CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T724I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3724T724IT1542InonsynaCcaTc927692730.9996774889-4891
ORF1ab/nsp3724T724IT1542InonsynaCCaTT927630.0003234154889-4891

Details of the mutation T724I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3724T724IaCcaTc92739276All0.001774
ORF1ab/nsp3724T724IaCCaTT39276All0.000001
ORF1ab/nsp3724T724IaCcaTc24452445B.1.1.70.002189
ORF1ab/nsp3724T724IaCcaTc19541954AY.670.907149
ORF1ab/nsp3724T724IaCcaTc602602AY.1030.003738
ORF1ab/nsp3724T724IaCcaTc576576C.300.994819
ORF1ab/nsp3724T724IaCcaTc519519B.1.4290.012211
ORF1ab/nsp3724T724IaCcaTc510513AY.40.000794
ORF1ab/nsp3724T724IaCCaTT3513AY.40.000005
ORF1ab/nsp3724T724IaCcaTc275275AY.430.001218
ORF1ab/nsp3724T724IaCcaTc178178B.1.1.3180.053712
ORF1ab/nsp3724T724IaCcaTc161161B.1.351.20.048714
ORF1ab/nsp3724T724IaCcaTc149149C.30.11
ORF1ab/nsp3724T724IaCcaTc127127P.10.002001
ORF1ab/nsp3724T724IaCcaTc126126B.1.617.20.000474
ORF1ab/nsp3724T724IaCcaTc114114B.1.6100.404255
ORF1ab/nsp3724T724IaCcaTc113113AY.1020.002996
ORF1ab/nsp3724T724IaCcaTc113113B.1.20.000995
ORF1ab/nsp3724T724IaCcaTc6767AY.440.000408
ORF1ab/nsp3724T724IaCcaTc6666AY.250.000397
ORF1ab/nsp3724T724IaCcaTc6666B.1.10.001197
ORF1ab/nsp3724T724IaCcaTc6363B.1.3260.477273
ORF1ab/nsp3724T724IaCcaTc5252B.1.1.5190.002065
ORF1ab/nsp3724T724IaCcaTc5151B.10.000467
ORF1ab/nsp3724T724IaCcaTc5050B.1.1770.000658
ORF1ab/nsp3724T724IaCcaTc4343AY.200.001671
ORF1ab/nsp3724T724IaCcaTc3636AY.30.000358
ORF1ab/nsp3724T724IaCcaTc3333AZ.20.027094
ORF1ab/nsp3724T724IaCcaTc3030B.1.1.10.009801
ORF1ab/nsp3724T724IaCcaTc2626B.1.5250.002942
ORF1ab/nsp3724T724IaCcaTc2222B.1.3110.006041
ORF1ab/nsp3724T724IaCcaTc2121B.1.1.2220.004284
ORF1ab/nsp3724T724IaCcaTc2020P.1.70.006386
ORF1ab/nsp3724T724IaCcaTc1818AY.50.000372
ORF1ab/nsp3724T724IaCcaTc1818B.1.1600.000561
ORF1ab/nsp3724T724IaCcaTc1717B.1.1.4860.026814
ORF1ab/nsp3724T724IaCcaTc1616B.1.4270.000808
ORF1ab/nsp3724T724IaCcaTc1515AY.1190.00053
ORF1ab/nsp3724T724IaCcaTc1515B.1.5950.003914
ORF1ab/nsp3724T724IaCcaTc1414B.1.177.540.00849
ORF1ab/nsp3724T724IaCcaTc1414B.1.2210.000994
ORF1ab/nsp3724T724IaCcaTc1414P.1.40.013672
ORF1ab/nsp3724T724IaCcaTc1313P.1.140.000621
ORF1ab/nsp3724T724IaCcaTc1212AY.620.005229
ORF1ab/nsp3724T724IaCcaTc1111AY.470.000342
ORF1ab/nsp3724T724IaCcaTc1111B.1.1.2940.013924
ORF1ab/nsp3724T724IaCcaTc1111B.1.2340.001451
ORF1ab/nsp3724T724IaCcaTc1111B.1.360.001605
ORF1ab/nsp3724T724IaCcaTc1010AY.530.002875
ORF1ab/nsp3724T724IaCcaTc1010B.1.2580.000665
ORF1ab/nsp3724T724IaCcaTc1010B.1.6370.000731
ORF1ab/nsp3724T724IaCcaTc1010R.10.0009
