CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T678del2

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3678T678del2T1496del2delACa--a430.754751-4753
ORF1ab/nsp3678T678del2T1496del2delaCAa--410.254751-4753

Details of the mutation T678del2 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3678T678del2ACa--a34All0.000001
ORF1ab/nsp3678T678del2aCAa--14All0
ORF1ab/nsp3678T678del2ACa--a220.111111
ORF1ab/nsp3678T678del2aCAa--11AY.40.000002
ORF1ab/nsp3678T678del2ACa--a11B.1.177.690.001484