CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp3 | 819 | T819I | T1637I | nonsyn | aCa | aTa | 7254 | 7253 | 0.999862 | 5174-5176 |
ORF1ab/nsp3 | 819 | T819I | T1637I | nonsyn | aCA | aTC | 7254 | 1 | 0.000137855 | 5174-5176 |
Details of the mutation T819I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 7253 | 7254 | All | 0.001387 |
ORF1ab/nsp3 | 819 | T819I | aCA | aTC | 1 | 7254 | All | 0 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 3527 | 3527 | B.1.258.17 | 0.366708 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 844 | 844 | B.1.1.7 | 0.000756 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 322 | 322 | B.1.1.255 | 0.975758 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 312 | 312 | AY.4 | 0.000486 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 174 | 174 | C.1.2 | 0.740426 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 114 | 114 | B.1.36.18 | 0.047899 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 107 | 107 | B.1.617.2 | 0.000403 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 98 | 98 | AY.25 | 0.000589 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 97 | 97 | B.1 | 0.000888 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 91 | 91 | B.1.177.78 | 0.883495 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 71 | 71 | B.1.2 | 0.000625 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 69 | 69 | B.1.160.20 | 0.616071 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 68 | 68 | B.1.258 | 0.004525 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 61 | 61 | AY.20 | 0.002371 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 61 | 61 | B.1.160 | 0.001902 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 60 | 60 | B.1.177 | 0.00079 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 58 | 58 | P.5 | 0.794521 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 55 | 55 | AY.103 | 0.000341 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 55 | 55 | AY.33 | 0.003673 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 48 | 49 | AY.43 | 0.000213 |
ORF1ab/nsp3 | 819 | T819I | aCA | aTC | 1 | 49 | AY.43 | 0.000004 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 44 | 44 | AY.116.1 | 0.013703 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 43 | 43 | P.1 | 0.000677 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 40 | 40 | B.1.1 | 0.000726 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 39 | 39 | AY.3 | 0.000388 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 38 | 38 | AY.44 | 0.000231 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 33 | 33 | AY.3.1 | 0.002814 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 29 | 29 | AY.5 | 0.000599 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 26 | 26 | B.1.596 | 0.002266 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 26 | 26 | C.36.3.1 | 0.070652 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 22 | 22 | AY.102 | 0.000583 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 20 | 20 | B.1.470 | 0.02809 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 18 | 18 | B.1.429 | 0.000424 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 17 | 17 | B.1.1.317 | 0.006999 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 17 | 17 | B.1.177.18 | 0.019722 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 17 | 17 | B.1.396 | 0.011997 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 17 | 17 | B.1.617.1 | 0.002192 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 16 | 16 | AY.29 | 0.000252 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 14 | 14 | AY.4.2 | 0.000304 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 13 | 13 | AY.70 | 0.002711 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 12 | 12 | AY.13 | 0.001932 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 11 | 11 | AY.98 | 0.000869 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 11 | 11 | B.1.1.519 | 0.000437 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 10 | 10 | AY.39 | 0.000247 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 10 | 10 | B.1.351 | 0.000297 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 9 | 9 | AY.54 | 0.000858 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 9 | 9 | B.1.258.24 | 0.096774 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 9 | 9 | B.1.427 | 0.000454 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 8 | 8 | AY.47 | 0.000249 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 8 | 8 | B.1.1.71 | 0.048485 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 7 | 7 | AY.119 | 0.000247 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 7 | 7 | B.1.214.2 | 0.004197 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 7 | 7 | B.4.1 | 0.132075 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 6 | 6 | AD.2 | 0.001314 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 6 | 6 | AY.16.1 | 0.00282 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 6 | 6 | AY.6 | 0.000247 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 6 | 6 | B.1.236 | 0.01232 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 6 | 6 | B.1.243 | 0.000418 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 6 | 6 | B.1.346 | 0.007864 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 5 | 5 | AY.100 | 0.00023 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 5 | 5 | AY.117 | 0.000423 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 5 | 5 | AY.120 | 0.000186 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 5 | 5 | AY.39.1 | 0.000198 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 5 | 5 | B.1.1.1 | 0.001633 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 5 | 5 | B.1.177.81 | 0.000947 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 5 | 5 | B.1.36 | 0.00073 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 5 | 5 | B.1.525 | 0.000566 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 5 | 5 | B.1.526 | 0.000118 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 5 | 5 | B.1.634 | 0.017123 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 4 | 4 | AY.16 | 0.001519 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 4 | 4 | AY.32 | 0.00213 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 4 | 4 | AY.38 | 0.001997 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 4 | 4 | AY.4.5 | 0.00043 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 4 | 4 | AZ.2 | 0.003284 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 4 | 4 | B | 0.000511 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 4 | 4 | B.1.1.305 | 0.015444 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 4 | 4 | B.1.1.37 | 0.000771 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 4 | 4 | B.1.177.4 | 0.000844 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 4 | 4 | B.1.177.53 | 0.009569 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 4 | 4 | B.1.177.86 | 0.000734 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 4 | 4 | B.1.438.1 | 0.000429 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 4 | 4 | B.1.503 | 0.00995 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 4 | 4 | B.1.609 | 0.001918 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 4 | 4 | C.37 | 0.000464 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 4 | 4 | D.2 | 0.0003 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 4 | 4 | P.1.4 | 0.003906 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 3 | 3 | A | 0.001161 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 3 | 3 | AY.26 | 0.000085 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 3 | 3 | AY.34 | 0.000291 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 3 | 3 | AY.45 | 0.000365 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 3 | 3 | AY.8 | 0.001818 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 3 | 3 | AY.9.1 | 0.000251 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 3 | 3 | B.1.1.214 | 0.000166 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 3 | 3 | B.1.1.243 | 0.012245 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 3 | 3 | B.1.1.329 | 0.011538 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 3 | 3 | B.1.1.33 | 0.001263 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 3 | 3 | B.1.1.39 | 0.001529 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 