ORF1ab/nsp3724T724IaCcaTc99AY.230.000628
ORF1ab/nsp3724T724IaCcaTc99AY.290.000142
ORF1ab/nsp3724T724IaCcaTc99AY.9.20.000331
ORF1ab/nsp3724T724IaCcaTc88AY.330.000534
ORF1ab/nsp3724T724IaCcaTc88AY.4.20.000174
ORF1ab/nsp3724T724IaCcaTc88AY.840.0035
ORF1ab/nsp3724T724IaCcaTc88B.1.177.440.004152
ORF1ab/nsp3724T724IaCcaTc88B.1.595.20.32
ORF1ab/nsp3724T724IaCcaTc77A.2.50.003493
ORF1ab/nsp3724T724IaCcaTc77AY.690.001307
ORF1ab/nsp3724T724IaCcaTc77B.1.5260.000165
ORF1ab/nsp3724T724IaCcaTc66AY.390.000148
ORF1ab/nsp3724T724IaCcaTc66AY.46.40.000987
ORF1ab/nsp3724T724IaCcaTc66AY.7.10.000676
ORF1ab/nsp3724T724IaCcaTc66B.1.1.3010.007075
ORF1ab/nsp3724T724IaCcaTc66B.1.2430.000418
ORF1ab/nsp3724T724IaCcaTc66B.1.438.10.000644
ORF1ab/nsp3724T724IaCcaTc66P.20.00112
ORF1ab/nsp3724T724IaCcaTc55AY.940.002213
ORF1ab/nsp3724T724IaCcaTc55AY.99.20.000461
ORF1ab/nsp3724T724IaCcaTc55B.1.1.250.002843
ORF1ab/nsp3724T724IaCcaTc55B.1.6210.000443
ORF1ab/nsp3724T724IaCcaTc55B.1.6310.016835
ORF1ab/nsp3724T724IaCcaTc44AY.410.001176
ORF1ab/nsp3724T724IaCcaTc44AY.60.000165
ORF1ab/nsp3724T724IaCcaTc44AY.650.002132
ORF1ab/nsp3724T724IaCcaTc44AY.750.000224
ORF1ab/nsp3724T724IaCcaTc44B0.000511
ORF1ab/nsp3724T724IaCcaTc44B.1.1.3170.001647
ORF1ab/nsp3724T724IaCcaTc44B.1.1.330.001684
ORF1ab/nsp3724T724IaCcaTc44B.1.1110.0047
ORF1ab/nsp3724T724IaCcaTc44B.1.1280.002541
ORF1ab/nsp3724T724IaCcaTc44B.1.3510.000119
ORF1ab/nsp3724T724IaCcaTc44B.1.4280.004082
ORF1ab/nsp3724T724IaCcaTc44B.1.6200.003784
ORF1ab/nsp3724T724IaCcaTc33AY.1170.000254
ORF1ab/nsp3724T724IaCcaTc33AY.1200.000112
ORF1ab/nsp3724T724IaCcaTc33AY.520.002443
ORF1ab/nsp3724T724IaCcaTc33AY.610.000314
ORF1ab/nsp3724T724IaCcaTc33AY.90.000203
ORF1ab/nsp3724T724IaCcaTc33B.1.177.510.013699
ORF1ab/nsp3724T724IaCcaTc33B.1.177.620.003576
ORF1ab/nsp3724T724IaCcaTc33B.1.258.30.005025
ORF1ab/nsp3724T724IaCcaTc33B.1.3610.003866
ORF1ab/nsp3724T724IaCcaTc33B.1.3960.002117
ORF1ab/nsp3724T724IaCcaTc33B.1.4560.009804
ORF1ab/nsp3724T724IaCcaTc33B.1.5090.002597
ORF1ab/nsp3724T724IaCcaTc33B.1.930.002801
ORF1ab/nsp3724T724IaCcaTc33C.36.30.001702
ORF1ab/nsp3724T724IaCcaTc22AY.1110.000366
ORF1ab/nsp3724T724IaCcaTc22AY.240.000862
ORF1ab/nsp3724T724IaCcaTc22AY.260.000057
ORF1ab/nsp3724T724IaCcaTc22AY.270.000129
ORF1ab/nsp3724T724IaCcaTc22AY.340.000194
ORF1ab/nsp3724T724IaCcaTc22AY.4.30.001684
ORF1ab/nsp3724T724IaCcaTc22AY.450.000243
ORF1ab/nsp3724T724IaCcaTc22AY.460.000208
ORF1ab/nsp3724T724IaCcaTc22AY.46.30.001867
ORF1ab/nsp3724T724IaCcaTc22AY.75.10.000361
ORF1ab/nsp3724T724IaCcaTc22AY.900.001369
ORF1ab/nsp3724T724IaCcaTc22AY.920.000575
ORF1ab/nsp3724T724IaCcaTc22AY.960.004149
