CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T820I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3820T820IT1638InonsynaCtaTt2495249515177-5179

Details of the mutation T820I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3820T820IaCtaTt24952495All0.000477
ORF1ab/nsp3820T820IaCtaTt955955B.1.1.4200.960765
ORF1ab/nsp3820T820IaCtaTt237237AY.30.002357
ORF1ab/nsp3820T820IaCtaTt198198B.1.1.70.000177
ORF1ab/nsp3820T820IaCtaTt114114B.10.001044
ORF1ab/nsp3820T820IaCtaTt101101B.1.10.001832
ORF1ab/nsp3820T820IaCtaTt9292B.1.20.00081
ORF1ab/nsp3820T820IaCtaTt7171B.1.6290.946667
ORF1ab/nsp3820T820IaCtaTt7070AY.40.000109
ORF1ab/nsp3820T820IaCtaTt5050AY.4.20.001084
ORF1ab/nsp3820T820IaCtaTt4747B.1.617.20.000177
ORF1ab/nsp3820T820IaCtaTt4444B.1.1770.000579
ORF1ab/nsp3820T820IaCtaTt4141B.1.6161
ORF1ab/nsp3820T820IaCtaTt2424B.1.1.5150.48
ORF1ab/nsp3820T820IaCtaTt2222B.1.1490.075342
ORF1ab/nsp3820T820IaCtaTt2020B.1.1600.000624
ORF1ab/nsp3820T820IaCtaTt1717B.1.6330.708333
ORF1ab/nsp3820T820IaCtaTt1515AY.1030.000093
ORF1ab/nsp3820T820IaCtaTt1313AY.140.001144
ORF1ab/nsp3820T820IaCtaTt1212A0.004644
ORF1ab/nsp3820T820IaCtaTt1111AY.250.000066
ORF1ab/nsp3820T820IaCtaTt1010AY.440.000061
ORF1ab/nsp3820T820IaCtaTt1010B.1.258.170.00104
ORF1ab/nsp3820T820IaCtaTt88AY.430.000035
ORF1ab/nsp3820T820IaCtaTt88B.1.2210.000568
ORF1ab/nsp3820T820IaCtaTt88B.1.2580.000532
ORF1ab/nsp3820T820IaCtaTt88P.10.000126
ORF1ab/nsp3820T820IaCtaTt77AY.1190.000247
ORF1ab/nsp3820T820IaCtaTt77AY.390.000173
ORF1ab/nsp3820T820IaCtaTt77AY.39.10.000277
ORF1ab/nsp3820T820IaCtaTt77AY.450.000852
ORF1ab/nsp3820T820IaCtaTt77B0.000895
ORF1ab/nsp3820T820IaCtaTt77B.1.2430.000487
ORF1ab/nsp3820T820IaCtaTt66B.1.4290.000141
ORF1ab/nsp3820T820IaCtaTt55B.1.1.2320.009074
ORF1ab/nsp3820T820IaCtaTt55B.1.36.290.002587
ORF1ab/nsp3820T820IaCtaTt55B.1.4270.000252
ORF1ab/nsp3820T820IaCtaTt55B.1.5260.000118
ORF1ab/nsp3820T820IaCtaTt55B.4.50.059524
ORF1ab/nsp3820T820IaCtaTt44AE.80.001956
ORF1ab/nsp3820T820IaCtaTt44AY.1140.000924
ORF1ab/nsp3820T820IaCtaTt44AY.1200.000149
ORF1ab/nsp3820T820IaCtaTt44B.1.1.280.001245
ORF1ab/nsp3820T820IaCtaTt44B.1.3510.000119
ORF1ab/nsp3820T820IaCtaTt44B.1.4700.005618
ORF1ab/nsp3820T820IaCtaTt44B.1.5960.000349
ORF1ab/nsp3820T820IaCtaTt44B.1.6190.003484
ORF1ab/nsp3820T820IaCtaTt44B.1.6210.000354
ORF1ab/nsp3820T820IaCtaTt44B.1.621.10.002023
ORF1ab/nsp3820T820IaCtaTt44B.1.930.003735
ORF1ab/nsp3820T820IaCtaTt33A.20.001985
ORF1ab/nsp3820T820IaCtaTt33AH.30.011407
