CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T678del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3678T678delT1496deldelACA---636314751-4753

Details of the mutation T678del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3678T678delACA---6363All0.000012
ORF1ab/nsp3678T678delACA---2020B.1.1.70.000018
ORF1ab/nsp3678T678delACA---220.111111
ORF1ab/nsp3678T678delACA---22AY.40.000003
ORF1ab/nsp3678T678delACA---22AY.4.50.000215
ORF1ab/nsp3678T678delACA---22AY.440.000012
ORF1ab/nsp3678T678delACA---22B.10.000018
ORF1ab/nsp3678T678delACA---22B.1.360.000292
ORF1ab/nsp3678T678delACA---22B.1.617.20.000008
ORF1ab/nsp3678T678delACA---22B.1.6190.001742
ORF1ab/nsp3678T678delACA---22P.10.000032
ORF1ab/nsp3678T678delACA---11A.2.20.001689
ORF1ab/nsp3678T678delACA---11AY.1130.000142
ORF1ab/nsp3678T678delACA---11AY.1200.000037
ORF1ab/nsp3678T678delACA---11AY.250.000006
ORF1ab/nsp3678T678delACA---11AY.990.001049
ORF1ab/nsp3678T678delACA---11B.1.10.000018
ORF1ab/nsp3678T678delACA---11B.1.1.1420.017544
ORF1ab/nsp3678T678delACA---11B.1.1.4090.002833
ORF1ab/nsp3678T678delACA---11B.1.1490.003425
ORF1ab/nsp3678T678delACA---11B.1.1570.002985
ORF1ab/nsp3678T678delACA---11B.1.160.70.002079
ORF1ab/nsp3678T678delACA---11B.1.1770.000013
ORF1ab/nsp3678T678delACA---11B.1.177.40.000211
ORF1ab/nsp3678T678delACA---11B.1.177.500.004695
ORF1ab/nsp3678T678delACA---11B.1.177.630.002703
ORF1ab/nsp3678T678delACA---11B.1.177.810.000189
ORF1ab/nsp3678T678delACA---11B.1.2100.002132
ORF1ab/nsp3678T678delACA---11B.1.2430.00007
ORF1ab/nsp3678T678delACA---11B.1.2580.000067
ORF1ab/nsp3678T678delACA---11B.1.3190.003049
ORF1ab/nsp3678T678delACA---11B.1.3510.00003
ORF1ab/nsp3678T678delACA---11B.1.617.10.000129
ORF1ab/nsp3678T678delACA---11B.1.6210.000089
ORF1ab/nsp3678T678delACA---11B.150.017544
ORF1ab/nsp3678T678delACA---11P.1.10.000318