CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T819I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3819T819IT1637InonsynaCaaTa725472530.9998625174-5176
ORF1ab/nsp3819T819IT1637InonsynaCAaTC725410.0001378555174-5176

Details of the mutation T819I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3819T819IaCaaTa72537254All0.001387
ORF1ab/nsp3819T819IaCAaTC17254All0
ORF1ab/nsp3819T819IaCaaTa35273527B.1.258.170.366708
ORF1ab/nsp3819T819IaCaaTa844844B.1.1.70.000756
ORF1ab/nsp3819T819IaCaaTa322322B.1.1.2550.975758
ORF1ab/nsp3819T819IaCaaTa312312AY.40.000486
ORF1ab/nsp3819T819IaCaaTa174174C.1.20.740426
ORF1ab/nsp3819T819IaCaaTa114114B.1.36.180.047899
ORF1ab/nsp3819T819IaCaaTa107107B.1.617.20.000403
ORF1ab/nsp3819T819IaCaaTa9898AY.250.000589
ORF1ab/nsp3819T819IaCaaTa9797B.10.000888
ORF1ab/nsp3819T819IaCaaTa9191B.1.177.780.883495
ORF1ab/nsp3819T819IaCaaTa7171B.1.20.000625
ORF1ab/nsp3819T819IaCaaTa6969B.1.160.200.616071
ORF1ab/nsp3819T819IaCaaTa6868B.1.2580.004525
ORF1ab/nsp3819T819IaCaaTa6161AY.200.002371
ORF1ab/nsp3819T819IaCaaTa6161B.1.1600.001902
ORF1ab/nsp3819T819IaCaaTa6060B.1.1770.00079
ORF1ab/nsp3819T819IaCaaTa5858P.50.794521
ORF1ab/nsp3819T819IaCaaTa5555AY.1030.000341
ORF1ab/nsp3819T819IaCaaTa5555AY.330.003673
ORF1ab/nsp3819T819IaCaaTa4849AY.430.000213
ORF1ab/nsp3819T819IaCAaTC149AY.430.000004
ORF1ab/nsp3819T819IaCaaTa4444AY.116.10.013703
ORF1ab/nsp3819T819IaCaaTa4343P.10.000677
ORF1ab/nsp3819T819IaCaaTa4040B.1.10.000726
ORF1ab/nsp3819T819IaCaaTa3939AY.30.000388
ORF1ab/nsp3819T819IaCaaTa3838AY.440.000231
ORF1ab/nsp3819T819IaCaaTa3333AY.3.10.002814
ORF1ab/nsp3819T819IaCaaTa2929AY.50.000599
ORF1ab/nsp3819T819IaCaaTa2626B.1.5960.002266
ORF1ab/nsp3819T819IaCaaTa2626C.36.3.10.070652
ORF1ab/nsp3819T819IaCaaTa2222AY.1020.000583
ORF1ab/nsp3819T819IaCaaTa2020B.1.4700.02809
ORF1ab/nsp3819T819IaCaaTa1818B.1.4290.000424
ORF1ab/nsp3819T819IaCaaTa1717B.1.1.3170.006999
ORF1ab/nsp3819T819IaCaaTa1717B.1.177.180.019722
ORF1ab/nsp3819T819IaCaaTa1717B.1.3960.011997
ORF1ab/nsp3819T819IaCaaTa1717B.1.617.10.002192
ORF1ab/nsp3819T819IaCaaTa1616AY.290.000252
ORF1ab/nsp3819T819IaCaaTa1414AY.4.20.000304
ORF1ab/nsp3819T819IaCaaTa1313AY.700.002711
ORF1ab/nsp3819T819IaCaaTa1212AY.130.001932
ORF1ab/nsp3819T819IaCaaTa1111AY.980.000869
ORF1ab/nsp3819T819IaCaaTa1111B.1.1.5190.000437
ORF1ab/nsp3819T819IaCaaTa1010AY.390.000247
ORF1ab/nsp3819T819IaCaaTa1010B.1.3510.000297
