CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T970T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3970T970TT1788TsynacGacT43273426920.9865745627-5629
ORF1ab/nsp3970T970TT1788TsynacGacA432735520.01275625627-5629
ORF1ab/nsp3970T970TT1788TsynacGacC43273290.0006701645627-5629

Details of the mutation T970T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3970T970TacGacT4269243273All0.008165
ORF1ab/nsp3970T970TacGacA55243273All0.000106
ORF1ab/nsp3970T970TacGacC2943273All0.000006
ORF1ab/nsp3970T970TacGacT3016130161B.1.1600.94065
ORF1ab/nsp3970T970TacGacT19271928AY.60.079255
ORF1ab/nsp3970T970TacGacA11928AY.60.000041
ORF1ab/nsp3970T970TacGacT893893B.1.160.160.829926
ORF1ab/nsp3970T970TacGacT768768B.1.160.80.989691
ORF1ab/nsp3970T970TacGacT672724B.1.10.012191
ORF1ab/nsp3970T970TacGacA52724B.1.10.000943
ORF1ab/nsp3970T970TacGacT585585B.1.160.170.994898
ORF1ab/nsp3970T970TacGacT481481B.1.160.71
ORF1ab/nsp3970T970TacGacT471475B.10.004314
ORF1ab/nsp3970T970TacGacA4475B.10.000037
ORF1ab/nsp3970T970TacGacT407407B.1.160.140.862288
ORF1ab/nsp3970T970TacGacT334380B.1.1.70.000299
ORF1ab/nsp3970T970TacGacA46380B.1.1.70.000041
ORF1ab/nsp3970T970TacGacT365365B.1.160.260.883777
ORF1ab/nsp3970T970TacGacT326326B.1.160.280.953216
ORF1ab/nsp3970T970TacGacT292292AY.570.191601
ORF1ab/nsp3970T970TacGacT204245AY.40.000318
ORF1ab/nsp3970T970TacGacA34245AY.40.000053
ORF1ab/nsp3970T970TacGacC7245AY.40.000011
ORF1ab/nsp3970T970TacGacT218234B.1.617.20.000821
ORF1ab/nsp3970T970TacGacA16234B.1.617.20.00006
ORF1ab/nsp3970T970TacGacT225225B.1.160.240.995575
ORF1ab/nsp3970T970TacGacT225225B.1.160.330.995575
ORF1ab/nsp3970T970TacGacT207207B.1.160.231
ORF1ab/nsp3970T970TacGacA178203AY.46.60.012853
ORF1ab/nsp3970T970TacGacT24203AY.46.60.001733
ORF1ab/nsp3970T970TacGacC1203AY.46.60.000072
ORF1ab/nsp3970T970TacGacT203203B.1.160.290.85654
ORF1ab/nsp3970T970TacGacT181181AY.330.012087
ORF1ab/nsp3970T970TacGacT179179B.1.160.300.532738
ORF1ab/nsp3970T970TacGacT171171B.1.160.320.733906
ORF1ab/nsp3970T970TacGacT168168B.1.160.150.831683
ORF1ab/nsp3970T970TacGacT141141B.1.160.110.805714
ORF1ab/nsp3970T970TacGacT139139B.1.160.120.891026
ORF1ab/nsp3970T970TacGacT137137B.1.160.181
ORF1ab/nsp3970T970TacGacT130130B.1.160.220.878378
ORF1ab/nsp3970T970TacGacT127127B.1.160.90.913669
ORF1ab/nsp3970T970TacGacT122122AB.11
ORF1ab/nsp3970T970TacGacT109120AY.440.000663