ORF1ab/nsp3724T724IaCcaTc22B.1.1.1170.019417
ORF1ab/nsp3724T724IaCcaTc22B.1.1.1890.003026
ORF1ab/nsp3724T724IaCcaTc22B.1.1.2140.000111
ORF1ab/nsp3724T724IaCcaTc22B.1.1.2160.001781
ORF1ab/nsp3724T724IaCcaTc22B.1.1.280.000622
ORF1ab/nsp3724T724IaCcaTc22B.1.1.3720.001377
ORF1ab/nsp3724T724IaCcaTc22B.1.1.3790.0625
ORF1ab/nsp3724T724IaCcaTc22B.1.1.4320.002532
ORF1ab/nsp3724T724IaCcaTc22B.1.1.670.009132
ORF1ab/nsp3724T724IaCcaTc22B.1.1570.00597
ORF1ab/nsp3724T724IaCcaTc22B.1.177.580.002663
ORF1ab/nsp3724T724IaCcaTc22B.1.177.600.000437
ORF1ab/nsp3724T724IaCcaTc22B.1.2650.002541
ORF1ab/nsp3724T724IaCcaTc22B.1.3690.00057
ORF1ab/nsp3724T724IaCcaTc22B.1.4040.002604
ORF1ab/nsp3724T724IaCcaTc22B.1.5380.016129
ORF1ab/nsp3724T724IaCcaTc22B.1.564.10.003155
ORF1ab/nsp3724T724IaCcaTc22B.1.5960.000174
ORF1ab/nsp3724T724IaCcaTc22C.230.011628
ORF1ab/nsp3724T724IaCcaTc22N.50.003534
ORF1ab/nsp3724T724IaCcaTc22P.1.170.000324
ORF1ab/nsp3724T724IaCcaTc22Q.10.000253
ORF1ab/nsp3724T724IaCcaTc22Q.30.00029
ORF1ab/nsp3724T724IaCcaTc11A0.000387
ORF1ab/nsp3724T724IaCcaTc11A.20.000662
ORF1ab/nsp3724T724IaCcaTc11A.2.20.001689
ORF1ab/nsp3724T724IaCcaTc11AY.100.00053
ORF1ab/nsp3724T724IaCcaTc11AY.1000.000046
ORF1ab/nsp3724T724IaCcaTc11AY.1010.00049
ORF1ab/nsp3724T724IaCcaTc11AY.1130.000142
ORF1ab/nsp3724T724IaCcaTc11AY.116.10.000311
ORF1ab/nsp3724T724IaCcaTc11AY.1180.000063
ORF1ab/nsp3724T724IaCcaTc11AY.130.000161
ORF1ab/nsp3724T724IaCcaTc11AY.3.10.000085
ORF1ab/nsp3724T724IaCcaTc11AY.300.000396
ORF1ab/nsp3724T724IaCcaTc11AY.39.10.00004
ORF1ab/nsp3724T724IaCcaTc11AY.4.2.10.000149
ORF1ab/nsp3724T724IaCcaTc11AY.4.50.000107
ORF1ab/nsp3724T724IaCcaTc11AY.420.00004
ORF1ab/nsp3724T724IaCcaTc11AY.46.10.001027
ORF1ab/nsp3724T724IaCcaTc11AY.540.000095
ORF1ab/nsp3724T724IaCcaTc11AY.550.000917
ORF1ab/nsp3724T724IaCcaTc11AY.680.000274
ORF1ab/nsp3724T724IaCcaTc11AY.740.000116
ORF1ab/nsp3724T724IaCcaTc11AY.790.001211
ORF1ab/nsp3724T724IaCcaTc11AY.850.000427
ORF1ab/nsp3724T724IaCcaTc11AY.9.10.000084
ORF1ab/nsp3724T724IaCcaTc11AY.930.000273
ORF1ab/nsp3724T724IaCcaTc11AY.98.10.000048
ORF1ab/nsp3724T724IaCcaTc11AZ.30.00152
ORF1ab/nsp3724T724IaCcaTc11B.1.1.1420.017544
ORF1ab/nsp3724T724IaCcaTc11B.1.1.1530.001095
ORF1ab/nsp3724T724IaCcaTc11B.1.1.1610.003534
ORF1ab/nsp3724T724IaCcaTc11B.1.1.1940.00495
ORF1ab/nsp3724T724IaCcaTc11B.1.1.2400.004695
ORF1ab/nsp3724T724IaCcaTc11B.1.1.2530.002506
ORF1ab/nsp3724T724IaCcaTc11B.1.1.3060.000438
ORF1ab/nsp3724T724IaCcaTc11B.1.1.3110.000358
ORF1ab/nsp3724T724IaCcaTc11B.1.1.3160.000925
ORF1ab/nsp3724T724IaCcaTc11B.1.1.3620.005618
ORF1ab/nsp3724T724IaCcaTc11B.1.1.3690.000446
