CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T724T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3724T724TT1542TsynacCacT21197211270.9966984889-4891
ORF1ab/nsp3724T724TT1542TsynacCacA21197660.003113654889-4891
ORF1ab/nsp3724T724TT1542TsynacCacG2119740.0001887064889-4891

Details of the mutation T724T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3724T724TacCacT2112721197All0.004041
ORF1ab/nsp3724T724TacCacA6621197All0.000013
ORF1ab/nsp3724T724TacCacG421197All0.000001
ORF1ab/nsp3724T724TacCacT89518955AY.40.013932
ORF1ab/nsp3724T724TacCacA48955AY.40.000006
ORF1ab/nsp3724T724TacCacT43974397AY.700.916806
ORF1ab/nsp3724T724TacCacT18931902B.1.1.70.001695
ORF1ab/nsp3724T724TacCacA91902B.1.1.70.000008
ORF1ab/nsp3724T724TacCacT14271427B.1.214.20.855516
ORF1ab/nsp3724T724TacCacT10051016B.1.617.20.003784
ORF1ab/nsp3724T724TacCacA111016B.1.617.20.000041
ORF1ab/nsp3724T724TacCacT392393AY.430.001737
ORF1ab/nsp3724T724TacCacA1393AY.430.000004
ORF1ab/nsp3724T724TacCacT289290AY.440.001759
ORF1ab/nsp3724T724TacCacA1290AY.440.000006
ORF1ab/nsp3724T724TacCacT231233AY.470.007185
ORF1ab/nsp3724T724TacCacA2233AY.470.000062
ORF1ab/nsp3724T724TacCacT212212B.1.1770.002792
ORF1ab/nsp3724T724TacCacT186188AY.250.001119
ORF1ab/nsp3724T724TacCacA2188AY.250.000012
ORF1ab/nsp3724T724TacCacT170177B.1.20.001497
ORF1ab/nsp3724T724TacCacA7177B.1.20.000062
ORF1ab/nsp3724T724TacCacT132141AY.1020.0035
ORF1ab/nsp3724T724TacCacA9141AY.1020.000239
ORF1ab/nsp3724T724TacCacT124129AY.1030.00077
ORF1ab/nsp3724T724TacCacA5129AY.1030.000031
ORF1ab/nsp3724T724TacCacT118118B.1.214.30.842857
ORF1ab/nsp3724T724TacCacT109109B.1.214.40.990909
ORF1ab/nsp3724T724TacCacT103105B.10.000943
ORF1ab/nsp3724T724TacCacA2105B.10.000018
ORF1ab/nsp3724T724TacCacT8484AY.4.20.001822
ORF1ab/nsp3724T724TacCacT5758P.10.000898
ORF1ab/nsp3724T724TacCacA158P.10.000016
ORF1ab/nsp3724T724TacCacT5757B.1.258.110.022592
ORF1ab/nsp3724T724TacCacT5353AY.30.000527
ORF1ab/nsp3724T724TacCacT4749AY.390.001161
ORF1ab/nsp3724T724TacCacA249AY.390.000049
ORF1ab/nsp3724T724TacCacT4849B.1.10.000871
ORF1ab/nsp3724T724TacCacA149B.1.10.000018
ORF1ab/nsp3724T724TacCacT4545B.1.6370.003288
ORF1ab/nsp3724T724TacCacT4041B.1.1600.001248
ORF1ab/nsp3724T724TacCacA141B.1.1600.000031
ORF1ab/nsp3724T724TacCacT3131AY.1170.00262
ORF1ab/nsp3724T724TacCacT2626Q.30.003771
ORF1ab/nsp3724T724TacCacT2323AY.260.000651
ORF1ab/nsp3724T724TacCacT2222B.1.1.630.008488
ORF1ab/nsp3724T724TacCacT2222B.1.6210.001947