ORF1ab/nsp3970T970TacGacA9120AY.440.000055
ORF1ab/nsp3970T970TacGacC2120AY.440.000012
ORF1ab/nsp3970T970TacGacT109109B.1.160.100.879032
ORF1ab/nsp3970T970TacGacT106106B.1.160.310.854839
ORF1ab/nsp3970T970TacGacT92105P.10.001449
ORF1ab/nsp3970T970TacGacA13105P.10.000205
ORF1ab/nsp3970T970TacGacT9494R.10.008461
ORF1ab/nsp3970T970TacGacT6790AY.1020.001776
ORF1ab/nsp3970T970TacGacA2390AY.1020.00061
ORF1ab/nsp3970T970TacGacT7990AY.430.00035
ORF1ab/nsp3970T970TacGacA1190AY.430.000049
ORF1ab/nsp3970T970TacGacT9090B.1.160.251
ORF1ab/nsp3970T970TacGacT7275B.1.1770.000948
ORF1ab/nsp3970T970TacGacA275B.1.1770.000026
ORF1ab/nsp3970T970TacGacC175B.1.1770.000013
ORF1ab/nsp3970T970TacGacA3774AY.390.000914
ORF1ab/nsp3970T970TacGacT3774AY.390.000914
ORF1ab/nsp3970T970TacGacT7272B.1.2210.005114
ORF1ab/nsp3970T970TacGacT6868B.1.160.200.607143
ORF1ab/nsp3970T970TacGacT6666B.1.160.271
ORF1ab/nsp3970T970TacGacT6061AY.250.000361
ORF1ab/nsp3970T970TacGacA161AY.250.000006
ORF1ab/nsp3970T970TacGacT3947B.1.20.000343
ORF1ab/nsp3970T970TacGacA747B.1.20.000062
ORF1ab/nsp3970T970TacGacC147B.1.20.000009
ORF1ab/nsp3970T970TacGacT4545C.360.040984
ORF1ab/nsp3970T970TacGacT4344AY.1030.000267
ORF1ab/nsp3970T970TacGacA144AY.1030.000006
ORF1ab/nsp3970T970TacGacT4141B.1.160.210.836735
ORF1ab/nsp3970T970TacGacT3939AY.1080.042999
ORF1ab/nsp3970T970TacGacT3636B.1.160.131
ORF1ab/nsp3970T970TacGacA3335D.20.002476
ORF1ab/nsp3970T970TacGacT235D.20.00015
ORF1ab/nsp3970T970TacGacT3434B.1.177.310.390805
ORF1ab/nsp3970T970TacGacT3232B.1.177.440.016606
ORF1ab/nsp3970T970TacGacT2629B.1.5260.000611
ORF1ab/nsp3970T970TacGacA329B.1.5260.000071
ORF1ab/nsp3970T970TacGacT2424B.1.160.190.857143
ORF1ab/nsp3970T970TacGacT1823B.1.2430.001253
ORF1ab/nsp3970T970TacGacA523B.1.2430.000348
ORF1ab/nsp3970T970TacGacT2222B.1.1.4450.814815
ORF1ab/nsp3970T970TacGacT2222B.1.5300.157143
ORF1ab/nsp3970T970TacGacT2020AY.30.000199
ORF1ab/nsp3970T970TacGacT2020B.1.3950.140845
ORF1ab/nsp3970T970TacGacT1818AY.1130.002563
ORF1ab/nsp3970T970TacGacT1818B.1.1.390.009174
ORF1ab/nsp3970T970TacGacT1818B.1.258.110.007134
ORF1ab/nsp3970T970TacGacT1717B.1.2400.003665
ORF1ab/nsp3970T970TacGacT1516B.1.4270.000757
ORF1ab/nsp3970T970TacGacA116B.1.4270.00005
ORF1ab/nsp3970T970TacGacT1515B.1.4290.000353
ORF1ab/nsp3970T970TacGacT1014AY.200.000389
ORF1ab/nsp3970T970TacGacA414AY.200.000155
ORF1ab/nsp3970T970TacGacC1414B.1.177.510.063927
