CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T749S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3749T749ST1567SnonsynActTct950.5555564964-4966
ORF1ab/nsp3749T749ST1567SnonsynAcTTcC920.2222224964-4966
ORF1ab/nsp3749T749ST1567SnonsynaCtaGt910.1111114964-4966
ORF1ab/nsp3749T749ST1567SnonsynAcTTcA910.1111114964-4966

Details of the mutation T749S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3749T749SActTct59All0.000001
ORF1ab/nsp3749T749SAcTTcC29All0
ORF1ab/nsp3749T749SaCtaGt19All0
ORF1ab/nsp3749T749SAcTTcA19All0
ORF1ab/nsp3749T749SActTct240.111111
ORF1ab/nsp3749T749SAcTTcC140.055556
ORF1ab/nsp3749T749SAcTTcA140.055556
ORF1ab/nsp3749T749SaCtaGt11AY.440.000006
ORF1ab/nsp3749T749SActTct11B.10.000009
ORF1ab/nsp3749T749SActTct11B.1.10.000018
ORF1ab/nsp3749T749SAcTTcC11B.1.1.70.000001
ORF1ab/nsp3749T749SActTct11D.20.000075