CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T864T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3864T864TT1682TsynacAacG2592290.884175309-5311
ORF1ab/nsp3864T864TT1682TsynacAacT259170.06563715309-5311
ORF1ab/nsp3864T864TT1682TsynacAacC259130.0501935309-5311

Details of the mutation T864T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3864T864TacAacG229259All0.000044
ORF1ab/nsp3864T864TacAacT17259All0.000003
ORF1ab/nsp3864T864TacAacC13259All0.000002
ORF1ab/nsp3864T864TacAacG7980B.1.2430.005497
ORF1ab/nsp3864T864TacAacC180B.1.2430.00007
ORF1ab/nsp3864T864TacAacG3232B.1.1.3521
ORF1ab/nsp3864T864TacAacG1022B.1.1.70.000009
ORF1ab/nsp3864T864TacAacT922B.1.1.70.000008
ORF1ab/nsp3864T864TacAacC322B.1.1.70.000003
ORF1ab/nsp3864T864TacAacG2020AY.250.00012
ORF1ab/nsp3864T864TacAacG1213B.1.10.000218
ORF1ab/nsp3864T864TacAacC113B.1.10.000018
ORF1ab/nsp3864T864TacAacG1012B.10.000092
ORF1ab/nsp3864T864TacAacT112B.10.000009
ORF1ab/nsp3864T864TacAacC112B.10.000009
ORF1ab/nsp3864T864TacAacG1112P.10.000173
ORF1ab/nsp3864T864TacAacT112P.10.000016
ORF1ab/nsp3864T864TacAacG99B.1.5960.000784
ORF1ab/nsp3864T864TacAacG66AY.30.00006
ORF1ab/nsp3864T864TacAacC66B.1.177.810.001136
ORF1ab/nsp3864T864TacAacG55B.1.1.2140.000277
ORF1ab/nsp3864T864TacAacG44AY.3.10.000341
ORF1ab/nsp3864T864TacAacG44B.1.1.830.01084
ORF1ab/nsp3864T864TacAacG44B.1.3510.000119
ORF1ab/nsp3864T864TacAacG23AY.440.000012
ORF1ab/nsp3864T864TacAacT13AY.440.000006
ORF1ab/nsp3864T864TacAacG33B.1.617.20.000011
ORF1ab/nsp3864T864TacAacG22AY.1020.000053
ORF1ab/nsp3864T864TacAacG22AY.50.000041
ORF1ab/nsp3864T864TacAacG22B.1.1.4200.002012
ORF1ab/nsp3864T864TacAacT11A0.000387
ORF1ab/nsp3864T864TacAacT11AY.1090.00074
ORF1ab/nsp3864T864TacAacG11AY.140.000088
ORF1ab/nsp3864T864TacAacT11AY.260.000028
ORF1ab/nsp3864T864TacAacG11AY.340.000097
ORF1ab/nsp3864T864TacAacG11AY.380.000499
ORF1ab/nsp3864T864TacAacT11AY.40.000002
ORF1ab/nsp3864T864TacAacG11AY.4.20.000022
ORF1ab/nsp3864T864TacAacG11AY.750.000056
ORF1ab/nsp3864T864TacAacG11B.1.1.270.00565
ORF1ab/nsp3864T864TacAacG11B.1.1.3060.000438
ORF1ab/nsp3864T864TacAacG11B.1.1.5260.003546
ORF1ab/nsp3864T864TacAacG11B.1.1770.000013
ORF1ab/nsp3864T864TacAacG11B.1.2580.000067
ORF1ab/nsp3864T864TacAacT11B.1.5770.000687
ORF1ab/nsp3864T864TacAacC11D.20.000075
ORF1ab/nsp3864T864TacAacG11P.1.120.000484
ORF1ab/nsp3864T864TacAacG11P.1.170.000162