ORF1ab/nsp3819T819IaCaaTa99AY.540.000858
ORF1ab/nsp3819T819IaCaaTa99B.1.258.240.096774
ORF1ab/nsp3819T819IaCaaTa99B.1.4270.000454
ORF1ab/nsp3819T819IaCaaTa88AY.470.000249
ORF1ab/nsp3819T819IaCaaTa88B.1.1.710.048485
ORF1ab/nsp3819T819IaCaaTa77AY.1190.000247
ORF1ab/nsp3819T819IaCaaTa77B.1.214.20.004197
ORF1ab/nsp3819T819IaCaaTa77B.4.10.132075
ORF1ab/nsp3819T819IaCaaTa66AD.20.001314
ORF1ab/nsp3819T819IaCaaTa66AY.16.10.00282
ORF1ab/nsp3819T819IaCaaTa66AY.60.000247
ORF1ab/nsp3819T819IaCaaTa66B.1.2360.01232
ORF1ab/nsp3819T819IaCaaTa66B.1.2430.000418
ORF1ab/nsp3819T819IaCaaTa66B.1.3460.007864
ORF1ab/nsp3819T819IaCaaTa55AY.1000.00023
ORF1ab/nsp3819T819IaCaaTa55AY.1170.000423
ORF1ab/nsp3819T819IaCaaTa55AY.1200.000186
ORF1ab/nsp3819T819IaCaaTa55AY.39.10.000198
ORF1ab/nsp3819T819IaCaaTa55B.1.1.10.001633
ORF1ab/nsp3819T819IaCaaTa55B.1.177.810.000947
ORF1ab/nsp3819T819IaCaaTa55B.1.360.00073
ORF1ab/nsp3819T819IaCaaTa55B.1.5250.000566
ORF1ab/nsp3819T819IaCaaTa55B.1.5260.000118
ORF1ab/nsp3819T819IaCaaTa55B.1.6340.017123
ORF1ab/nsp3819T819IaCaaTa44AY.160.001519
ORF1ab/nsp3819T819IaCaaTa44AY.320.00213
ORF1ab/nsp3819T819IaCaaTa44AY.380.001997
ORF1ab/nsp3819T819IaCaaTa44AY.4.50.00043
ORF1ab/nsp3819T819IaCaaTa44AZ.20.003284
ORF1ab/nsp3819T819IaCaaTa44B0.000511
ORF1ab/nsp3819T819IaCaaTa44B.1.1.3050.015444
ORF1ab/nsp3819T819IaCaaTa44B.1.1.370.000771
ORF1ab/nsp3819T819IaCaaTa44B.1.177.40.000844
ORF1ab/nsp3819T819IaCaaTa44B.1.177.530.009569
ORF1ab/nsp3819T819IaCaaTa44B.1.177.860.000734
ORF1ab/nsp3819T819IaCaaTa44B.1.438.10.000429
ORF1ab/nsp3819T819IaCaaTa44B.1.5030.00995
ORF1ab/nsp3819T819IaCaaTa44B.1.6090.001918
ORF1ab/nsp3819T819IaCaaTa44C.370.000464
ORF1ab/nsp3819T819IaCaaTa44D.20.0003
ORF1ab/nsp3819T819IaCaaTa44P.1.40.003906
ORF1ab/nsp3819T819IaCaaTa33A0.001161
ORF1ab/nsp3819T819IaCaaTa33AY.260.000085
ORF1ab/nsp3819T819IaCaaTa33AY.340.000291
ORF1ab/nsp3819T819IaCaaTa33AY.450.000365
ORF1ab/nsp3819T819IaCaaTa33AY.80.001818
ORF1ab/nsp3819T819IaCaaTa33AY.9.10.000251
ORF1ab/nsp3819T819IaCaaTa33B.1.1.2140.000166
ORF1ab/nsp3819T819IaCaaTa33B.1.1.2430.012245
ORF1ab/nsp3819T819IaCaaTa33B.1.1.3290.011538
ORF1ab/nsp3819T819IaCaaTa33B.1.1.330.001263
ORF1ab/nsp3819T819IaCaaTa33B.1.1.390.001529
ORF1ab/nsp3819T819IaCaaTa33B.1.1.630.001157
ORF1ab/nsp3819T819IaCaaTa33B.1.1050.028846
ORF1ab/nsp3819T819IaCaaTa33B.1.2400.000647
ORF1ab/nsp3819T819IaCaaTa33B.1.3670.002377
ORF1ab/nsp3819T819IaCaaTa33B.1.5760.00272
