORF1ab/nsp31229V1229FGtcTtc11B.1.1.890.006061
ORF1ab/nsp31229V1229FGtcTtc11B.1.1110.001175
ORF1ab/nsp31229V1229FGtcTtc11B.1.177.240.001295
ORF1ab/nsp31229V1229FGtcTtc11B.1.177.40.000211
ORF1ab/nsp31229V1229FGtcTtc11B.1.214.20.0006
ORF1ab/nsp31229V1229FGtcTtc11B.1.2340.000132
ORF1ab/nsp31229V1229FGtcTtc11B.1.258.140.00098
ORF1ab/nsp31229V1229FGtcTtc11B.1.258.170.000104
ORF1ab/nsp31229V1229FGtcTtc11B.1.3490.000715
ORF1ab/nsp31229V1229FGtcTtc11B.1.350.008475
ORF1ab/nsp31229V1229FGtcTtc11B.1.36.270.000763
ORF1ab/nsp31229V1229FGtcTtc11B.1.3670.000792
ORF1ab/nsp31229V1229FGtcTtc11B.1.4360.001029
ORF1ab/nsp31229V1229FGtcTtc11B.1.4680.005714
ORF1ab/nsp31229V1229FGtcTtc11B.1.4700.001404
ORF1ab/nsp31229V1229FGtcTtc11B.1.5640.000426
ORF1ab/nsp31229V1229FGtcTtc11B.1.5820.000491
ORF1ab/nsp31229V1229FGtcTtc11B.1.6200.000946
ORF1ab/nsp31229V1229FGtcTtc11B.1.6210.000089
ORF1ab/nsp31229V1229FGtcTtc11B.1.690.035714
ORF1ab/nsp31229V1229FGtcTtc11B.1.9.50.005682
ORF1ab/nsp31229V1229FGtcTtc11B.400.000364
ORF1ab/nsp31229V1229FGtcTtc11B.450.003831
ORF1ab/nsp31229V1229FGtcTtc11C.360.000911
ORF1ab/nsp31229V1229FGtcTtc11C.370.000116
ORF1ab/nsp31229V1229FGtcTtc11Q.70.001111
ORF1ab/nsp31229V1229FGtcTtc11Q.80.000165