ORF1ab/nsp3724T724TacCacT2121AY.50.000434
ORF1ab/nsp3724T724TacCacT2121B.1.1.4200.021127
ORF1ab/nsp3724T724TacCacT2121B.1.1.5190.000834
ORF1ab/nsp3724T724TacCacT2121B.1.5960.00183
ORF1ab/nsp3724T724TacCacT2020AY.98.10.000969
ORF1ab/nsp3724T724TacCacT1818B.1.2210.001279
ORF1ab/nsp3724T724TacCacT1616AY.290.000252
ORF1ab/nsp3724T724TacCacT1616B.1.2100.034115
ORF1ab/nsp3724T724TacCacT1515B.1.1.1890.022693
ORF1ab/nsp3724T724TacCacT1414AY.1200.000521
ORF1ab/nsp3724T724TacCacT1414AY.140.001232
ORF1ab/nsp3724T724TacCacT1313AY.1060.004354
ORF1ab/nsp3724T724TacCacT1313AY.420.000523
ORF1ab/nsp3724T724TacCacT1313B.1.4290.000306
ORF1ab/nsp3724T724TacCacT1313B.1.5260.000306
ORF1ab/nsp3724T724TacCacT1212B.1.36.80.012
ORF1ab/nsp3724T724TacCacT1112B.1.4270.000555
ORF1ab/nsp3724T724TacCacA112B.1.4270.00005
ORF1ab/nsp3724T724TacCacT1212P.1.160.004489
ORF1ab/nsp3724T724TacCacT1011AY.1190.000353
ORF1ab/nsp3724T724TacCacA111AY.1190.000035
ORF1ab/nsp3724T724TacCacT1111AY.46.60.000794
ORF1ab/nsp3724T724TacCacT1111AY.9.10.000921
ORF1ab/nsp3724T724TacCacT1010C.370.001161
ORF1ab/nsp3724T724TacCacT1010P.1.140.000478
ORF1ab/nsp3724T724TacCacT99AY.1000.000414
ORF1ab/nsp3724T724TacCacT99AY.330.000601
ORF1ab/nsp3724T724TacCacT99B.1.177.210.000688
ORF1ab/nsp3724T724TacCacT89B.1.3510.000238
ORF1ab/nsp3724T724TacCacA19B.1.3510.00003
ORF1ab/nsp3724T724TacCacT88AA.50.129032
ORF1ab/nsp3724T724TacCacT88AY.230.000558
ORF1ab/nsp3724T724TacCacT88AY.3.10.000682
ORF1ab/nsp3724T724TacCacT88AY.360.001186
ORF1ab/nsp3724T724TacCacT88AY.46.30.00747
ORF1ab/nsp3724T724TacCacT88B.1.2140.029304
ORF1ab/nsp3724T724TacCacT88B.1.2430.000557
ORF1ab/nsp3724T724TacCacT88B.1.36.310.014011
ORF1ab/nsp3724T724TacCacT77AY.750.000392
ORF1ab/nsp3724T724TacCacT77B.1.1.2140.000388
ORF1ab/nsp3724T724TacCacT77B.1.1.2220.001428
ORF1ab/nsp3724T724TacCacT77B.1.2190.066038
ORF1ab/nsp3724T724TacCacT77B.1.2580.000466
ORF1ab/nsp3724T724TacCacT77P.1.40.006836
ORF1ab/nsp3724T724TacCacT66AY.1180.000376
ORF1ab/nsp3724T724TacCacT66AY.1210.000812
ORF1ab/nsp3724T724TacCacT66AY.4.50.000645
ORF1ab/nsp3724T724TacCacT56AY.460.00052
ORF1ab/nsp3724T724TacCacA16AY.460.000104
ORF1ab/nsp3724T724TacCacT66B.1.177.460.00551
ORF1ab/nsp3724T724TacCacT66B.1.214.10.12
ORF1ab/nsp3724T724TacCacT66Q.10.000758
ORF1ab/nsp3724T724TacCacT55AY.200.000194
ORF1ab/nsp3724T724TacCacT55AY.4.40.002046
ORF1ab/nsp3724T724TacCacT55AY.450.000608
ORF1ab/nsp3724T724TacCacT55AY.5.40.001384