ORF1ab/nsp3819T819IaCaaTa33B.1.6370.000219
ORF1ab/nsp3819T819IaCaaTa33B.1.910.006224
ORF1ab/nsp3819T819IaCaaTa33P.1.140.000143
ORF1ab/nsp3819T819IaCaaTa33P.1.150.000697
ORF1ab/nsp3819T819IaCaaTa33Q.30.000435
ORF1ab/nsp3819T819IaCaaTa22AY.1130.000285
ORF1ab/nsp3819T819IaCaaTa22AY.1160.000574
ORF1ab/nsp3819T819IaCaaTa22AY.230.000139
ORF1ab/nsp3819T819IaCaaTa22AY.360.000296
ORF1ab/nsp3819T819IaCaaTa22AY.370.000632
ORF1ab/nsp3819T819IaCaaTa22AY.420.00008
ORF1ab/nsp3819T819IaCaaTa22AY.550.001835
ORF1ab/nsp3819T819IaCaaTa22AY.680.000547
ORF1ab/nsp3819T819IaCaaTa22AY.9.20.000073
ORF1ab/nsp3819T819IaCaaTa22AY.99.20.000184
ORF1ab/nsp3819T819IaCaaTa22B.1.1.1290.018349
ORF1ab/nsp3819T819IaCaaTa22B.1.1.250.001137
ORF1ab/nsp3819T819IaCaaTa22B.1.1.2940.002532
ORF1ab/nsp3819T819IaCaaTa22B.1.1.700.000682
ORF1ab/nsp3819T819IaCaaTa22B.1.177.560.001335
ORF1ab/nsp3819T819IaCaaTa22B.1.177.770.001452
ORF1ab/nsp3819T819IaCaaTa22B.1.466.20.000782
ORF1ab/nsp3819T819IaCaaTa22B.1.5090.001732
ORF1ab/nsp3819T819IaCaaTa22B.1.5170.000854
ORF1ab/nsp3819T819IaCaaTa22B.1.5600.009259
ORF1ab/nsp3819T819IaCaaTa22B.1.5610.000794
ORF1ab/nsp3819T819IaCaaTa22B.1.5640.000852
ORF1ab/nsp3819T819IaCaaTa22B.1.5700.005882
ORF1ab/nsp3819T819IaCaaTa22B.1.5710.019417
ORF1ab/nsp3819T819IaCaaTa22B.1.5820.000981
ORF1ab/nsp3819T819IaCaaTa22C.10.004785
ORF1ab/nsp3819T819IaCaaTa22P.1.10.000635
ORF1ab/nsp3819T819IaCaaTa22P.20.000373
ORF1ab/nsp3819T819IaCaaTa22Q.80.00033
ORF1ab/nsp3819T819IaCaaTa11A.20.000662
ORF1ab/nsp3819T819IaCaaTa11A.2.50.000499
ORF1ab/nsp3819T819IaCaaTa11A.30.002096
ORF1ab/nsp3819T819IaCaaTa11AH.30.003802
ORF1ab/nsp3819T819IaCaaTa11AW.10.003049
ORF1ab/nsp3819T819IaCaaTa11AY.1070.000466
ORF1ab/nsp3819T819IaCaaTa11AY.1100.000113
ORF1ab/nsp3819T819IaCaaTa11AY.1110.000183
ORF1ab/nsp3819T819IaCaaTa11AY.120.000316
ORF1ab/nsp3819T819IaCaaTa11AY.1210.000135
ORF1ab/nsp3819T819IaCaaTa11AY.190.00114
ORF1ab/nsp3819T819IaCaaTa11AY.29.10.000221
ORF1ab/nsp3819T819IaCaaTa11AY.34.10.00051
ORF1ab/nsp3819T819IaCaaTa11AY.460.000104
ORF1ab/nsp3819T819IaCaaTa11AY.46.10.001027
ORF1ab/nsp3819T819IaCaaTa11AY.5.30.000337
ORF1ab/nsp3819T819IaCaaTa11AY.610.000105
ORF1ab/nsp3819T819IaCaaTa11AY.670.000464
ORF1ab/nsp3819T819IaCaaTa11AY.690.000187
ORF1ab/nsp3819T819IaCaaTa11AY.750.000056
ORF1ab/nsp3819T819IaCaaTa11AY.90.000068
ORF1ab/nsp3819T819IaCaaTa11AZ.10.000867
ORF1ab/nsp3819T819IaCaaTa11B.1.1.100.001115
