CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T942del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3942T942del1T1760del1delaCaa-a85810.9529415543-5545
ORF1ab/nsp3942T942del1T1760del1delacAac-8540.04705885543-5545

Details of the mutation T942del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3942T942del1aCaa-a8185All0.000015
ORF1ab/nsp3942T942del1acAac-485All0.000001
ORF1ab/nsp3942T942del1aCaa-a6666B.1.1.70.000059
ORF1ab/nsp3942T942del1acAac-24B.1.20.000018
ORF1ab/nsp3942T942del1aCaa-a24B.1.20.000018
ORF1ab/nsp3942T942del1aCaa-a33B.1.177.820.001432
ORF1ab/nsp3942T942del1aCaa-a33B.1.3510.000089
ORF1ab/nsp3942T942del1aCaa-a22AY.520.001629
ORF1ab/nsp3942T942del1aCaa-a22B.1.1600.000062
ORF1ab/nsp3942T942del1aCaa-a11B.1.177.60.000977
ORF1ab/nsp3942T942del1acAac-11B.1.2580.000067
ORF1ab/nsp3942T942del1aCaa-a11B.1.36.10.00114
ORF1ab/nsp3942T942del1acAac-11B.1.617.20.000004
ORF1ab/nsp3942T942del1aCaa-a11R.10.00009