ORF1ab/nsp3724T724TacCacT55AY.540.000477
ORF1ab/nsp3724T724TacCacT55AY.680.001369
ORF1ab/nsp3724T724TacCacT55AY.920.001436
ORF1ab/nsp3724T724TacCacT55B.1.1.280.001556
ORF1ab/nsp3724T724TacCacT55B.1.1.3060.002192
ORF1ab/nsp3724T724TacCacT55B.1.1.4320.006329
ORF1ab/nsp3724T724TacCacT55B.1.4090.003906
ORF1ab/nsp3724T724TacCacT55B.1.5710.048544
ORF1ab/nsp3724T724TacCacT55P.1.150.001162
ORF1ab/nsp3724T724TacCacT55Q.80.000825
ORF1ab/nsp3724T724TacCacT44AY.320.00213
ORF1ab/nsp3724T724TacCacT44B.1.2400.000862
ORF1ab/nsp3724T724TacCacT44B.1.351.20.00121
ORF1ab/nsp3724T724TacCacT44B.1.360.000584
ORF1ab/nsp3724T724TacCacT44C.230.023256
ORF1ab/nsp3724T724TacCacT34D.20.000225
ORF1ab/nsp3724T724TacCacG14D.20.000075
ORF1ab/nsp3724T724TacCacT44P.1.70.001277
ORF1ab/nsp3724T724TacCacT33AY.1090.002219
ORF1ab/nsp3724T724TacCacT33AY.160.001139
ORF1ab/nsp3724T724TacCacT33AY.240.001293
ORF1ab/nsp3724T724TacCacT33AY.340.000291
ORF1ab/nsp3724T724TacCacT33AY.46.20.001906
ORF1ab/nsp3724T724TacCacT33AY.740.000347
ORF1ab/nsp3724T724TacCacT33AY.75.10.000541
ORF1ab/nsp3724T724TacCacT33AY.930.000819
ORF1ab/nsp3724T724TacCacT33B0.000383
ORF1ab/nsp3724T724TacCacT33B.1.1.2160.002671
ORF1ab/nsp3724T724TacCacT33B.1.1.2940.003797
ORF1ab/nsp3724T724TacCacT33B.1.1.3330.003229
ORF1ab/nsp3724T724TacCacT33B.1.1.3480.002389
ORF1ab/nsp3724T724TacCacT33B.1.1.390.001529
ORF1ab/nsp3724T724TacCacT33B.1.1260.003827
ORF1ab/nsp3724T724TacCacT33B.1.177.730.001699
ORF1ab/nsp3724T724TacCacT33B.1.351.30.002629
ORF1ab/nsp3724T724TacCacT33B.1.36.10.003421
ORF1ab/nsp3724T724TacCacT33B.1.4330.009585
ORF1ab/nsp3724T724TacCacT33P.20.00056
ORF1ab/nsp3724T724TacCacT12A0.000387
ORF1ab/nsp3724T724TacCacG12A0.000387
ORF1ab/nsp3724T724TacCacT22A.2.50.000998
ORF1ab/nsp3724T724TacCacT12AY.1050.000643
ORF1ab/nsp3724T724TacCacA12AY.1050.000643
ORF1ab/nsp3724T724TacCacT22AY.1100.000225
ORF1ab/nsp3724T724TacCacT22AY.270.000129
ORF1ab/nsp3724T724TacCacT22AY.4.2.10.000298
ORF1ab/nsp3724T724TacCacT22AY.410.000588
ORF1ab/nsp3724T724TacCacT22AY.5.30.000675
ORF1ab/nsp3724T724TacCacT22AY.530.000575
ORF1ab/nsp3724T724TacCacT22AY.690.000373
ORF1ab/nsp3724T724TacCacT22AY.860.00166
ORF1ab/nsp3724T724TacCacT22B.1.1.10.000653
ORF1ab/nsp3724T724TacCacG22B.1.1.1920.004619
ORF1ab/nsp3724T724TacCacT22B.1.1.2840.000215
ORF1ab/nsp3724T724TacCacT22B.1.1.330.000842
ORF1ab/nsp3724T724TacCacT22B.1.1.4160.00181
ORF1ab/nsp3724T724TacCacT22B.1.1.5230.003125
ORF1ab/nsp3724T724TacCacT22B.1.1.700.000682