ORF1ab/nsp3819T819IaCaaTa11B.1.1.1700.001247
ORF1ab/nsp3819T819IaCaaTa11B.1.1.1820.090909
ORF1ab/nsp3819T819IaCaaTa11B.1.1.1960.005714
ORF1ab/nsp3819T819IaCaaTa11B.1.1.2160.00089
ORF1ab/nsp3819T819IaCaaTa11B.1.1.2580.003257
ORF1ab/nsp3819T819IaCaaTa11B.1.1.280.000311
ORF1ab/nsp3819T819IaCaaTa11B.1.1.2840.000107
ORF1ab/nsp3819T819IaCaaTa11B.1.1.3180.000302
ORF1ab/nsp3819T819IaCaaTa11B.1.1.3220.008772
ORF1ab/nsp3819T819IaCaaTa11B.1.1.3720.000689
ORF1ab/nsp3819T819IaCaaTa11B.1.1.4020.011111
ORF1ab/nsp3819T819IaCaaTa11B.1.1.4320.001266
ORF1ab/nsp3819T819IaCaaTa11B.1.1.4340.000349
ORF1ab/nsp3819T819IaCaaTa11B.1.1.500.000679
ORF1ab/nsp3819T819IaCaaTa11B.1.110.30.000718
ORF1ab/nsp3819T819IaCaaTa11B.1.1110.001175
ORF1ab/nsp3819T819IaCaaTa11B.1.120.008
ORF1ab/nsp3819T819IaCaaTa11B.1.130.002375
ORF1ab/nsp3819T819IaCaaTa11B.1.160.300.002976
ORF1ab/nsp3819T819IaCaaTa11B.1.177.310.011494
ORF1ab/nsp3819T819IaCaaTa11B.1.177.440.000519
ORF1ab/nsp3819T819IaCaaTa11B.1.177.70.000165
ORF1ab/nsp3819T819IaCaaTa11B.1.2060.000816
ORF1ab/nsp3819T819IaCaaTa11B.1.2120.016667
ORF1ab/nsp3819T819IaCaaTa11B.1.2210.000071
ORF1ab/nsp3819T819IaCaaTa11B.1.258.120.007874
ORF1ab/nsp3819T819IaCaaTa11B.1.2650.001271
ORF1ab/nsp3819T819IaCaaTa11B.1.2980.002114
ORF1ab/nsp3819T819IaCaaTa11B.1.3110.000275
ORF1ab/nsp3819T819IaCaaTa11B.1.3240.001605
ORF1ab/nsp3819T819IaCaaTa11B.1.36.10.00114
ORF1ab/nsp3819T819IaCaaTa11B.1.36.190.009259
ORF1ab/nsp3819T819IaCaaTa11B.1.36.220.001208
ORF1ab/nsp3819T819IaCaaTa11B.1.36.80.001
ORF1ab/nsp3819T819IaCaaTa11B.1.3750.00082
ORF1ab/nsp3819T819IaCaaTa11B.1.3770.004566
ORF1ab/nsp3819T819IaCaaTa11B.1.4090.000781
ORF1ab/nsp3819T819IaCaaTa11B.1.4360.001029
ORF1ab/nsp3819T819IaCaaTa11B.1.4690.00361
ORF1ab/nsp3819T819IaCaaTa11B.1.5440.006024
ORF1ab/nsp3819T819IaCaaTa11B.1.5750.000303
ORF1ab/nsp3819T819IaCaaTa11B.1.595.10.005848
ORF1ab/nsp3819T819IaCaaTa11B.1.60.017241
ORF1ab/nsp3819T819IaCaaTa11B.1.6190.000871
ORF1ab/nsp3819T819IaCaaTa11B.1.6210.000089
ORF1ab/nsp3819T819IaCaaTa11B.1.621.10.000506
ORF1ab/nsp3819T819IaCaaTa11B.1.6230.000536
ORF1ab/nsp3819T819IaCaaTa11B.1.940.027027
ORF1ab/nsp3819T819IaCaaTa11B.110.005128
ORF1ab/nsp3819T819IaCaaTa11B.230.002924
ORF1ab/nsp3819T819IaCaaTa11B.550.00295
ORF1ab/nsp3819T819IaCaaTa11B.6.80.008264
ORF1ab/nsp3819T819IaCaaTa11C.350.000774
ORF1ab/nsp3819T819IaCaaTa11P.30.001595
ORF1ab/nsp3819T819IaCaaTa11Q.40.000455
ORF1ab/nsp3819T819IaCaaTa11W.10.008696