CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T749T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3749T749TT1567TsynacTacC2732660.9743594964-4966
ORF1ab/nsp3749T749TT1567TsynacTacA27360.0219784964-4966
ORF1ab/nsp3749T749TT1567TsynacTacG27310.0036634964-4966

Details of the mutation T749T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3749T749TacTacC266273All0.000051
ORF1ab/nsp3749T749TacTacA6273All0.000001
ORF1ab/nsp3749T749TacTacG1273All0
ORF1ab/nsp3749T749TacTacC130130AY.430.000576
ORF1ab/nsp3749T749TacTacC6868AY.4.20.001475
ORF1ab/nsp3749T749TacTacC2324B.1.1.70.000021
ORF1ab/nsp3749T749TacTacA124B.1.1.70.000001
ORF1ab/nsp3749T749TacTacC78AY.40.000011
ORF1ab/nsp3749T749TacTacG18AY.40.000002
ORF1ab/nsp3749T749TacTacA350.166667
ORF1ab/nsp3749T749TacTacC250.111111
ORF1ab/nsp3749T749TacTacC44AY.420.000161
ORF1ab/nsp3749T749TacTacC44B.1.1.5190.000159
ORF1ab/nsp3749T749TacTacC33AY.250.000018
ORF1ab/nsp3749T749TacTacC33B.1.4290.000071
ORF1ab/nsp3749T749TacTacC22AY.200.000078
ORF1ab/nsp3749T749TacTacC22AY.440.000012
ORF1ab/nsp3749T749TacTacC12B.1.10.000018
ORF1ab/nsp3749T749TacTacA12B.1.10.000018
ORF1ab/nsp3749T749TacTacC22B.1.20.000018
ORF1ab/nsp3749T749TacTacC22B.1.5260.000047
ORF1ab/nsp3749T749TacTacC11AY.1060.000335
ORF1ab/nsp3749T749TacTacC11AY.1200.000037
ORF1ab/nsp3749T749TacTacC11AY.290.000016
ORF1ab/nsp3749T749TacTacC11AY.46.40.000165
ORF1ab/nsp3749T749TacTacC11AY.90.000068
ORF1ab/nsp3749T749TacTacC11AY.9.20.000037
ORF1ab/nsp3749T749TacTacC11B.1.1.3620.005618
ORF1ab/nsp3749T749TacTacC11B.1.1420.002899
ORF1ab/nsp3749T749TacTacC11B.1.2210.000071
ORF1ab/nsp3749T749TacTacC11B.1.4040.001302
ORF1ab/nsp3749T749TacTacC11B.1.5410.004425
ORF1ab/nsp3749T749TacTacC11B.1.6210.000089
ORF1ab/nsp3749T749TacTacA11B.400.000364
ORF1ab/nsp3749T749TacTacC11D.20.000075