CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T724del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3724T724del1T1542del1delacCac-750.7142864889-4891
ORF1ab/nsp3724T724del1T1542del1delACC-TT710.1428574889-4891
ORF1ab/nsp3724T724del1T1542del1delaCca-c710.1428574889-4891

Details of the mutation T724del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3724T724del1acCac-57All0.000001
ORF1ab/nsp3724T724del1ACC-TT17All0
ORF1ab/nsp3724T724del1aCca-c17All0
ORF1ab/nsp3724T724del1acCac-33B.1.1.70.000003
ORF1ab/nsp3724T724del1acCac-11AY.1030.000006
ORF1ab/nsp3724T724del1acCac-11AY.440.000006
ORF1ab/nsp3724T724del1ACC-TT11B.1.10.000018
ORF1ab/nsp3724T724del1aCca-c11B.1.4000.000429