ORF1ab/nsp3724T724TacCacT22B.1.177.40.000422
ORF1ab/nsp3724T724TacCacT22B.1.258.140.001961
ORF1ab/nsp3724T724TacCacT22B.1.3110.000549
ORF1ab/nsp3724T724TacCacT22B.1.3200.002491
ORF1ab/nsp3724T724TacCacT22B.1.3480.036364
ORF1ab/nsp3724T724TacCacT22B.1.3890.002004
ORF1ab/nsp3724T724TacCacT22B.1.5640.000852
ORF1ab/nsp3724T724TacCacT22B.1.5740.004301
ORF1ab/nsp3724T724TacCacT22B.1.5770.001375
ORF1ab/nsp3724T724TacCacT22B.1.617.10.000258
ORF1ab/nsp3724T724TacCacT22B.1.6230.001073
ORF1ab/nsp3724T724TacCacA22B.1.6340.006849
ORF1ab/nsp3724T724TacCacT22P.1.10.000635
ORF1ab/nsp3724T724TacCacT22P.1.100.000539
ORF1ab/nsp3724T724TacCacT22R.10.00018
ORF1ab/nsp3724T724TacCacT11A.20.000662
ORF1ab/nsp3724T724TacCacT11A.23.10.000704
ORF1ab/nsp3724T724TacCacT11AY.10.000396
ORF1ab/nsp3724T724TacCacT11AY.100.00053
ORF1ab/nsp3724T724TacCacT11AY.1110.000183
ORF1ab/nsp3724T724TacCacT11AY.1140.000231
ORF1ab/nsp3724T724TacCacT11AY.1160.000287
ORF1ab/nsp3724T724TacCacT11AY.116.10.000311
ORF1ab/nsp3724T724TacCacT11AY.120.000316
ORF1ab/nsp3724T724TacCacT11AY.120.2.10.000498
ORF1ab/nsp3724T724TacCacT11AY.300.000396
ORF1ab/nsp3724T724TacCacT11AY.34.10.00051
ORF1ab/nsp3724T724TacCacT11AY.380.000499
ORF1ab/nsp3724T724TacCacT11AY.39.10.00004
ORF1ab/nsp3724T724TacCacT11AY.400.000964
ORF1ab/nsp3724T724TacCacT11AY.550.000917
ORF1ab/nsp3724T724TacCacT11AY.560.001605
ORF1ab/nsp3724T724TacCacT11AY.570.000656
ORF1ab/nsp3724T724TacCacT11AY.60.000041
ORF1ab/nsp3724T724TacCacT11AY.620.000436
ORF1ab/nsp3724T724TacCacT11AY.640.000595
ORF1ab/nsp3724T724TacCacT11AY.710.000475
ORF1ab/nsp3724T724TacCacT11AY.760.004831
ORF1ab/nsp3724T724TacCacT11AY.770.001127
ORF1ab/nsp3724T724TacCacT11AY.80.000606
ORF1ab/nsp3724T724TacCacT11AY.800.001129
ORF1ab/nsp3724T724TacCacT11AY.870.000833
ORF1ab/nsp3724T724TacCacT11AY.880.000884
ORF1ab/nsp3724T724TacCacT11AY.9.20.000037
ORF1ab/nsp3724T724TacCacT11AY.900.000684
ORF1ab/nsp3724T724TacCacT11AY.940.000443
ORF1ab/nsp3724T724TacCacT11AY.980.000079
ORF1ab/nsp3724T724TacCacT11AY.990.001049
ORF1ab/nsp3724T724TacCacT11AY.99.10.001553
ORF1ab/nsp3724T724TacCacT11AY.99.20.000092
ORF1ab/nsp3724T724TacCacT11B.1.1.1530.001095
ORF1ab/nsp3724T724TacCacT11B.1.1.1960.005714
ORF1ab/nsp3724T724TacCacT11B.1.1.2100.005714
ORF1ab/nsp3724T724TacCacT11B.1.1.2260.005814
ORF1ab/nsp3724T724TacCacT11B.1.1.2410.00207
ORF1ab/nsp3724T724TacCacT11B.1.1.270.00565
ORF1ab/nsp3724T724TacCacT11B.1.1.2970.002237
ORF1ab/nsp3724T724TacCacT11B.1.1.2980.000862