ORF1ab/nsp3970T970TacGacT1313B.1.177.450.004956
ORF1ab/nsp3970T970TacGacT1313B.1.6280.004581
ORF1ab/nsp3970T970TacGacT1212B.1.1420.034783
ORF1ab/nsp3970T970TacGacT1212B.1.177.430.017725
ORF1ab/nsp3970T970TacGacT1112B.1.6210.000974
ORF1ab/nsp3970T970TacGacA112B.1.6210.000089
ORF1ab/nsp3970T970TacGacT912P.1.140.00043
ORF1ab/nsp3970T970TacGacA312P.1.140.000143
ORF1ab/nsp3970T970TacGacT1011AY.50.000206
ORF1ab/nsp3970T970TacGacC111AY.50.000021
ORF1ab/nsp3970T970TacGacT910AY.230.000628
ORF1ab/nsp3970T970TacGacA110AY.230.00007
ORF1ab/nsp3970T970TacGacT1010AY.420.000402
ORF1ab/nsp3970T970TacGacA69AY.260.00017
ORF1ab/nsp3970T970TacGacT39AY.260.000085
ORF1ab/nsp3970T970TacGacT99B.1.1.4190.066667
ORF1ab/nsp3970T970TacGacT89B.1.1.5180.050633
ORF1ab/nsp3970T970TacGacA19B.1.1.5180.006329
ORF1ab/nsp3970T970TacGacT99B.1.6200.008515
ORF1ab/nsp3970T970TacGacT99P.1.120.004356
ORF1ab/nsp3970T970TacGacT88B0.001022
ORF1ab/nsp3970T970TacGacT88B.1.1.1360.170213
ORF1ab/nsp3970T970TacGacT88B.1.1.2160.007124
ORF1ab/nsp3970T970TacGacT68B.1.1.5190.000238
ORF1ab/nsp3970T970TacGacA28B.1.1.5190.000079
ORF1ab/nsp3970T970TacGacT88B.1.5090.006926
ORF1ab/nsp3970T970TacGacT77AY.130.001127
ORF1ab/nsp3970T970TacGacA57AY.4.20.000108
ORF1ab/nsp3970T970TacGacT27AY.4.20.000043
ORF1ab/nsp3970T970TacGacT77AY.610.000733
ORF1ab/nsp3970T970TacGacT77AY.980.000553
ORF1ab/nsp3970T970TacGacT77AY.98.10.000339
ORF1ab/nsp3970T970TacGacA47B.1.1.2840.00043
ORF1ab/nsp3970T970TacGacT37B.1.1.2840.000322
ORF1ab/nsp3970T970TacGacT77B.1.360.001021
ORF1ab/nsp3970T970TacGacT77B.1.5610.002779
ORF1ab/nsp3970T970TacGacT66AY.1100.000676
ORF1ab/nsp3970T970TacGacT56AY.1190.000177
ORF1ab/nsp3970T970TacGacA16AY.1190.000035
ORF1ab/nsp3970T970TacGacT56AY.540.000477
ORF1ab/nsp3970T970TacGacA16AY.540.000095
ORF1ab/nsp3970T970TacGacT66AY.750.000336
ORF1ab/nsp3970T970TacGacT56B.1.2580.000333
ORF1ab/nsp3970T970TacGacA16B.1.2580.000067
ORF1ab/nsp3970T970TacGacT66B.1.3960.004234
ORF1ab/nsp3970T970TacGacT55B.1.1.2000.037313
ORF1ab/nsp3970T970TacGacT55B.1.1.700.001705
ORF1ab/nsp3970T970TacGacT55B.1.4730.096154
ORF1ab/nsp3970T970TacGacT55B.1.617.10.000645
ORF1ab/nsp3970T970TacGacA55P.1.70.001596
ORF1ab/nsp3970T970TacGacT34AY.1170.000254
ORF1ab/nsp3970T970TacGacA14AY.1170.000085
ORF1ab/nsp3970T970TacGacA34AY.39.10.000119
ORF1ab/nsp3970T970TacGacT14AY.39.10.00004
ORF1ab/nsp3970T970TacGacT34AY.450.000365