ORF1ab/nsp3724T724IaCcaTc11B.1.1.370.000193
ORF1ab/nsp3724T724IaCcaTc11B.1.1.390.00051
ORF1ab/nsp3724T724IaCcaTc11B.1.1.4190.007407
ORF1ab/nsp3724T724IaCcaTc11B.1.1.4280.009434
ORF1ab/nsp3724T724IaCcaTc11B.1.1.4400.011765
ORF1ab/nsp3724T724IaCcaTc11B.1.1.510.001718
ORF1ab/nsp3724T724IaCcaTc11B.1.1.5250.005464
ORF1ab/nsp3724T724IaCcaTc11B.1.1.5260.003546
ORF1ab/nsp3724T724IaCcaTc11B.1.1.570.011494
ORF1ab/nsp3724T724IaCcaTc11B.1.1.630.000386
ORF1ab/nsp3724T724IaCcaTc11B.1.1260.001276
ORF1ab/nsp3724T724IaCcaTc11B.1.1640.014925
ORF1ab/nsp3724T724IaCcaTc11B.1.177.210.000076
ORF1ab/nsp3724T724IaCcaTc11B.1.177.310.011494
ORF1ab/nsp3724T724IaCcaTc11B.1.177.520.001757
ORF1ab/nsp3724T724IaCcaTc11B.1.177.570.000281
ORF1ab/nsp3724T724IaCcaTc11B.1.177.60.000977
ORF1ab/nsp3724T724IaCcaTc11B.1.177.750.001041
ORF1ab/nsp3724T724IaCcaTc11B.1.177.810.000189
ORF1ab/nsp3724T724IaCcaTc11B.1.177.820.000477
ORF1ab/nsp3724T724IaCcaTc11B.1.177.860.000183
ORF1ab/nsp3724T724IaCcaTc11B.1.2060.000816
ORF1ab/nsp3724T724IaCcaTc11B.1.221.20.004016
ORF1ab/nsp3724T724IaCcaTc11B.1.258.110.000396
ORF1ab/nsp3724T724IaCcaTc11B.1.258.170.000104
ORF1ab/nsp3724T724IaCcaTc11B.1.264.10.047619
ORF1ab/nsp3724T724IaCcaTc11B.1.2810.021739
ORF1ab/nsp3724T724IaCcaTc11B.1.3140.007519
ORF1ab/nsp3724T724IaCcaTc11B.1.3190.003049
ORF1ab/nsp3724T724IaCcaTc11B.1.3200.001245
ORF1ab/nsp3724T724IaCcaTc11B.1.3400.004292
ORF1ab/nsp3724T724IaCcaTc11B.1.3490.000715
ORF1ab/nsp3724T724IaCcaTc11B.1.3770.004566
ORF1ab/nsp3724T724IaCcaTc11B.1.4180.015873
ORF1ab/nsp3724T724IaCcaTc11B.1.4320.011236
ORF1ab/nsp3724T724IaCcaTc11B.1.466.10.007194
ORF1ab/nsp3724T724IaCcaTc11B.1.466.20.000391
ORF1ab/nsp3724T724IaCcaTc11B.1.5010.007353
ORF1ab/nsp3724T724IaCcaTc11B.1.5170.000427
ORF1ab/nsp3724T724IaCcaTc11B.1.5240.001406
ORF1ab/nsp3724T724IaCcaTc11B.1.5300.007143
ORF1ab/nsp3724T724IaCcaTc11B.1.5610.000397
ORF1ab/nsp3724T724IaCcaTc11B.1.5640.000426
ORF1ab/nsp3724T724IaCcaTc11B.1.5760.000907
ORF1ab/nsp3724T724IaCcaTc11B.1.5820.000491
ORF1ab/nsp3724T724IaCcaTc11B.1.5880.00091
ORF1ab/nsp3724T724IaCcaTc11B.1.617.10.000129
ORF1ab/nsp3724T724IaCcaTc11B.1.617.30.002985
ORF1ab/nsp3724T724IaCcaTc11B.1.6230.000536
ORF1ab/nsp3724T724IaCcaTc11B.1.6330.041667
ORF1ab/nsp3724T724IaCcaTc11C.370.000116
ORF1ab/nsp3724T724IaCcaTc11D.20.000075
ORF1ab/nsp3724T724IaCcaTc11K.30.006173
ORF1ab/nsp3724T724IaCcaTc11N.40.004255
ORF1ab/nsp3724T724IaCcaTc11N.90.005952
ORF1ab/nsp3724T724IaCcaTc11P.1.10.000318
ORF1ab/nsp3724T724IaCcaTc11P.1.120.000484
ORF1ab/nsp3724T724IaCcaTc11P.1.150.000232
ORF1ab/nsp3724T724IaCcaTc11Q.40.000455
ORF1ab/nsp3724T724IaCcaTc11Q.80.000165