CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = T678T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3678T678TT1496TsynacAacG1131040.9203544751-4753
ORF1ab/nsp3678T678TT1496TsynacAacT11360.05309734751-4753
ORF1ab/nsp3678T678TT1496TsynacAacC11330.02654874751-4753

Details of the mutation T678T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3678T678TacAacG104113All0.00002
ORF1ab/nsp3678T678TacAacT6113All0.000001
ORF1ab/nsp3678T678TacAacC3113All0.000001
ORF1ab/nsp3678T678TacAacG7072B.1.1.70.000063
ORF1ab/nsp3678T678TacAacT272B.1.1.70.000002
ORF1ab/nsp3678T678TacAacG77AY.260.000198
ORF1ab/nsp3678T678TacAacG34AY.430.000013
ORF1ab/nsp3678T678TacAacT14AY.430.000004
ORF1ab/nsp3678T678TacAacG34B.1.617.20.000011
ORF1ab/nsp3678T678TacAacT14B.1.617.20.000004
ORF1ab/nsp3678T678TacAacG33AY.1030.000019
ORF1ab/nsp3678T678TacAacG33AY.40.000005
ORF1ab/nsp3678T678TacAacC23B.10.000018
ORF1ab/nsp3678T678TacAacT13B.10.000009
ORF1ab/nsp3678T678TacAacG22AY.1140.000462
ORF1ab/nsp3678T678TacAacG22AY.250.000012
ORF1ab/nsp3678T678TacAacG22AY.390.000049
ORF1ab/nsp3678T678TacAacG22AY.440.000012
ORF1ab/nsp3678T678TacAacG22B.1.10.000036
ORF1ab/nsp3678T678TacAacT11AY.1020.000027
ORF1ab/nsp3678T678TacAacG11AY.130.000161
ORF1ab/nsp3678T678TacAacG11AY.420.00004
ORF1ab/nsp3678T678TacAacG11B.1.1.280.000311
ORF1ab/nsp3678T678TacAacC11B.1.20.000009
ORF1ab/nsp3678T678TacAacG11B.1.4560.003268
ORF1ab/nsp3678T678TacAacG11P.10.000016