ORF1ab/nsp3970T970TacGacA14AY.450.000122
ORF1ab/nsp3970T970TacGacT34AY.460.000312
ORF1ab/nsp3970T970TacGacA14AY.460.000104
ORF1ab/nsp3970T970TacGacT44AY.7.10.000451
ORF1ab/nsp3970T970TacGacT44AY.920.001149
ORF1ab/nsp3970T970TacGacT44B.1.1.3720.002755
ORF1ab/nsp3970T970TacGacT44B.1.1.930.102564
ORF1ab/nsp3970T970TacGacT44B.1.177.570.001124
ORF1ab/nsp3970T970TacGacT44B.1.177.730.002265
ORF1ab/nsp3970T970TacGacT44B.1.4650.015209
ORF1ab/nsp3970T970TacGacA44B.1.619.10.002566
ORF1ab/nsp3970T970TacGacT44C.270.074074
ORF1ab/nsp3970T970TacGacT44C.350.003096
ORF1ab/nsp3970T970TacGacT34C.370.000348
ORF1ab/nsp3970T970TacGacA14C.370.000116
ORF1ab/nsp3970T970TacGacA44P.1.150.000929
ORF1ab/nsp3970T970TacGacT33AY.10.001187
ORF1ab/nsp3970T970TacGacT33AY.1010.001471
ORF1ab/nsp3970T970TacGacT23AY.120.2.10.000997
ORF1ab/nsp3970T970TacGacA13AY.120.2.10.000498
ORF1ab/nsp3970T970TacGacT33AY.280.005671
ORF1ab/nsp3970T970TacGacT33AY.5.30.001012
ORF1ab/nsp3970T970TacGacT33AY.550.002752
ORF1ab/nsp3970T970TacGacT33AY.600.002814
ORF1ab/nsp3970T970TacGacT33B.1.1.2730.02027
ORF1ab/nsp3970T970TacGacT23B.1.1.3170.000823
ORF1ab/nsp3970T970TacGacA13B.1.1.3170.000412
ORF1ab/nsp3970T970TacGacT33B.1.177.230.009709
ORF1ab/nsp3970T970TacGacT33B.1.2600.010033
ORF1ab/nsp3970T970TacGacT23B.1.3510.000059
ORF1ab/nsp3970T970TacGacA13B.1.3510.00003
ORF1ab/nsp3970T970TacGacT33B.1.36.290.001552
ORF1ab/nsp3970T970TacGacT33B.1.36.80.003
ORF1ab/nsp3970T970TacGacT33B.1.4090.002344
ORF1ab/nsp3970T970TacGacT33B.1.416.10.004687
ORF1ab/nsp3970T970TacGacT23B.1.5960.000174
ORF1ab/nsp3970T970TacGacA13B.1.5960.000087
ORF1ab/nsp3970T970TacGacT33B.1.6090.001438
ORF1ab/nsp3970T970TacGacT23P.20.000373
ORF1ab/nsp3970T970TacGacA13P.20.000187
ORF1ab/nsp3970T970TacGacT22A0.000774
ORF1ab/nsp3970T970TacGacT22AY.1000.000092
ORF1ab/nsp3970T970TacGacT22AY.1050.001286
ORF1ab/nsp3970T970TacGacT22AY.1070.000932
ORF1ab/nsp3970T970TacGacT22AY.1210.000271
ORF1ab/nsp3970T970TacGacT22AY.400.001929
ORF1ab/nsp3970T970TacGacT22AY.470.000062
ORF1ab/nsp3970T970TacGacT22AY.530.000575
ORF1ab/nsp3970T970TacGacT22AY.580.001815
ORF1ab/nsp3970T970TacGacA12AY.670.000464
ORF1ab/nsp3970T970TacGacT12AY.670.000464
ORF1ab/nsp3970T970TacGacT22AY.770.002255
ORF1ab/nsp3970T970TacGacT22B.1.1.10.000653
ORF1ab/nsp3970T970TacGacA22B.1.1.2140.000111
ORF1ab/nsp3970T970TacGacC12B.1.1.2220.000204
ORF1ab/nsp3970T970TacGacT12B.1.1.2220.000204
