CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T970del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3970T970del1T1788del1delaCga-g17120.7058825627-5629
ORF1ab/nsp3970T970del1T1788del1delacGac-1750.2941185627-5629

Details of the mutation T970del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3970T970del1aCga-g1217All0.000002
ORF1ab/nsp3970T970del1acGac-517All0.000001
ORF1ab/nsp3970T970del1aCga-g1111B.1.1.3060.004822
ORF1ab/nsp3970T970del1acGac-11AY.1030.000006
ORF1ab/nsp3970T970del1acGac-11AY.1190.000035
ORF1ab/nsp3970T970del1acGac-11AY.390.000025
ORF1ab/nsp3970T970del1aCga-g11B.1.10.000018
ORF1ab/nsp3970T970del1acGac-11B.1.617.20.000004
ORF1ab/nsp3970T970del1acGac-11B.340.013699