CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T847del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3847T847del1T1665del1delacTac-3523500.9943185258-5260
ORF1ab/nsp3847T847del1T1665del1delaCta-t35220.005681825258-5260

Details of the mutation T847del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3847T847del1acTac-350352All0.000067
ORF1ab/nsp3847T847del1aCta-t2352All0
ORF1ab/nsp3847T847del1acTac-9292B.1.1.70.000082
ORF1ab/nsp3847T847del1acTac-6767B.1.617.10.008641
ORF1ab/nsp3847T847del1acTac-4546B.10.000412
ORF1ab/nsp3847T847del1aCta-t146B.10.000009
ORF1ab/nsp3847T847del1acTac-4343AY.440.000262
ORF1ab/nsp3847T847del1acTac-1515AY.1030.000093
ORF1ab/nsp3847T847del1acTac-1212B.1.10.000218
ORF1ab/nsp3847T847del1acTac-66AY.390.000148
ORF1ab/nsp3847T847del1acTac-55AY.250.00003
ORF1ab/nsp3847T847del1acTac-55B.1.5760.004533
ORF1ab/nsp3847T847del1acTac-44AY.1000.000184
ORF1ab/nsp3847T847del1acTac-44AY.30.00004
ORF1ab/nsp3847T847del1acTac-44AY.470.000124
ORF1ab/nsp3847T847del1acTac-44B.1.3750.003279
ORF1ab/nsp3847T847del1acTac-33AY.1130.000427
ORF1ab/nsp3847T847del1acTac-33AY.1190.000106
ORF1ab/nsp3847T847del1acTac-33AY.750.000168
ORF1ab/nsp3847T847del1acTac-33B.1.5250.000339
ORF1ab/nsp3847T847del1acTac-22AY.10.000791
ORF1ab/nsp3847T847del1acTac-22AY.260.000057
ORF1ab/nsp3847T847del1acTac-22AY.540.000191
ORF1ab/nsp3847T847del1acTac-22AY.950.001522
ORF1ab/nsp3847T847del1acTac-22B.1.177.730.001133
ORF1ab/nsp3847T847del1acTac-22B.1.617.20.000008
ORF1ab/nsp3847T847del1acTac-22B.1.6200.001892
ORF1ab/nsp3847T847del1acTac-11A.23.10.000704
ORF1ab/nsp3847T847del1acTac-11AY.120.10.000321
ORF1ab/nsp3847T847del1acTac-11AY.16.10.00047
ORF1ab/nsp3847T847del1acTac-11AY.200.000039
ORF1ab/nsp3847T847del1acTac-11B.1.1450.052632
ORF1ab/nsp3847T847del1acTac-11B.1.177.70.000165
ORF1ab/nsp3847T847del1acTac-11B.1.2140.003663
ORF1ab/nsp3847T847del1acTac-11B.1.3510.00003
ORF1ab/nsp3847T847del1aCta-t11B.1.360.000146
ORF1ab/nsp3847T847del1acTac-11B.1.36.290.000517
ORF1ab/nsp3847T847del1acTac-11B.1.4240.008065
ORF1ab/nsp3847T847del1acTac-11B.1.4560.003268
ORF1ab/nsp3847T847del1acTac-11B.1.4650.003802
ORF1ab/nsp3847T847del1acTac-11B.1.5330.009615
ORF1ab/nsp3847T847del1acTac-11B.1.5370.02
ORF1ab/nsp3847T847del1acTac-11B.1.5600.00463
ORF1ab/nsp3847T847del1acTac-11B.1.617.30.002985
ORF1ab/nsp3847T847del1acTac-11B.1.6210.000089
ORF1ab/nsp3847T847del1acTac-11C.10.002392