CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T749A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3749T749AT1567AnonsynActGct990599030.9997984964-4966
ORF1ab/nsp3749T749AT1567AnonsynAcTGcA990510.0001009594964-4966
ORF1ab/nsp3749T749AT1567AnonsynAcTGcC990510.0001009594964-4966

Details of the mutation T749A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3749T749AActGct99039905All0.001894
ORF1ab/nsp3749T749AAcTGcA19905All0
ORF1ab/nsp3749T749AAcTGcC19905All0
ORF1ab/nsp3749T749AActGct77267726B.1.1.70.006916
ORF1ab/nsp3749T749AActGct20732073Q.40.942701
ORF1ab/nsp3749T749AActGct4040Q.80.006596
ORF1ab/nsp3749T749AActGct2929B.1.10.000526
ORF1ab/nsp3749T749AActGct55AY.40.000008
ORF1ab/nsp3749T749AActGct33AY.440.000018
ORF1ab/nsp3749T749AActGct33B.1.617.20.000011
ORF1ab/nsp3749T749AActGct120.055556
ORF1ab/nsp3749T749AAcTGcA120.055556
ORF1ab/nsp3749T749AActGct22AY.1020.000053
ORF1ab/nsp3749T749AActGct22B.10.000018
ORF1ab/nsp3749T749AAcTGcC12B.1.2210.000071
ORF1ab/nsp3749T749AActGct12B.1.2210.000071
ORF1ab/nsp3749T749AActGct11AY.1000.000046
ORF1ab/nsp3749T749AActGct11AY.1050.000643
ORF1ab/nsp3749T749AActGct11AY.1170.000085
ORF1ab/nsp3749T749AActGct11AY.330.000067
ORF1ab/nsp3749T749AActGct11AY.680.000274
ORF1ab/nsp3749T749AActGct11B0.000128
ORF1ab/nsp3749T749AActGct11B.1.1.2280.003049
ORF1ab/nsp3749T749AActGct11B.1.1.4090.002833
ORF1ab/nsp3749T749AActGct11B.1.1700.00431
ORF1ab/nsp3749T749AActGct11B.1.20.000009
ORF1ab/nsp3749T749AActGct11B.1.4970.000315
ORF1ab/nsp3749T749AActGct11B.1.5760.000907
ORF1ab/nsp3749T749AActGct11B.1.617.10.000129
ORF1ab/nsp3749T749AActGct11B.1.6230.000536
ORF1ab/nsp3749T749AActGct11B.3.10.001658
ORF1ab/nsp3749T749AActGct11C.370.000116
ORF1ab/nsp3749T749AActGct11P.10.000016
ORF1ab/nsp3749T749AActGct11Q.10.000126