ORF1ab/nsp3820T820IaCtaTt33AY.1000.000138
ORF1ab/nsp3820T820IaCtaTt33AY.230.000209
ORF1ab/nsp3820T820IaCtaTt33AY.330.0002
ORF1ab/nsp3820T820IaCtaTt33AY.60.000123
ORF1ab/nsp3820T820IaCtaTt33B.1.1.10.00098
ORF1ab/nsp3820T820IaCtaTt33B.1.1.4340.001046
ORF1ab/nsp3820T820IaCtaTt33B.1.177.430.004431
ORF1ab/nsp3820T820IaCtaTt33B.1.177.800.005736
ORF1ab/nsp3820T820IaCtaTt33B.1.360.000438
ORF1ab/nsp3820T820IaCtaTt33C.370.000348
ORF1ab/nsp3820T820IaCtaTt22A.23.10.001408
ORF1ab/nsp3820T820IaCtaTt22AA.10.014493
ORF1ab/nsp3820T820IaCtaTt22AT.10.010256
ORF1ab/nsp3820T820IaCtaTt22AY.1020.000053
ORF1ab/nsp3820T820IaCtaTt22AY.1180.000125
ORF1ab/nsp3820T820IaCtaTt22AY.200.000078
ORF1ab/nsp3820T820IaCtaTt22AY.290.000032
ORF1ab/nsp3820T820IaCtaTt22AY.3.10.000171
ORF1ab/nsp3820T820IaCtaTt22AY.50.000041
ORF1ab/nsp3820T820IaCtaTt22AY.550.001835
ORF1ab/nsp3820T820IaCtaTt22B.1.1.2220.000408
ORF1ab/nsp3820T820IaCtaTt22B.1.1.3690.000892
ORF1ab/nsp3820T820IaCtaTt22B.1.1.4160.00181
ORF1ab/nsp3820T820IaCtaTt22B.1.1.500.001358
ORF1ab/nsp3820T820IaCtaTt22B.1.1.5190.000079
ORF1ab/nsp3820T820IaCtaTt22B.1.1.830.00542
ORF1ab/nsp3820T820IaCtaTt22B.1.177.160.001329
ORF1ab/nsp3820T820IaCtaTt22B.1.177.330.003289
ORF1ab/nsp3820T820IaCtaTt22B.1.177.420.001789
ORF1ab/nsp3820T820IaCtaTt22B.1.177.670.015267
ORF1ab/nsp3820T820IaCtaTt22B.1.2200.021739
ORF1ab/nsp3820T820IaCtaTt22B.1.3110.000549
ORF1ab/nsp3820T820IaCtaTt22B.1.3140.015038
ORF1ab/nsp3820T820IaCtaTt22B.1.390.007812
ORF1ab/nsp3820T820IaCtaTt22B.1.4090.001563
ORF1ab/nsp3820T820IaCtaTt22B.1.5760.001813
ORF1ab/nsp3820T820IaCtaTt22B.1.5820.000981
ORF1ab/nsp3820T820IaCtaTt22B.1.5950.000522
ORF1ab/nsp3820T820IaCtaTt22P.30.00319
ORF1ab/nsp3820T820IaCtaTt22V.10.045455
ORF1ab/nsp3820T820IaCtaTt11A.250.018182
ORF1ab/nsp3820T820IaCtaTt11AY.1170.000085
ORF1ab/nsp3820T820IaCtaTt11AY.1210.000135
ORF1ab/nsp3820T820IaCtaTt11AY.260.000028
ORF1ab/nsp3820T820IaCtaTt11AY.320.000532
ORF1ab/nsp3820T820IaCtaTt11AY.410.000294
ORF1ab/nsp3820T820IaCtaTt11AY.420.00004
ORF1ab/nsp3820T820IaCtaTt11AY.460.000104
ORF1ab/nsp3820T820IaCtaTt11AY.46.40.000165
ORF1ab/nsp3820T820IaCtaTt11AY.46.60.000072
ORF1ab/nsp3820T820IaCtaTt11AY.750.000056
ORF1ab/nsp3820T820IaCtaTt11AY.930.000273
ORF1ab/nsp3820T820IaCtaTt11AY.940.000443
ORF1ab/nsp3820T820IaCtaTt11AY.980.000079
ORF1ab/nsp3820T820IaCtaTt11AY.98.10.000048
ORF1ab/nsp3820T820IaCtaTt11AZ.20.000821
ORF1ab/nsp3820T820IaCtaTt11B.1.1.100.001115
ORF1ab/nsp3820T820IaCtaTt11B.1.1.1010.01
ORF1ab/nsp3820T820IaCtaTt11B.1.1.1170.009709
