CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T725T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3725T725TT1543TsynacAacG2211690.7647064892-4894
ORF1ab/nsp3725T725TT1543TsynacAacT221330.1493214892-4894
ORF1ab/nsp3725T725TT1543TsynacAacC221190.08597294892-4894

Details of the mutation T725T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3725T725TacAacG169221All0.000032
ORF1ab/nsp3725T725TacAacT33221All0.000006
ORF1ab/nsp3725T725TacAacC19221All0.000004
ORF1ab/nsp3725T725TacAacG4358B.1.1.70.000038
ORF1ab/nsp3725T725TacAacT1558B.1.1.70.000013
ORF1ab/nsp3725T725TacAacG1616B.1.4290.000376
ORF1ab/nsp3725T725TacAacG1313P.10.000205
ORF1ab/nsp3725T725TacAacC812B.1.20.00007
ORF1ab/nsp3725T725TacAacT212B.1.20.000018
ORF1ab/nsp3725T725TacAacG212B.1.20.000018
ORF1ab/nsp3725T725TacAacG1010B.1.1.1760.004394
ORF1ab/nsp3725T725TacAacG1010B.1.1.5190.000397
ORF1ab/nsp3725T725TacAacG88AY.1190.000282
ORF1ab/nsp3725T725TacAacG77AY.430.000031
ORF1ab/nsp3725T725TacAacC57B.1.10.000091
ORF1ab/nsp3725T725TacAacG27B.1.10.000036
ORF1ab/nsp3725T725TacAacG46AY.30.00004
ORF1ab/nsp3725T725TacAacC16AY.30.00001
ORF1ab/nsp3725T725TacAacT16AY.30.00001
ORF1ab/nsp3725T725TacAacG36AY.40.000005
ORF1ab/nsp3725T725TacAacT26AY.40.000003
ORF1ab/nsp3725T725TacAacC16AY.40.000002
ORF1ab/nsp3725T725TacAacG66B.1.1770.000079
ORF1ab/nsp3725T725TacAacG35B.1.617.20.000011
ORF1ab/nsp3725T725TacAacT25B.1.617.20.000008
ORF1ab/nsp3725T725TacAacG240.111111
ORF1ab/nsp3725T725TacAacT240.111111
ORF1ab/nsp3725T725TacAacT24AY.290.000032
ORF1ab/nsp3725T725TacAacG24AY.290.000032
ORF1ab/nsp3725T725TacAacG24AY.440.000012
ORF1ab/nsp3725T725TacAacT14AY.440.000006
ORF1ab/nsp3725T725TacAacC14AY.440.000006
ORF1ab/nsp3725T725TacAacG44B.10.000037
ORF1ab/nsp3725T725TacAacC23AY.1030.000012
ORF1ab/nsp3725T725TacAacG13AY.1030.000006
ORF1ab/nsp3725T725TacAacG33AY.200.000117
ORF1ab/nsp3725T725TacAacG33B.1.1.280.000934
ORF1ab/nsp3725T725TacAacG22AY.50.000041
ORF1ab/nsp3725T725TacAacG22B.1.1.2030.033898
ORF1ab/nsp3725T725TacAacG22B.1.2210.000142
ORF1ab/nsp3725T725TacAacT22B.1.3060.011429
ORF1ab/nsp3725T725TacAacG22B.1.360.000292
ORF1ab/nsp3725T725TacAacG22B.1.6370.000146
ORF1ab/nsp3725T725TacAacG11AY.1020.000027
ORF1ab/nsp3725T725TacAacG11AY.140.000088
ORF1ab/nsp3725T725TacAacG11AY.20.000356
ORF1ab/nsp3725T725TacAacG11AY.230.00007
ORF1ab/nsp3725T725TacAacT11AY.250.000006
ORF1ab/nsp3725T725TacAacT11AY.260.000028
ORF1ab/nsp3725T725TacAacG11AY.330.000067
ORF1ab/nsp3725T725TacAacG11AY.340.000097
ORF1ab/nsp3725T725TacAacC11AY.39.10.00004
ORF1ab/nsp3725T725TacAacG11AY.690.000187
ORF1ab/nsp3725T725TacAacG11AY.750.000056
ORF1ab/nsp3725T725TacAacG11AY.99.20.000092
ORF1ab/nsp3725T725TacAacG11B.1.1.2220.000204
ORF1ab/nsp3725T725TacAacT11B.1.1.2940.001266
ORF1ab/nsp3725T725TacAacG11B.1.1.630.000386
ORF1ab/nsp3725T725TacAacG11B.1.177.820.000477
ORF1ab/nsp3725T725TacAacG11B.1.2430.00007
ORF1ab/nsp3725T725TacAacG11B.1.2580.000067
ORF1ab/nsp3725T725TacAacT11D.20.000075
ORF1ab/nsp3725T725TacAacG11Q.80.000165