ORF1ab/nsp3970T970TacGacT22B.1.1.2410.004141
ORF1ab/nsp3970T970TacGacA22B.1.1.2630.003115
ORF1ab/nsp3970T970TacGacT22B.1.1.2770.001517
ORF1ab/nsp3970T970TacGacT22B.1.1.330.000842
ORF1ab/nsp3970T970TacGacT22B.1.1.370.000386
ORF1ab/nsp3970T970TacGacT22B.1.1.3740.004751
ORF1ab/nsp3970T970TacGacT22B.1.1.500.001358
ORF1ab/nsp3970T970TacGacA22B.1.1.5210.010695
ORF1ab/nsp3970T970TacGacT22B.1.1640.029851
ORF1ab/nsp3970T970TacGacT22B.1.177.100.001756
ORF1ab/nsp3970T970TacGacT22B.1.177.500.00939
ORF1ab/nsp3970T970TacGacT22B.1.177.70.00033
ORF1ab/nsp3970T970TacGacT22B.1.177.810.000379
ORF1ab/nsp3970T970TacGacT22B.1.177.870.001456
ORF1ab/nsp3970T970TacGacT22B.1.2060.001631
ORF1ab/nsp3970T970TacGacT22B.1.36.10.002281
ORF1ab/nsp3970T970TacGacT22B.1.4620.014493
ORF1ab/nsp3970T970TacGacT22B.1.4680.011429
ORF1ab/nsp3970T970TacGacT22B.1.5760.001813
ORF1ab/nsp3970T970TacGacT22B.1.6370.000146
ORF1ab/nsp3970T970TacGacT22B.60.00182
ORF1ab/nsp3970T970TacGacT11A.2.50.000499
ORF1ab/nsp3970T970TacGacA11A.23.10.000704
ORF1ab/nsp3970T970TacGacT11AN.10.02
ORF1ab/nsp3970T970TacGacT11AY.1110.000183
ORF1ab/nsp3970T970TacGacT11AY.1180.000063
ORF1ab/nsp3970T970TacGacT11AY.120.000316
ORF1ab/nsp3970T970TacGacA11AY.1200.000037
ORF1ab/nsp3970T970TacGacA11AY.16.10.00047
ORF1ab/nsp3970T970TacGacA11AY.240.000431
ORF1ab/nsp3970T970TacGacT11AY.270.000065
ORF1ab/nsp3970T970TacGacT11AY.290.000016
ORF1ab/nsp3970T970TacGacT11AY.320.000532
ORF1ab/nsp3970T970TacGacT11AY.34.10.00051
ORF1ab/nsp3970T970TacGacT11AY.4.10.000737
ORF1ab/nsp3970T970TacGacT11AY.46.50.000198
ORF1ab/nsp3970T970TacGacT11AY.520.000814
ORF1ab/nsp3970T970TacGacA11AY.590.00053
ORF1ab/nsp3970T970TacGacT11AY.690.000187
ORF1ab/nsp3970T970TacGacT11AY.710.000475
ORF1ab/nsp3970T970TacGacT11AY.720.001361
ORF1ab/nsp3970T970TacGacT11AY.740.000116
ORF1ab/nsp3970T970TacGacA11AY.75.10.00018
ORF1ab/nsp3970T970TacGacT11AY.880.000884
ORF1ab/nsp3970T970TacGacT11AY.90.000068
ORF1ab/nsp3970T970TacGacT11AY.9.20.000037
ORF1ab/nsp3970T970TacGacT11AY.910.00073
ORF1ab/nsp3970T970TacGacT11AY.960.002075
ORF1ab/nsp3970T970TacGacT11B.1.1.1530.001095
ORF1ab/nsp3970T970TacGacT11B.1.1.1740.003378
ORF1ab/nsp3970T970TacGacT11B.1.1.1760.000439
ORF1ab/nsp3970T970TacGacT11B.1.1.1920.002309
ORF1ab/nsp3970T970TacGacA11B.1.1.2200.001859
ORF1ab/nsp3970T970TacGacT11B.1.1.2360.006897
ORF1ab/nsp3970T970TacGacT11B.1.1.2430.004082
ORF1ab/nsp3970T970TacGacA11B.1.1.2650.003155