ORF1ab/nsp3820T820IaCtaTt11B.1.1.1700.001247
ORF1ab/nsp3820T820IaCtaTt11B.1.1.1740.003378
ORF1ab/nsp3820T820IaCtaTt11B.1.1.2000.007463
ORF1ab/nsp3820T820IaCtaTt11B.1.1.2160.00089
ORF1ab/nsp3820T820IaCtaTt11B.1.1.2540.011236
ORF1ab/nsp3820T820IaCtaTt11B.1.1.2770.000759
ORF1ab/nsp3820T820IaCtaTt11B.1.1.2910.000742
ORF1ab/nsp3820T820IaCtaTt11B.1.1.2940.001266
ORF1ab/nsp3820T820IaCtaTt11B.1.1.3070.002532
ORF1ab/nsp3820T820IaCtaTt11B.1.1.330.000421
ORF1ab/nsp3820T820IaCtaTt11B.1.1.3480.000796
ORF1ab/nsp3820T820IaCtaTt11B.1.1.4090.002833
ORF1ab/nsp3820T820IaCtaTt11B.1.1.4170.002703
ORF1ab/nsp3820T820IaCtaTt11B.1.1.4320.001266
ORF1ab/nsp3820T820IaCtaTt11B.1.1.4360.025641
ORF1ab/nsp3820T820IaCtaTt11B.1.1.5180.006329
ORF1ab/nsp3820T820IaCtaTt11B.1.1.5250.005464
ORF1ab/nsp3820T820IaCtaTt11B.1.1.560.017857
ORF1ab/nsp3820T820IaCtaTt11B.1.1110.001175
ORF1ab/nsp3820T820IaCtaTt11B.1.160.330.004425
ORF1ab/nsp3820T820IaCtaTt11B.1.177.320.00135
ORF1ab/nsp3820T820IaCtaTt11B.1.177.40.000211
ORF1ab/nsp3820T820IaCtaTt11B.1.177.50.001242
ORF1ab/nsp3820T820IaCtaTt11B.1.177.520.001757
ORF1ab/nsp3820T820IaCtaTt11B.1.177.600.000218
ORF1ab/nsp3820T820IaCtaTt11B.1.177.70.000165
ORF1ab/nsp3820T820IaCtaTt11B.1.177.770.000726
ORF1ab/nsp3820T820IaCtaTt11B.1.177.810.000189
ORF1ab/nsp3820T820IaCtaTt11B.1.177.860.000183
ORF1ab/nsp3820T820IaCtaTt11B.1.2100.002132
ORF1ab/nsp3820T820IaCtaTt11B.1.2190.009434
ORF1ab/nsp3820T820IaCtaTt11B.1.2340.000132
ORF1ab/nsp3820T820IaCtaTt11B.1.2370.004975
ORF1ab/nsp3820T820IaCtaTt11B.1.2420.018868
ORF1ab/nsp3820T820IaCtaTt11B.1.2650.001271
ORF1ab/nsp3820T820IaCtaTt11B.1.3150.006061
ORF1ab/nsp3820T820IaCtaTt11B.1.351.20.000303
ORF1ab/nsp3820T820IaCtaTt11B.1.3960.000706
ORF1ab/nsp3820T820IaCtaTt11B.1.4040.001302
ORF1ab/nsp3820T820IaCtaTt11B.1.4200.010417
ORF1ab/nsp3820T820IaCtaTt11B.1.4220.000812
ORF1ab/nsp3820T820IaCtaTt11B.1.4250.002994
ORF1ab/nsp3820T820IaCtaTt11B.1.4340.052632
ORF1ab/nsp3820T820IaCtaTt11B.1.5650.00081
ORF1ab/nsp3820T820IaCtaTt11B.1.5680.001111
ORF1ab/nsp3820T820IaCtaTt11B.1.5770.000687
ORF1ab/nsp3820T820IaCtaTt11B.1.6090.000479
ORF1ab/nsp3820T820IaCtaTt11B.1.6180.004032
ORF1ab/nsp3820T820IaCtaTt11B.1.6230.000536
ORF1ab/nsp3820T820IaCtaTt11B.1.6360.006711
ORF1ab/nsp3820T820IaCtaTt11C.350.000774
ORF1ab/nsp3820T820IaCtaTt11D.20.000075
ORF1ab/nsp3820T820IaCtaTt11P.1.120.000484
ORF1ab/nsp3820T820IaCtaTt11P.1.90.004808
ORF1ab/nsp3820T820IaCtaTt11Q.70.001111
ORF1ab/nsp3820T820IaCtaTt11Q.80.000165
ORF1ab/nsp3820T820IaCtaTt11R.10.00009