ORF1ab/nsp3724T724TacCacT11B.1.1.3260.001761
ORF1ab/nsp3724T724TacCacT11B.1.1.3390.010526
ORF1ab/nsp3724T724TacCacT11B.1.1.370.000193
ORF1ab/nsp3724T724TacCacT11B.1.1.3790.03125
ORF1ab/nsp3724T724TacCacT11B.1.1.5280.004808
ORF1ab/nsp3724T724TacCacT11B.1.1.980.018519
ORF1ab/nsp3724T724TacCacT11B.1.1040.00369
ORF1ab/nsp3724T724TacCacT11B.1.1390.000733
ORF1ab/nsp3724T724TacCacT11B.1.160.160.000929
ORF1ab/nsp3724T724TacCacT11B.1.177.120.000152
ORF1ab/nsp3724T724TacCacT11B.1.177.170.000821
ORF1ab/nsp3724T724TacCacT11B.1.177.240.001295
ORF1ab/nsp3724T724TacCacT11B.1.177.330.001645
ORF1ab/nsp3724T724TacCacT11B.1.177.350.000691
ORF1ab/nsp3724T724TacCacT11B.1.177.520.001757
ORF1ab/nsp3724T724TacCacA11B.1.177.560.000668
ORF1ab/nsp3724T724TacCacT11B.1.177.570.000281
ORF1ab/nsp3724T724TacCacT11B.1.177.600.000218
ORF1ab/nsp3724T724TacCacT11B.1.177.70.000165
ORF1ab/nsp3724T724TacCacT11B.1.177.750.001041
ORF1ab/nsp3724T724TacCacT11B.1.1920.009259
ORF1ab/nsp3724T724TacCacT11B.1.2010.005682
ORF1ab/nsp3724T724TacCacT11B.1.2060.000816
ORF1ab/nsp3724T724TacCacT11B.1.2370.004975
ORF1ab/nsp3724T724TacCacT11B.1.258.170.000104
ORF1ab/nsp3724T724TacCacT11B.1.264.10.047619
ORF1ab/nsp3724T724TacCacT11B.1.2790.000514
ORF1ab/nsp3724T724TacCacT11B.1.36.180.00042
ORF1ab/nsp3724T724TacCacT11B.1.36.290.000517
ORF1ab/nsp3724T724TacCacT11B.1.36.360.000602
ORF1ab/nsp3724T724TacCacT11B.1.3960.000706
ORF1ab/nsp3724T724TacCacT11B.1.4000.000429
ORF1ab/nsp3724T724TacCacT11B.1.4110.003704
ORF1ab/nsp3724T724TacCacT11B.1.4560.003268
ORF1ab/nsp3724T724TacCacT11B.1.4590.004082
ORF1ab/nsp3724T724TacCacT11B.1.466.20.000391
ORF1ab/nsp3724T724TacCacT11B.1.4700.001404
ORF1ab/nsp3724T724TacCacT11B.1.4740.001901
ORF1ab/nsp3724T724TacCacT11B.1.5170.000427
ORF1ab/nsp3724T724TacCacT11B.1.5250.000113
ORF1ab/nsp3724T724TacCacT11B.1.5270.003704
ORF1ab/nsp3724T724TacCacT11B.1.5370.02
ORF1ab/nsp3724T724TacCacT11B.1.5460.003704
ORF1ab/nsp3724T724TacCacT11B.1.5820.000491
ORF1ab/nsp3724T724TacCacT11B.1.6190.000871
ORF1ab/nsp3724T724TacCacT11B.30.000831
ORF1ab/nsp3724T724TacCacT11B.400.000364
ORF1ab/nsp3724T724TacCacT11C.1.20.004255
ORF1ab/nsp3724T724TacCacT11C.36.30.000567
ORF1ab/nsp3724T724TacCacT11N.10.016949
ORF1ab/nsp3724T724TacCacT11N.50.001767
ORF1ab/nsp3724T724TacCacT11N.90.005952
ORF1ab/nsp3724T724TacCacT11P.1.170.000162
ORF1ab/nsp3724T724TacCacT11P.1.20.001156
ORF1ab/nsp3724T724TacCacT11Q.40.000455
ORF1ab/nsp3724T724TacCacT11Y.10.012821