ORF1ab/nsp3970T970TacGacT11B.1.1.2690.001353
ORF1ab/nsp3970T970TacGacT11B.1.1.3010.001179
ORF1ab/nsp3970T970TacGacT11B.1.1.3040.002809
ORF1ab/nsp3970T970TacGacT11B.1.1.3180.000302
ORF1ab/nsp3970T970TacGacT11B.1.1.3430.020833
ORF1ab/nsp3970T970TacGacT11B.1.1.4090.002833
ORF1ab/nsp3970T970TacGacA11B.1.1.4160.000905
ORF1ab/nsp3970T970TacGacT11B.1.1.4480.002033
ORF1ab/nsp3970T970TacGacT11B.1.1.4640.001473
ORF1ab/nsp3970T970TacGacT11B.1.1150.021739
ORF1ab/nsp3970T970TacGacT11B.1.1240.007812
ORF1ab/nsp3970T970TacGacT11B.1.1390.000733
ORF1ab/nsp3970T970TacGacT11B.1.177.120.000152
ORF1ab/nsp3970T970TacGacT11B.1.177.330.001645
ORF1ab/nsp3970T970TacGacT11B.1.177.60.000977
ORF1ab/nsp3970T970TacGacT11B.1.177.770.000726
ORF1ab/nsp3970T970TacGacT11B.1.177.80.000752
ORF1ab/nsp3970T970TacGacT11B.1.2100.002132
ORF1ab/nsp3970T970TacGacT11B.1.214.20.0006
ORF1ab/nsp3970T970TacGacT11B.1.2220.001692
ORF1ab/nsp3970T970TacGacT11B.1.2360.002053
ORF1ab/nsp3970T970TacGacT11B.1.2410.000812
ORF1ab/nsp3970T970TacGacT11B.1.2680.010417
ORF1ab/nsp3970T970TacGacT11B.1.3330.010526
ORF1ab/nsp3970T970TacGacC11B.1.351.20.000303
ORF1ab/nsp3970T970TacGacT11B.1.351.30.000876
ORF1ab/nsp3970T970TacGacT11B.1.36.160.001425
ORF1ab/nsp3970T970TacGacT11B.1.36.220.001208
ORF1ab/nsp3970T970TacGacT11B.1.3670.000792
ORF1ab/nsp3970T970TacGacT11B.1.3690.000285
ORF1ab/nsp3970T970TacGacT11B.1.3710.001122
ORF1ab/nsp3970T970TacGacT11B.1.3780.006849
ORF1ab/nsp3970T970TacGacT11B.1.4280.00102
ORF1ab/nsp3970T970TacGacT11B.1.4380.006536
ORF1ab/nsp3970T970TacGacT11B.1.4600.017857
ORF1ab/nsp3970T970TacGacT11B.1.4670.04
ORF1ab/nsp3970T970TacGacT11B.1.4970.000315
ORF1ab/nsp3970T970TacGacT11B.1.4990.00105
ORF1ab/nsp3970T970TacGacA11B.1.5250.000113
ORF1ab/nsp3970T970TacGacT11B.1.5330.009615
ORF1ab/nsp3970T970TacGacT11B.1.5420.03125
ORF1ab/nsp3970T970TacGacT11B.1.5670.003333
ORF1ab/nsp3970T970TacGacA11B.1.5970.00463
ORF1ab/nsp3970T970TacGacA11B.1.6020.006536
ORF1ab/nsp3970T970TacGacT11B.1.930.000934
ORF1ab/nsp3970T970TacGacT11B.110.005128
ORF1ab/nsp3970T970TacGacT11B.400.000364
ORF1ab/nsp3970T970TacGacT11B.520.010101
ORF1ab/nsp3970T970TacGacT11B.550.00295
ORF1ab/nsp3970T970TacGacA11N.50.001767
ORF1ab/nsp3970T970TacGacT11P.1.10.000318
ORF1ab/nsp3970T970TacGacT11P.1.160.000374
ORF1ab/nsp3970T970TacGacT11P.1.170.000162
ORF1ab/nsp3970T970TacGacT11Q.30.000145
ORF1ab/nsp3970T970TacGacT11Q.80.000165