3 | 3 | B.1.1.63 | 0.001157 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 3 | 3 | B.1.105 | 0.028846 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 3 | 3 | B.1.240 | 0.000647 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 3 | 3 | B.1.367 | 0.002377 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 3 | 3 | B.1.576 | 0.00272 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 3 | 3 | B.1.637 | 0.000219 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 3 | 3 | B.1.91 | 0.006224 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 3 | 3 | P.1.14 | 0.000143 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 3 | 3 | P.1.15 | 0.000697 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 3 | 3 | Q.3 | 0.000435 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 2 | 2 | AY.113 | 0.000285 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 2 | 2 | AY.116 | 0.000574 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 2 | 2 | AY.23 | 0.000139 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 2 | 2 | AY.36 | 0.000296 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 2 | 2 | AY.37 | 0.000632 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 2 | 2 | AY.42 | 0.00008 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 2 | 2 | AY.55 | 0.001835 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 2 | 2 | AY.68 | 0.000547 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 2 | 2 | AY.9.2 | 0.000073 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 2 | 2 | AY.99.2 | 0.000184 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 2 | 2 | B.1.1.129 | 0.018349 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 2 | 2 | B.1.1.25 | 0.001137 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 2 | 2 | B.1.1.294 | 0.002532 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 2 | 2 | B.1.1.70 | 0.000682 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 2 | 2 | B.1.177.56 | 0.001335 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 2 | 2 | B.1.177.77 | 0.001452 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 2 | 2 | B.1.466.2 | 0.000782 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 2 | 2 | B.1.509 | 0.001732 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 2 | 2 | B.1.517 | 0.000854 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 2 | 2 | B.1.560 | 0.009259 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 2 | 2 | B.1.561 | 0.000794 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 2 | 2 | B.1.564 | 0.000852 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 2 | 2 | B.1.570 | 0.005882 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 2 | 2 | B.1.571 | 0.019417 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 2 | 2 | B.1.582 | 0.000981 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 2 | 2 | C.1 | 0.004785 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 2 | 2 | P.1.1 | 0.000635 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 2 | 2 | P.2 | 0.000373 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 2 | 2 | Q.8 | 0.00033 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | A.2 | 0.000662 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | A.2.5 | 0.000499 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | A.3 | 0.002096 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | AH.3 | 0.003802 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | AW.1 | 0.003049 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | AY.107 | 0.000466 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | AY.111 | 0.000183 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | AY.12 | 0.000316 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | AY.121 | 0.000135 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | AY.19 | 0.00114 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | AY.29.1 | 0.000221 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | AY.34.1 | 0.00051 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | AY.46.1 | 0.001027 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | AY.5.3 | 0.000337 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | AY.61 | 0.000105 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | AY.67 | 0.000464 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | AY.69 | 0.000187 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | AY.9 | 0.000068 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | AZ.1 | 0.000867 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.1.10 | 0.001115 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.1.170 | 0.001247 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.1.182 | 0.090909 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.1.196 | 0.005714 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.1.216 | 0.00089 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.1.258 | 0.003257 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.1.28 | 0.000311 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.1.284 | 0.000107 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.1.318 | 0.000302 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.1.322 | 0.008772 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.1.372 | 0.000689 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.1.402 | 0.011111 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.1.432 | 0.001266 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.1.434 | 0.000349 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.1.50 | 0.000679 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.110.3 | 0.000718 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.111 | 0.001175 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.12 | 0.008 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.13 | 0.002375 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.160.30 | 0.002976 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.177.31 | 0.011494 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.177.44 | 0.000519 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.206 | 0.000816 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.212 | 0.016667 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.258.12 | 0.007874 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.265 | 0.001271 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.298 | 0.002114 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.311 | 0.000275 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.324 | 0.001605 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.36.1 | 0.00114 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.36.19 | 0.009259 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.36.22 | 0.001208 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.36.8 | 0.001 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.375 | 0.00082 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.377 | 0.004566 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.409 | 0.000781 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.436 | 0.001029 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.469 | 0.00361 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.544 | 0.006024 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.575 | 0.000303 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.595.1 | 0.005848 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.6 | 0.017241 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.619 | 0.000871 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.621.1 | 0.000506 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.623 | 0.000536 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.1.94 | 0.027027 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.11 | 0.005128 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.23 | 0.002924 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.55 | 0.00295 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | B.6.8 | 0.008264 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | C.35 | 0.000774 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | P.3 | 0.001595 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | Q.4 | 0.000455 |
ORF1ab/nsp3 | 819 | T819I | aCa | aTa | 1 | 1 | W.1 | 0.008696 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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